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Aswendt_Lab
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2024_Ruthe_SND
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2024_Ruthe_SND
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code
arefks 2e82796756 added viraltracin 2 mtpl space filp function 8 mēneši atpakaļ
..
.ipynb_checkpoints e8e54e0207 current state: code is finished for representation 9 mēneši atpakaļ
AIDAmri @ 8e7f9d3597 13cb663094 added all of the code necessery 9 mēneši atpakaļ
mouse_connectivity e8e54e0207 current state: code is finished for representation 9 mēneši atpakaļ
Big_data_mouse_practical_2020_answer.ipynb e8e54e0207 current state: code is finished for representation 9 mēneši atpakaļ
GetQuantitativeValues.py 71bbf47330 corrected bugs 8 mēneši atpakaļ
ProofOfModalities.py 2e82796756 added viraltracin 2 mtpl space filp function 8 mēneši atpakaļ
README.md 13cb663094 added all of the code necessery 9 mēneši atpakaļ
mask2MTPL.py 13cb663094 added all of the code necessery 9 mēneši atpakaļ
overlayPlot.py 86fce3a119 current state: code is finished for representation 9 mēneši atpakaļ
overlayPlot3D.py 13cb663094 added all of the code necessery 9 mēneši atpakaļ
register_masks.py ca2cbb7a6e adjusted code 8 mēneši atpakaļ
viralTracing2MTPL.py 2e82796756 added viraltracin 2 mtpl space filp function 8 mēneši atpakaļ

README.md

AIDAmri code

This is the code used to process raw Bruker data and to apply transformations from the drawn masks to each individual subject. Note that this is a subdataset linked to the GitHub page of AIDAmri.

The link to the exact branch of the code which was used for this process is: AIDAmri - SND_Mask_trafu branch.

Example usage of code

root@9c22c56092e5:/aida/DATA/code# python mask2MTPL.py -i /aida/DATA/output/Tract_Density -o /aida/DATA/output/Nifti_Tract_density_registered