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arefks 2e82796756 added viraltracin 2 mtpl space filp function il y a 6 mois
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.ipynb_checkpoints e8e54e0207 current state: code is finished for representation il y a 7 mois
AIDAmri @ 8e7f9d3597 13cb663094 added all of the code necessery il y a 7 mois
mouse_connectivity e8e54e0207 current state: code is finished for representation il y a 7 mois
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GetQuantitativeValues.py 71bbf47330 corrected bugs il y a 6 mois
ProofOfModalities.py 2e82796756 added viraltracin 2 mtpl space filp function il y a 6 mois
README.md 13cb663094 added all of the code necessery il y a 7 mois
mask2MTPL.py 13cb663094 added all of the code necessery il y a 7 mois
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overlayPlot3D.py 13cb663094 added all of the code necessery il y a 7 mois
register_masks.py ca2cbb7a6e adjusted code il y a 7 mois
viralTracing2MTPL.py 2e82796756 added viraltracin 2 mtpl space filp function il y a 6 mois

README.md

AIDAmri code

This is the code used to process raw Bruker data and to apply transformations from the drawn masks to each individual subject. Note that this is a subdataset linked to the GitHub page of AIDAmri.

The link to the exact branch of the code which was used for this process is: AIDAmri - SND_Mask_trafu branch.

Example usage of code

root@9c22c56092e5:/aida/DATA/code# python mask2MTPL.py -i /aida/DATA/output/Tract_Density -o /aida/DATA/output/Nifti_Tract_density_registered