Data for Doron, Shin, et al., "Perirhinal input to neocortical layer 1 controls learning".

jiyunshin 069e26565a gin commit from DESKTOP-593CF0Q 3 gadi atpakaļ
Figure 1 3b1664652a Update 'Figure 1/README.md' 3 gadi atpakaļ
Figure 2 5cf7fad4b3 Add 'Figure 2/README.md' 3 gadi atpakaļ
Figure 3 1924576541 Update 'Figure 3/README.md' 3 gadi atpakaļ
Figure 4 71dfea901d Update 'Figure 4/README.md' 3 gadi atpakaļ
Figure S1 d2d6b9eb63 Update 'Figure S1/README.md' 3 gadi atpakaļ
Figure S2 26139554eb Update 'Figure S2/README.md' 3 gadi atpakaļ
Figure S3 4fb16a7bef Add 'Figure S3/README.md' 3 gadi atpakaļ
Figure S4 3fe73aff32 Update 'Figure S4/README.md' 3 gadi atpakaļ
Figure S5 08169398e0 Update 'Figure S5/README.md' 3 gadi atpakaļ
Figure S6 90a4bf4895 Add 'Figure S6/README.md' 3 gadi atpakaļ
Figure S7 019e0cb509 gin commit from DESKTOP-593CF0Q 3 gadi atpakaļ
Figure S9 9216ad9d31 Add 'Figure S9/README.md' 3 gadi atpakaļ
codes 069e26565a gin commit from DESKTOP-593CF0Q 3 gadi atpakaļ
.gitignore 1008b33c31 Initial commit 3 gadi atpakaļ
GIN_sync_UNIX bea04c20d6 gin commit from Amo.local 3 gadi atpakaļ
GIN_sync_windows.bat bea04c20d6 gin commit from Amo.local 3 gadi atpakaļ
LICENSE 1008b33c31 Initial commit 3 gadi atpakaļ
README.md fa32458d0c Update 'README.md' 3 gadi atpakaļ
datacite.yml 1edbc967c7 Update 'datacite.yml' 3 gadi atpakaļ

README.md

Data for: "Perirhinal input to neocortical layer I controls learning"

Guy Doron, Jiyun N. Shin, Naoya Takahashi, Moritz Drüke, Christina Bocklisch, Salina Skenderi, Lisa de Mont, Maria Toumazou, Julia Ledderose, Michael Brecht, Richard Naud, and Matthew E. Larkum

This repository contains behavioral, electrophysiological, functional imaging (two-photon imaging) and anatomical data that were used to generate figures in our paper "Perirhinal input to neocortical layer I controls learning" by Doron, Shin et al., 2020 (doi: TBA).

Abstract

Hippocampal output influences memory formation in the neocortex but this process is poorly understood because the precise anatomical location and the underlying cellular mechanisms remain elusive. Here, we show that perirhinal input, predominantly to sensory cortical layer 1 (L1), controls hippocampal-dependent associative learning. This process was marked by the emergence of distinct firing responses in defined subpopulations of L5 pyramidal neurons whose tuft dendrites receive perirhinal inputs in L1. Learning correlated with burst firing and enhancement of dendritic excitability and was suppressed by disruption of dendritic activity. Furthermore, bursts, but not regular spike trains, were sufficient to retrieve learned behavior. We conclude that hippocampal information arriving at L5 tuft dendrites in neocortical L1 mediates memory formation in the neocortex.

Contents

Each folder contains pre-processed data (.mat or .xlsx files) to reproduce corresponding figures. The details of the data are documented in README.md inside the folders. Codes folder contains relevant codes used in this study.

datacite.yml
Title Perirhinal input to neocortical layer 1 controls learning
Authors Doron,Guy;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID: 0000-0003-1252-5747
Shin,Jiyun N.;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID: 0000-0002-0534-6938
Takahashi,Naoya;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID: 0000-0002-6008-4627
Drüke,Moritz;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID: 0000-0002-6787-9377
Bocklisch,Christina;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID:
Skenderi,Salina;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID: 0000-0003-4779-4541
de Mont,Lisa;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID: 0000-0003-3829-0712
Toumazou,Maria;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID:
Ledderose,Julia;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID: 0000-0001-5458-6287
Brecht,Michael;Institut für Biologie, House 6, Philippstr. 13, Humboldt Universität, Berlin, 10115 Germany.;ORCID: 0000-0002-5387-0953
Naud,Richard;uOttawa Brain and Mind Institute, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, K1H 8M5, Canada.;ORCID: 0000-0001-7383-3095
Larkum,Matthew E.;Institut für Biologie, Neurocure Center for Excellence, Chariteplatz 1 / Virchowweg 6, Charité Universitätsmedizin Berlin & Humboldt Universität, Berlin, 10117 Germany.;ORCID: 0000-0001-9799-2656
Description This repository contains behavioral, electrophysiological, functional imaging (two-photon imaging) and anatomical data that support our findings on the functional role of perirhinal input to neocortical layer 1 on learning.
License Creative Commons Attribution 4.0 International Public License (https://creativecommons.org/licenses/by/4.0/)
References PublicationName1 [doi:10.xxx/zzzz] (IsSupplementTo)
PublicationName2 [arxiv:mmmm.nnnn] (IsSupplementTo)
PublicationName3 [pmid:nnnnnnnn] (IsReferencedBy)
Funding DFG, EXC 257 NeuroCure
DFG, DFG.327654276 (SFB 1315)
EU, EU.785907 (HBP SGA2)
EU, EU.670118 (Active Cortex)
NSERC, Discovery grant
CIHR, Project grant
Keywords Neuroscience
Electrophysiology
Behavior
Learning and memory
Neocortex
Dendrites
L5 pyramidal neuron
Perirhinal cortex
Layer 1
Resource Type Dataset