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studyforrest-ppa-srm
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Christian O. Häusler 0b3aab1003 add python 3.7 venv 8 months ago
..
__pycache__ 537ec90433 add scripts for t-test of correlations 2 years ago
localpython 0b3aab1003 add python 3.7 venv 8 months ago
.gitattributes 9487e4872a Apply YODA dataset setup 3 years ago
README.md 916574e9ea Apply YODA dataset setup 3 years ago
corrstats.py 537ec90433 add scripts for t-test of correlations 2 years ago
create-roi-overlaps.sh 67142e8c54 add script to create union of visual rois (Sengupta et al., 2016) 3 years ago
data_mask_concat_jobs.sh b8e355a338 change datalad run message 1 year ago
data_mask_concat_runs.py d95905c64f refactoring of preprocessing script v2 1 year ago
data_mask_concat_runs.submit adfa33637d add scripts to send masks & concats 4D data to HTcondor 3 years ago
data_srm_fitting.py e7ddf0f651 adjust scripts to not write to test directory 10 months ago
data_srm_fitting.submit e7ddf0f651 adjust scripts to not write to test directory 10 months ago
data_srm_fitting_venv.sh e7ddf0f651 adjust scripts to not write to test directory 10 months ago
get_wmatrix_for_left-out.py e886d0b7ad clean scripts to be run on a cluster 11 months ago
get_wmatrix_for_left-out.submit e7ddf0f651 adjust scripts to not write to test directory 10 months ago
get_wmatrix_for_left-out_venv.sh e7ddf0f651 adjust scripts to not write to test directory 10 months ago
grand_mean_for_4d.py aaeab67c35 save normalized runs (AV, AO, VIS) per subject 2 years ago
grand_mean_for_4d.submit 4da9abe9b2 rename to grand_mean_for_4d 2 years ago
masks-builder-voxel-counter.py c281121e32 update masks-builder-voxel-counter.py 3 years ago
masks-from-mni-to-bold3Tp2.py 34de58345d some revision of parameters & pathes in scripts 2 years ago
masks-from-t1w-to-bold3Tp2.py ef39ea4539 update masks-from-t1w-to-bold3Tp2.py 3 years ago
plot_bland-altman.py 671d4787bb add script for plotting stripplot of correlations 2 years ago
plot_corr-emp-vs-estimation.py 135d832fb1 ouput plots only as pdf 9 months ago
plot_corr-of-glm-and-srm.py 135d832fb1 ouput plots only as pdf 9 months ago
plot_cronbachs.py 135d832fb1 ouput plots only as pdf 9 months ago
plot_srm.py 135d832fb1 ouput plots only as pdf 9 months ago
plot_voxel-counts.py 135d832fb1 ouput plots only as pdf 9 months ago
predict_ppa.py 11ffb9fdc4 allow to speak of minutes (and not just TRs) 11 months ago
predict_ppa.submit e7ddf0f651 adjust scripts to not write to test directory 10 months ago
predict_ppa_other-nfeat.submit 6a1dd968b8 allow plotting of non-5-dimensional CFSs results 10 months ago
predict_ppa_venv.sh 657713c779 set FSL variables 10 months ago
statistics_cronbachs.py e7ddf0f651 adjust scripts to not write to test directory 10 months ago
statistics_t-test-correlations.py e7ddf0f651 adjust scripts to not write to test directory 10 months ago

README.md

All custom code goes into this directory. All scripts should be written such that they can be executed from the root of the dataset, and are only using relative paths for portability.