We use cookies to ensure you get the best experience on our website
Domovská stránka Prehľadávať Pomoc News
Registrovať Prihlásiť sa

Scheduled service maintenance on November 22

On Friday, November 22, 2024, between 06:00 CET and 18:00 CET, GIN services will undergo planned maintenance. Extended service interruptions should be expected. We will try to keep downtimes to a minimum, but recommend that users avoid critical tasks, large data uploads, or DOI requests during this time.

We apologize for any inconvenience.

Aswendt_Lab
/
2024_Ruthe_SND
8
0
Fork 0
Súbory Issues 0 Pull requesty 0 Wiki
Strom: 83bbe1278b
Branche Tagy
2024_Ruthe_SND
/
output
arefks 83bbe1278b merged behavior data with quantitaitve dti values and corrolated between them with corrections 7 mesiacov pred
..
4Presentation 565a9fd388 I added a folder with data from ImageJ 9 mesiacov pred
Correlation_with_behavior 83bbe1278b merged behavior data with quantitaitve dti values and corrolated between them with corrections 7 mesiacov pred
Final_Quantitative_output 83bbe1278b merged behavior data with quantitaitve dti values and corrolated between them with corrections 7 mesiacov pred
ImageJ ded8d8732e I added all overlay pictures from ImageJ 7 mesiacov pred
MaskComparisons 9bcdec0ea4 added overlap percentage csv 7 mesiacov pred
Tract_Density_Map 3a7f02f1c4 temp 8 mesiacov pred
Tract_Density_Map_registered 0332ba78b3 imagJ 8 mesiacov pred
Tract_Mask_NIFTI e011377213 I added all fiber tracts as tt.gz file 7 mesiacov pred
Tract_Mask_registered 0332ba78b3 imagJ 8 mesiacov pred
Tract_Mask_tt e011377213 I added all fiber tracts as tt.gz file 7 mesiacov pred
Viral_tracing_flipped 2e82796756 added viraltracin 2 mtpl space filp function 8 mesiacov pred
behavior_analysis 83bbe1278b merged behavior data with quantitaitve dti values and corrolated between them with corrections 7 mesiacov pred
del 2e7526154b I updated all tract masks and added the extrapyramidal tract masks as well as some variations of the CST and thalamocortical tracking. 8 mesiacov pred
figures b1629b4c36 deleted some files 9 mesiacov pred
C57BL6_mouse.iso_registerd.nii.gz 45782701c4 updated input and output 10 mesiacov pred
Overlap_metrics_of_VT_and_dwi_masks.csv 9bcdec0ea4 added overlap percentage csv 7 mesiacov pred
README.md a0f2377f45 I updated the READme file for Outputs 9 mesiacov pred
affineTrafo.txt 45782701c4 updated input and output 10 mesiacov pred

README.md

Outputs

  • Nifti_Trakte: Contains all manually drawn masks created with DSI Studio.
  • Nifti_Trakte_registered: Contains the masks registered to our in-house MRI template (MTPL). This registration was performed manually using reg_aladin and reg_resample.
  • affineTrafo.txt: This is the output transformation matrix generated by reg_aladin during the registration of the C57BL6_mouse.iso.nii.gz file to the NP_template_sc0.nii.gz.
  • C57BL6_mouse.iso_registered.nii.gz: This is the output image created by reg_aladin when registering the C57BL6_mouse.iso.nii.gz file to the NP_template_sc0.nii.gz.
  • Nifti_Trakte_V2: These are the updated tracts (NV).
  • Tract_Density: This folder contains the density of each generated tract mask, saved from DSI-Studio.