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I updated all tract masks and added the extrapyramidal tract masks as well as some variations of the CST and thalamocortical tracking.

lucaruthe 2 bulan lalu
induk
4010186317
melakukan
2e7526154b
52 mengubah file dengan 2 tambahan dan 2 penghapusan
Tampilan Split Tampilkan Statistik Diff
  1. 0 0
      output/Tract_Density_Map/CC_masks_cut/CC_MOp(dilated)_cut.nii.gz.nii
  2. 0 0
      output/Tract_Density_Map/CC_masks_cut/CC_MOp_MOp_cut.nii.gz.nii
  3. 0 0
      output/Tract_Density_Map/CC_masks_cut/CC_MOs_MOs_cut.nii.gz.nii
  4. 0 0
      output/Tract_Density_Map/CC_masks_cut/CC_SSp_ll_cut.nii.gz.nii
  5. 0 0
      output/Tract_Density_Map/CC_masks_cut/CC_SSp_ul_cut.nii.gz.nii
  6. 0 0
      output/Tract_Density_Map/CC_masks_not_cut/CC_MOp(dilated).gz.nii
  7. 0 0
      output/Tract_Density_Map/CC_masks_not_cut/CC_MOp_MOp.gz.nii
  8. 0 0
      output/Tract_Density_Map/CC_masks_not_cut/CC_MOs_MOs.gz.nii
  9. 0 0
      output/Tract_Density_Map/CC_masks_not_cut/CC_SSp_ll.gz.nii
  10. 0 0
      output/Tract_Density_Map/CC_masks_not_cut/CC_SSp_ul.gz.nii
  11. 0 0
      output/Tract_Density_Map/CST_masks/CST_links.gz.nii
  12. 0 0
      output/Tract_Density_Map/CST_masks/CST_rechts.gz.nii
  13. 0 0
      output/Tract_Density_Map/Optic_tract_mask/Optic_tract_final.nii.gz.nii
  14. 0 0
      output/Tract_Density_Map/Thalamocortical_tract_masks/Thalamocorticale_links.gz.nii
  15. 0 0
      output/Tract_Density_Map/Thalamocortical_tract_masks/Thalamocorticale_rechts.gz.nii
  16. 0 1
      output/Tract_Density_Map_registered/Optic_Tract_links_registered.nii.gz_registered.nii
  17. 0 1
      output/Tract_Density_Map_registered/Optic_Tract_rechts_registered.nii.gz_registered.nii
  18. 0 0
      output/Tract_Mask_updated/CC_masks_cut/CC_MOp(dilated)_cut.tt.nii
  19. 0 0
      output/Tract_Mask_updated/CC_masks_cut/CC_MOp_MOp_cut.tt.nii
  20. 0 0
      output/Tract_Mask_updated/CC_masks_cut/CC_MOs_MOs_cut.tt.nii
  21. 0 0
      output/Tract_Mask_updated/CC_masks_cut/CC_SSp_ll_cut.tt.nii
  22. 0 0
      output/Tract_Mask_updated/CC_masks_cut/CC_SSp_ul_cut.tt.nii
  23. 0 0
      output/Tract_Mask_updated/CC_masks_not_cut/CC_MOp(dilated).nii
  24. 0 0
      output/Tract_Mask_updated/CC_masks_not_cut/CC_MOp_MOp.tt.nii
  25. 0 0
      output/Tract_Mask_updated/CC_masks_not_cut/CC_MOs_MOs.tt.nii
  26. 0 0
      output/Tract_Mask_updated/CC_masks_not_cut/CC_SSp_ll.tt.nii
  27. 0 0
      output/Tract_Mask_updated/CC_masks_not_cut/CC_SSp_ul.tt.nii
  28. TEMPAT SAMPAH
      output/Tract_Mask_updated/CST/CST_links_CC_cut.nii
  29. 0 0
      output/Tract_Mask_updated/CST/CST_links_CCasROA.nii
  30. TEMPAT SAMPAH
      output/Tract_Mask_updated/CST/CST_links_ROA_CC_fibers_cut.nii
  31. TEMPAT SAMPAH
      output/Tract_Mask_updated/CST/CST_rechts_CC_cut.nii
  32. 0 0
      output/Tract_Mask_updated/CST/CST_rechts_CCasROA.nii
  33. TEMPAT SAMPAH
      output/Tract_Mask_updated/CST/CST_rechts_ROA_CC_fibers_cut.nii
  34. TEMPAT SAMPAH
      output/Tract_Mask_updated/Extrapyramidal_tract_masks /Retikulospinal_tract_links.tt.nii
  35. TEMPAT SAMPAH
      output/Tract_Mask_updated/Extrapyramidal_tract_masks /Retikulospinal_tract_rechts.tt.nii
  36. TEMPAT SAMPAH
      output/Tract_Mask_updated/Extrapyramidal_tract_masks /Rubrospinal_tract_links_flipped.tt.nii
  37. TEMPAT SAMPAH
      output/Tract_Mask_updated/Extrapyramidal_tract_masks /Rubrospinal_tract_rechts.tt.nii
  38. 0 0
      output/Tract_Mask_updated/Optic_tract/Optic_tract_final.tt.nii
  39. 0 0
      output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_links_SSp_and_SSs_End.nii
  40. TEMPAT SAMPAH
      output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_links_SSp_ll_and_ul_ROI.tt.nii
  41. TEMPAT SAMPAH
      output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt.nii
  42. 0 0
      output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_rechts_SSp_and_SSs_End.nii
  43. TEMPAT SAMPAH
      output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt.nii
  44. TEMPAT SAMPAH
      output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt.nii
  45. 1 0
      output/del/Nifti_Tract_density_registered/Optic_Tract_links_registered.nii.gz_registered 2.nii
  46. 1 0
      output/del/Nifti_Tract_density_registered/Optic_Tract_rechts_registered.nii.gz_registered 2.nii
  47. 0 0
      output/del/Nifti_Trakte/Optic_Tract_links.tt.nii
  48. 0 0
      output/del/Nifti_Trakte/Optic_Tract_rechts.tt.nii
  49. 0 0
      output/del/Nifti_Trakte_density/Optic_Tract_links.gz.nii
  50. 0 0
      output/del/Nifti_Trakte_density/Optic_Tract_rechts.gz.nii
  51. 0 0
      output/del/Nifti_Trakte_registered/Optic_Tract_links.tt_registered.nii
  52. 0 0
      output/del/Nifti_Trakte_registered/Optic_Tract_rechts.tt_registered.nii

output/Tract_Density_Map/CC_cut/CC_MOp(dilated)_cut.nii.gz.nii → output/Tract_Density_Map/CC_masks_cut/CC_MOp(dilated)_cut.nii.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CC_cut/CC_MOp_MOp_cut.nii.gz.nii → output/Tract_Density_Map/CC_masks_cut/CC_MOp_MOp_cut.nii.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CC_cut/CC_MOs_MOs_cut.nii.gz.nii → output/Tract_Density_Map/CC_masks_cut/CC_MOs_MOs_cut.nii.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CC_cut/CC_SSp_ll_cut.nii.gz.nii → output/Tract_Density_Map/CC_masks_cut/CC_SSp_ll_cut.nii.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CC_cut/CC_SSp_ul_cut.nii.gz.nii → output/Tract_Density_Map/CC_masks_cut/CC_SSp_ul_cut.nii.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CC_MOp(dilated).gz.nii → output/Tract_Density_Map/CC_masks_not_cut/CC_MOp(dilated).gz.nii
Tampilan Berkas


output/Tract_Density_Map/CC_MOp_MOp.gz.nii → output/Tract_Density_Map/CC_masks_not_cut/CC_MOp_MOp.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CC_MOs_MOs.gz.nii → output/Tract_Density_Map/CC_masks_not_cut/CC_MOs_MOs.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CC_SSp_ll.gz.nii → output/Tract_Density_Map/CC_masks_not_cut/CC_SSp_ll.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CC_SSp_ul.gz.nii → output/Tract_Density_Map/CC_masks_not_cut/CC_SSp_ul.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CST_links.gz.nii → output/Tract_Density_Map/CST_masks/CST_links.gz.nii
Tampilan Berkas


output/Tract_Density_Map/CST_rechts.gz.nii → output/Tract_Density_Map/CST_masks/CST_rechts.gz.nii
Tampilan Berkas


output/Tract_Density_Map/Optic_tract_final.nii.gz.nii → output/Tract_Density_Map/Optic_tract_mask/Optic_tract_final.nii.gz.nii
Tampilan Berkas


output/Tract_Density_Map/Thalamocorticale_links.gz.nii → output/Tract_Density_Map/Thalamocortical_tract_masks/Thalamocorticale_links.gz.nii
Tampilan Berkas


output/Tract_Density_Map/Thalamocorticale_rechts.gz.nii → output/Tract_Density_Map/Thalamocortical_tract_masks/Thalamocorticale_rechts.gz.nii
Tampilan Berkas


+ 0 - 1
output/Tract_Density_Map_registered/Optic_Tract_links_registered.nii.gz_registered.nii
Tampilan Berkas 

@@ -1 +0,0 @@
 
-../../.git/annex/objects/Gw/q3/MD5E-s38523232--a2913f569f1d3f00315191a6b3db3df8.nii/MD5E-s38523232--a2913f569f1d3f00315191a6b3db3df8.nii

+ 0 - 1
output/Tract_Density_Map_registered/Optic_Tract_rechts_registered.nii.gz_registered.nii
Tampilan Berkas 

@@ -1 +0,0 @@
 
-../../.git/annex/objects/qJ/XG/MD5E-s38523232--22b50e9cc8ed71ba5ffd458e11eb9b27.nii/MD5E-s38523232--22b50e9cc8ed71ba5ffd458e11eb9b27.nii

output/Tract_Mask/CC_masks_cut/CC_MOp(dilated)_cut.tt.nii → output/Tract_Mask_updated/CC_masks_cut/CC_MOp(dilated)_cut.tt.nii
Tampilan Berkas


output/Tract_Mask/CC_masks_cut/CC_MOp_MOp_cut.tt.nii → output/Tract_Mask_updated/CC_masks_cut/CC_MOp_MOp_cut.tt.nii
Tampilan Berkas


output/Tract_Mask/CC_masks_cut/CC_MOs_MOs_cut.tt.nii → output/Tract_Mask_updated/CC_masks_cut/CC_MOs_MOs_cut.tt.nii
Tampilan Berkas


output/Tract_Mask/CC_masks_cut/CC_SSp_ll_cut.tt.nii → output/Tract_Mask_updated/CC_masks_cut/CC_SSp_ll_cut.tt.nii
Tampilan Berkas


output/Tract_Mask/CC_masks_cut/CC_SSp_ul_cut.tt.nii → output/Tract_Mask_updated/CC_masks_cut/CC_SSp_ul_cut.tt.nii
Tampilan Berkas


output/Tract_Mask/CC_MOp(dilated).nii → output/Tract_Mask_updated/CC_masks_not_cut/CC_MOp(dilated).nii
Tampilan Berkas


output/Tract_Mask/CC_MOp_MOp.tt.nii → output/Tract_Mask_updated/CC_masks_not_cut/CC_MOp_MOp.tt.nii
Tampilan Berkas


output/Tract_Mask/CC_Mos_Mos.tt.nii → output/Tract_Mask_updated/CC_masks_not_cut/CC_MOs_MOs.tt.nii
Tampilan Berkas


output/Tract_Mask/CC_SSp_ll.tt.nii → output/Tract_Mask_updated/CC_masks_not_cut/CC_SSp_ll.tt.nii
Tampilan Berkas


output/Tract_Mask/CC_SSp_ul.tt.nii → output/Tract_Mask_updated/CC_masks_not_cut/CC_SSp_ul.tt.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/CST/CST_links_CC_cut.nii
Tampilan Berkas


output/Tract_Mask/CST_Links.nii → output/Tract_Mask_updated/CST/CST_links_CCasROA.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/CST/CST_links_ROA_CC_fibers_cut.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/CST/CST_rechts_CC_cut.nii
Tampilan Berkas


output/Tract_Mask/CST_Rechts.nii → output/Tract_Mask_updated/CST/CST_rechts_CCasROA.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/CST/CST_rechts_ROA_CC_fibers_cut.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/Extrapyramidal_tract_masks /Retikulospinal_tract_links.tt.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/Extrapyramidal_tract_masks /Retikulospinal_tract_rechts.tt.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/Extrapyramidal_tract_masks /Rubrospinal_tract_links_flipped.tt.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/Extrapyramidal_tract_masks /Rubrospinal_tract_rechts.tt.nii
Tampilan Berkas


output/Tract_Mask/Optic_tract_final.tt.nii → output/Tract_Mask_updated/Optic_tract/Optic_tract_final.tt.nii
Tampilan Berkas


output/Tract_Mask/Thalamocorticale_links.nii → output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_links_SSp_and_SSs_End.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_links_SSp_ll_and_ul_ROI.tt.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt.nii
Tampilan Berkas


output/Tract_Mask/Thalamocorticale_rechts.nii → output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_rechts_SSp_and_SSs_End.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt.nii
Tampilan Berkas


TEMPAT SAMPAH
output/Tract_Mask_updated/Thalamocortical_tracts/Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt.nii
Tampilan Berkas


+ 1 - 0
output/del/Nifti_Tract_density_registered/Optic_Tract_links_registered.nii.gz_registered 2.nii
Tampilan Berkas 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/Gw/q3/MD5E-s38523232--a2913f569f1d3f00315191a6b3db3df8.nii/MD5E-s38523232--a2913f569f1d3f00315191a6b3db3df8.nii

+ 1 - 0
output/del/Nifti_Tract_density_registered/Optic_Tract_rechts_registered.nii.gz_registered 2.nii
Tampilan Berkas 

@@ -0,0 +1 @@
 
+../../../.git/annex/objects/qJ/XG/MD5E-s38523232--22b50e9cc8ed71ba5ffd458e11eb9b27.nii/MD5E-s38523232--22b50e9cc8ed71ba5ffd458e11eb9b27.nii

output/Tract_Mask/Optic_Tract_links.tt.nii → output/del/Nifti_Trakte/Optic_Tract_links.tt.nii
Tampilan Berkas


output/Tract_Mask/Optic_Tract_rechts.tt.nii → output/del/Nifti_Trakte/Optic_Tract_rechts.tt.nii
Tampilan Berkas


output/Tract_Density_Map/Optic_Tract_links.gz.nii → output/del/Nifti_Trakte_density/Optic_Tract_links.gz.nii
Tampilan Berkas


output/Tract_Density_Map/Optic_Tract_rechts.gz.nii → output/del/Nifti_Trakte_density/Optic_Tract_rechts.gz.nii
Tampilan Berkas


output/Tract_Mask_registered/Optic_Tract_links.tt_registered.nii → output/del/Nifti_Trakte_registered/Optic_Tract_links.tt_registered.nii
Tampilan Berkas


output/Tract_Mask_registered/Optic_Tract_rechts.tt_registered.nii → output/del/Nifti_Trakte_registered/Optic_Tract_rechts.tt_registered.nii
Tampilan Berkas