added overlap percentage csv

code/proof_of_modalities.py

@@ -1,45 +1,102 @@
 import nibabel as nib
 import numpy as np
+import os
+import glob
+import pandas as pd
+import matplotlib.pyplot as plt
+from scipy.ndimage import rotate
+import math
 
-
-
-# Get the directory where the code file is located
+# Assuming __file__ is defined in your environment; otherwise, replace it with your script's filename
 code_dir = os.path.dirname(os.path.abspath(__file__))
-
-# Get the parent directory of the code directory
 parent_dir = os.path.dirname(code_dir)
-viral_tracing_SearchPath = os.path.join(parent_dir,"output","Viral_tracing_flipped","*.nii*")
+
+# Define the search paths for viral tracing and masks
+viral_tracing_SearchPath = os.path.join(parent_dir, "output", "Viral_tracing_flipped", "*fli*.nii*")
+masks_SearchPath = os.path.join(parent_dir, "output", "Tract_Mask_registered", "*.nii*")
+
+# Get the list of viral tracing files and masks files
 viral_tracing_files = glob.glob(viral_tracing_SearchPath)
+masks_files = glob.glob(masks_SearchPath)
+
+# Create a folder for saving plots if it doesn't exist
+save_folder = os.path.join(parent_dir, "output", "MaskComparisons")
+if not os.path.exists(save_folder):
+    os.makedirs(save_folder)
+
+# Set the FigureFlag
+FigureFlag = True
 
-masks_SearchPath = os.path.join(parent_dir,"output","Viral_tracing_density_maps_from_Jupyter_Notebook","*.nii*")
+# Create an empty list to store the results as dictionaries
+results_list = []
 
+# Loop through each viral tracing file
+for vv in viral_tracing_files:
+    # Exclude the file "average_template_50_from_website_flipped.nii.gz"
+    if "average_template_50_from_website_flipped.nii.gz" in vv:
+        continue
 
+    # Load the viral tracing NIfTI file
+    viral_tracing_img = nib.load(vv)
+    viral_tracing_data = viral_tracing_img.get_fdata()
 
-# Load NIfTI viral tracing data
-viral_tracing_img = nib.load(r"E:\2024_Ruthe_SND\output\Viral_tracing_flipped\Mop_projection_density_VT_mask.nii.gz")
-viral_tracing_data = viral_tracing_img.get_fdata()
+    # Loop through each masks file
+    for ff in masks_files:
+        # Load the masks NIfTI file
+        masks_img = nib.load(ff)
+        masks_data = masks_img.get_fdata()
 
-# Load NIfTI mask data
-mask_img = nib.load(r"C:\Users\aswen\Desktop\Code\2024_Ruthe_SND\output\Tract_Mask_registered\CC_Mop_dilated_registered.nii")
-mask_data = mask_img.get_fdata()
+        # Calculate dynamic thresholds based on maximum and minimum values in the mask, excluding the actual min and max
+        min_threshold = np.min(viral_tracing_data)
+        max_threshold = np.max(viral_tracing_data)
+        thresholds = np.linspace(min_threshold, max_threshold, num=5)[0:-1]  # Excludes actual min and max
 
-# Load template
-template_img = nib.load(r"C:\Users\aswen\Desktop\Code\2024_Ruthe_SND\output\C57BL6_mouse.iso_registerd.nii.gz")
-template_data = template_img.get_fdata()
+        # Loop through each threshold
+        for threshold in thresholds:
+            # Apply threshold to viral tracing data
+            viral_tracing_thresholded = (viral_tracing_data > threshold)
 
-# Check dimensions and shapes to ensure they align if needed
-print("Viral Tracing Data Shape:", viral_tracing_data.shape)
-print("Mask Data Shape:", mask_data.shape)
-print("Template Data Shape:", template_data.shape)
+            # Calculate percentage of coverage
+            overlap = np.logical_and(viral_tracing_thresholded, masks_data)
+            num_covered_voxels = np.sum(overlap)
+            total_voxels = np.sum(masks_data)
+            percentage_covered = (num_covered_voxels / total_voxels) * 100
 
-# Now you can put them together based on your requirements
-# For example, if you want to overlay viral tracing data on the template using the mask
-# Assuming all data have the same dimensions
+            if FigureFlag:
+                # Rotate images by 90 degrees clockwise
+                masks_data_rotated = np.rot90(masks_data, k=-1)
+                viral_tracing_thresholded_rotated = np.rot90(viral_tracing_thresholded, k=-1)
+                overlap_rotated = np.rot90(overlap, k=-1)
+    
+                # Plot middle 50% slices
+                num_slices = masks_data_rotated.shape[2]
+                start_index = int(num_slices * 0.4)
+                end_index = int(num_slices * 0.9)
+                num_cols = int(math.ceil(math.sqrt(end_index - start_index)))  # Calculate number of columns as ceiling of square root
+                num_rows = int(math.ceil((end_index - start_index) / num_cols))  # Calculate number of rows
+                fig, axes = plt.subplots(num_rows, num_cols, figsize=(20, 20))
+                for i in range(start_index, end_index):
+                    row = (i - start_index) // num_cols
+                    col = (i - start_index) % num_cols
+                    axes[row, col].imshow(masks_data_rotated[:, :, i], cmap='Reds')  # Drawn mask in bright red
+                    axes[row, col].imshow(viral_tracing_thresholded_rotated[:, :, i], alpha=0.5, cmap='Greens')  # Viral tracing in grass green
+                    axes[row, col].imshow(overlap_rotated[:, :, i], alpha=0.5, cmap='Blues')  # Overlap in light blue
+                    #axes[row, col].set_title(f"Slice {i}")
+                    axes[row, col].axis('off')  # Turn off axis for speed
+                
+                # Save the figure if FigureFlag is True
+    
+                    plt.suptitle(f"Overlap of Masks for {os.path.basename(vv)} and {os.path.basename(ff)} (Threshold {threshold})")
+                    save_path = os.path.join(save_folder, f"{os.path.basename(vv).replace('.nii.gz', '')}_{os.path.basename(ff).replace('.nii', '')}_Threshold_{threshold}_middle_slices.png")
+                    plt.savefig(save_path, bbox_inches='tight', pad_inches=0, dpi=80)  # Optimize for speed
+                    plt.close()
 
-# Apply mask to viral tracing data
-viral_tracing_masked = np.where(mask_data > 0, viral_tracing_data, 0)
+            # Add results to the list as a dictionary
+            results_list.append({"Viral Tracing File": os.path.basename(vv).replace(".nii.gz", ""), "Mask File": os.path.basename(ff).replace(".nii", ""), "Threshold": threshold, "Percentage of Coverage": percentage_covered})
 
-# Overlay masked viral tracing data on the template
-final_data = template_data + viral_tracing_masked
+# Convert the list of dictionaries into a DataFrame
+results_df = pd.DataFrame(results_list)
 
-# Save or further process the final_data as needed
+# Save results to a CSV file
+SavePath = os.path.join(parent_dir, "output", "Overlap_metrics_of_VT_and_dwi_mass.csv")
+results_df.to_csv(SavePath, index=False)

output/Overlap_metrics_of_VT_and_dwi_masks.csv

@@ -0,0 +1,541 @@
+Viral Tracing File,Mask File,Threshold,Percentage of Coverage
+Mop_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0,79.55447728
+Mop_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.25,30.49459638
+Mop_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.5,17.91740185
+Mop_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.75,11.65361712
+Mop_projection_density_VT_flipped,CC_MOp(dilated)_registered,0,84.97544395
+Mop_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.25,31.26827301
+Mop_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.5,17.80061354
+Mop_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.75,11.26553656
+Mop_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0,97.39984651
+Mop_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.25,35.13737529
+Mop_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.5,14.77820414
+Mop_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.75,9.18495779
+Mop_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0,99.60707269
+Mop_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.25,55.36702983
+Mop_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.5,33.6131452
+Mop_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.75,23.45061618
+Mop_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0,96.27638549
+Mop_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.25,14.42801803
+Mop_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.5,0.11858645
+Mop_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.75,0
+Mop_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0,99.01423877
+Mop_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.25,18.79518072
+Mop_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.5,0.284775465
+Mop_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.75,0
+Mop_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0,50.68384224
+Mop_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.25,10.36895674
+Mop_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.5,5.94783715
+Mop_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.75,3.132951654
+Mop_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0,1.693404635
+Mop_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.25,0
+Mop_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.5,0
+Mop_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.75,0
+Mop_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0,22.69102135
+Mop_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.25,0.025726782
+Mop_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.5,0
+Mop_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.75,0
+Mop_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0,3.229665072
+Mop_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.25,0
+Mop_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.5,0
+Mop_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.75,0
+Mop_projection_density_VT_flipped,CST_links_CCasROA_registered,0,81.31493783
+Mop_projection_density_VT_flipped,CST_links_CCasROA_registered,0.25,23.69272696
+Mop_projection_density_VT_flipped,CST_links_CCasROA_registered,0.5,7.170839721
+Mop_projection_density_VT_flipped,CST_links_CCasROA_registered,0.75,3.031851473
+Mop_projection_density_VT_flipped,CST_links_CC_cut_registered,0,80.28751906
+Mop_projection_density_VT_flipped,CST_links_CC_cut_registered,0.25,22.41341756
+Mop_projection_density_VT_flipped,CST_links_CC_cut_registered,0.5,7.471139185
+Mop_projection_density_VT_flipped,CST_links_CC_cut_registered,0.75,3.485079503
+Mop_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0,80.02262443
+Mop_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.25,22.51131222
+Mop_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.5,7.398190045
+Mop_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.75,3.50678733
+Mop_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0,59.78058758
+Mop_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.25,16.25139457
+Mop_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.5,7.753811826
+Mop_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.75,5.280773522
+Mop_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0,58.56939067
+Mop_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.25,14.75443244
+Mop_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.5,6.602812309
+Mop_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.75,4.809455879
+Mop_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0,59.40007642
+Mop_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.25,15.15093619
+Mop_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.5,6.935422239
+Mop_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.75,4.986625908
+Mop_projection_density_VT_flipped,Optic_tract_final.tt_registered,0,9.703213901
+Mop_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.25,0
+Mop_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.5,0
+Mop_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.75,0
+Mop_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0,82.55152807
+Mop_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.25,17.72091921
+Mop_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.5,7.735133855
+Mop_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.75,3.802416489
+Mop_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0,58.7425984
+Mop_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.25,4.197143852
+Mop_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.5,2.098571926
+Mop_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.75,1.114594218
+Mop_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0,70.35765379
+Mop_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.25,10.21459227
+Mop_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.5,3.633762518
+Mop_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.75,1.287553648
+Mop_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0,44.78298362
+Mop_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.25,7.559643576
+Mop_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.5,1.782121299
+Mop_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.75,0.948548433
+Mop_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0,23.1511254
+Mop_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.25,1.414790997
+Mop_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.5,0.643086817
+Mop_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.75,0.225080386
+Mop_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0,66.36212625
+Mop_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.25,3.903654485
+Mop_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.5,1.079734219
+Mop_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.75,0.166112957
+Mop_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0,55.88850174
+Mop_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.25,1.428571429
+Mop_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.5,0.522648084
+Mop_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.75,0.104529617
+Mop_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0,11.03629977
+Mop_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.25,0
+Mop_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.5,0
+Mop_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.75,0
+Mop_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0,16.50671785
+Mop_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.25,0
+Mop_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.5,0
+Mop_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.75,0
+Mop_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0,15.04787962
+Mop_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.25,0
+Mop_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.5,0
+Mop_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.75,0
+Mos_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0,61.75286723
+Mos_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.25,1.742390825
+Mos_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.5,0.231583591
+Mos_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.75,0.03308337
+Mos_projection_density_VT_flipped,CC_MOp(dilated)_registered,0,49.86605793
+Mos_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.25,0.624342892
+Mos_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.5,0.098656259
+Mos_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.75,0.020163323
+Mos_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0,34.68303914
+Mos_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.25,1.083653108
+Mos_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.5,0.217958557
+Mos_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.75,0.061396777
+Mos_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0,78.35327737
+Mos_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.25,3.214859796
+Mos_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.5,0.642971959
+Mos_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.75,0.178603322
+Mos_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0,41.63174955
+Mos_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.25,2.822357499
+Mos_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.5,0.577120721
+Mos_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.75,0.158115266
+Mos_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0,86.35268346
+Mos_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.25,8.039430449
+Mos_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.5,1.686746988
+Mos_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.75,0.460021906
+Mos_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0,51.03371501
+Mos_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.25,0
+Mos_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.5,0
+Mos_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.75,0
+Mos_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0,6.506238859
+Mos_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.25,0
+Mos_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.5,0
+Mos_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.75,0
+Mos_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0,29.92024698
+Mos_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.25,0
+Mos_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.5,0
+Mos_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.75,0
+Mos_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0,9.968102073
+Mos_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.25,0
+Mos_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.5,0
+Mos_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.75,0
+Mos_projection_density_VT_flipped,CST_links_CCasROA_registered,0,65.37216828
+Mos_projection_density_VT_flipped,CST_links_CCasROA_registered,0.25,0
+Mos_projection_density_VT_flipped,CST_links_CCasROA_registered,0.5,0
+Mos_projection_density_VT_flipped,CST_links_CCasROA_registered,0.75,0
+Mos_projection_density_VT_flipped,CST_links_CC_cut_registered,0,64.16902636
+Mos_projection_density_VT_flipped,CST_links_CC_cut_registered,0.25,0
+Mos_projection_density_VT_flipped,CST_links_CC_cut_registered,0.5,0
+Mos_projection_density_VT_flipped,CST_links_CC_cut_registered,0.75,0
+Mos_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0,63.50678733
+Mos_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.25,0
+Mos_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.5,0
+Mos_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.75,0
+Mos_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0,52.84492376
+Mos_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.25,0.278914094
+Mos_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.5,0
+Mos_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.75,0
+Mos_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0,51.76278785
+Mos_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.25,0.183411453
+Mos_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.5,0
+Mos_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.75,0
+Mos_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0,52.25448987
+Mos_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.25,0.191058464
+Mos_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.5,0
+Mos_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.75,0
+Mos_projection_density_VT_flipped,Optic_tract_final.tt_registered,0,6.858373059
+Mos_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.25,0
+Mos_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.5,0
+Mos_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.75,0
+Mos_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0,72.58943378
+Mos_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.25,0.08291874
+Mos_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.5,0
+Mos_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.75,0
+Mos_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0,51.97666318
+Mos_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.25,0.191570881
+Mos_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.5,0
+Mos_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.75,0
+Mos_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0,75.82260372
+Mos_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.25,0.028612303
+Mos_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.5,0
+Mos_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.75,0
+Mos_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0,52.45760276
+Mos_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.25,0
+Mos_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.5,0
+Mos_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.75,0
+Mos_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0,44.34083601
+Mos_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.25,0.289389068
+Mos_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.5,0
+Mos_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.75,0
+Mos_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0,72.84053156
+Mos_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.25,0.664451827
+Mos_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.5,0
+Mos_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.75,0
+Mos_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0,72.68292683
+Mos_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.25,0.557491289
+Mos_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.5,0
+Mos_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.75,0
+Mos_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0,9.865339578
+Mos_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.25,0
+Mos_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.5,0
+Mos_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.75,0
+Mos_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0,14.39539347
+Mos_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.25,0
+Mos_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.5,0
+Mos_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.75,0
+Mos_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0,17.51025992
+Mos_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.25,0
+Mos_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.5,0
+Mos_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.75,0
+Optic_tract_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0,2.652183502
+Optic_tract_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CC_MOp(dilated)_registered,0,2.048017513
+Optic_tract_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.25,0.001440237
+Optic_tract_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0,1.160399079
+Optic_tract_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0,0.500089302
+Optic_tract_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0,1.510000791
+Optic_tract_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0,0.810514786
+Optic_tract_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0,3.784987277
+Optic_tract_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0,0.08912656
+Optic_tract_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0,5.891432982
+Optic_tract_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0,3.668261563
+Optic_tract_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CST_links_CCasROA_registered,0,33.4184977
+Optic_tract_projection_density_VT_flipped,CST_links_CCasROA_registered,0.25,0.119230114
+Optic_tract_projection_density_VT_flipped,CST_links_CCasROA_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CST_links_CCasROA_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CST_links_CC_cut_registered,0,33.54389022
+Optic_tract_projection_density_VT_flipped,CST_links_CC_cut_registered,0.25,0.065345241
+Optic_tract_projection_density_VT_flipped,CST_links_CC_cut_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CST_links_CC_cut_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0,33.46153846
+Optic_tract_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.25,0.067873303
+Optic_tract_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0,15.21011528
+Optic_tract_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0,15.36580395
+Optic_tract_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0,15.20825373
+Optic_tract_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,Optic_tract_final.tt_registered,0,51.58388436
+Optic_tract_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.25,1.184068891
+Optic_tract_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.5,0.461325542
+Optic_tract_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.75,0.207596494
+Optic_tract_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0,25.75219142
+Optic_tract_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.25,0.935797204
+Optic_tract_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.5,0.189528548
+Optic_tract_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.75,0.035536603
+Optic_tract_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0,12.57401602
+Optic_tract_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.25,0.026123302
+Optic_tract_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0,33.53361946
+Optic_tract_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.25,2.947067239
+Optic_tract_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.5,0.572246066
+Optic_tract_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.75,0.114449213
+Optic_tract_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0,18.42483472
+Optic_tract_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0,86.23794212
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.25,13.63344051
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.5,11.06109325
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.75,9.163987138
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0,69.76744186
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.25,8.056478405
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.5,0.415282392
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0,63.93728223
+Optic_tract_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.25,13.03135889
+Optic_tract_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.5,6.480836237
+Optic_tract_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.75,3.832752613
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0,42.91569087
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0,42.86628279
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.25,0
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.5,0
+Optic_tract_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.75,0
+Optic_tract_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0,44.39124487
+Optic_tract_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.25,0
+Optic_tract_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.5,0
+Optic_tract_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0,54.40008822
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.25,2.795544773
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.5,0.937362153
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.75,0.206771063
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp(dilated)_registered,0,48.69082425
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.25,2.971209655
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.5,1.193956764
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.75,0.538648769
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0,17.20337682
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0,28.17467405
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0,17.78796743
+SSp_ul_and_ll_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.25,0.007905763
+SSp_ul_and_ll_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0,18.88280394
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0,82.49045802
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.25,3.291984733
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.5,0.333969466
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.75,0.015903308
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0,79.59001783
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.25,14.34937611
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.5,1.426024955
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0,80.29328531
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.25,6.817597119
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.5,1.054798045
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.75,0.025726782
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0,73.52472089
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.25,10.64593301
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.5,1.63476874
+SSp_ul_and_ll_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.75,0.039872408
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_CCasROA_registered,0,80.34406404
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_CCasROA_registered,0.25,23.50536536
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_CCasROA_registered,0.5,9.759836484
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_CCasROA_registered,0.75,3.406574689
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_CC_cut_registered,0,79.22021346
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_CC_cut_registered,0.25,25.31038989
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_CC_cut_registered,0.5,11.47898061
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_CC_cut_registered,0.75,4.116750163
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0,78.68778281
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.25,25.13574661
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.5,11.5158371
+SSp_ul_and_ll_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.75,4.095022624
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0,44.55187802
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0,43.34624007
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0,43.94344669
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,Optic_tract_final.tt_registered,0,6.166384746
+SSp_ul_and_ll_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0,87.98862829
+SSp_ul_and_ll_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.25,19.91234305
+SSp_ul_and_ll_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.5,8.50509358
+SSp_ul_and_ll_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.75,2.878464819
+SSp_ul_and_ll_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0,46.16858238
+SSp_ul_and_ll_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0,77.16738197
+SSp_ul_and_ll_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.25,13.19027182
+SSp_ul_and_ll_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.5,5.464949928
+SSp_ul_and_ll_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.75,2.918454936
+SSp_ul_and_ll_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0,48.26099454
+SSp_ul_and_ll_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0,80.54662379
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.25,2.411575563
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.5,0.803858521
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.75,0.38585209
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0,91.02990033
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.25,4.817275748
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.5,2.242524917
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.75,1.079734219
+SSp_ul_and_ll_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0,94.87804878
+SSp_ul_and_ll_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.25,11.11498258
+SSp_ul_and_ll_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.5,4.285714286
+SSp_ul_and_ll_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.75,1.463414634
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0,22.92154567
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0,25.91170825
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.25,0
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.75,0
+SSp_ul_and_ll_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0,31.87414501
+SSp_ul_and_ll_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.25,0.102599179
+SSp_ul_and_ll_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.5,0
+SSp_ul_and_ll_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.75,0
+Thalamocortical_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0,27.72110719
+Thalamocortical_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.25,3.545434495
+Thalamocortical_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.5,0.261910013
+Thalamocortical_projection_density_VT_flipped,CC_MOp(dilated)_cut.tt_registered,0.75,0.01102779
+Thalamocortical_projection_density_VT_flipped,CC_MOp(dilated)_registered,0,22.79751703
+Thalamocortical_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.25,1.190356171
+Thalamocortical_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.5,0.07633258
+Thalamocortical_projection_density_VT_flipped,CC_MOp(dilated)_registered,0.75,0.002880475
+Thalamocortical_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0,20.50038373
+Thalamocortical_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.25,1.05295472
+Thalamocortical_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.5,0.101304682
+Thalamocortical_projection_density_VT_flipped,CC_MOp_MOp.tt_registered,0.75,0.003069839
+Thalamocortical_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0,27.80853724
+Thalamocortical_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.25,3.04518664
+Thalamocortical_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.5,0.294695481
+Thalamocortical_projection_density_VT_flipped,CC_MOp_MOp_cut.tt_registered,0.75,0.008930166
+Thalamocortical_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0,10.1035655
+Thalamocortical_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.25,0.450628508
+Thalamocortical_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CC_Mos_Mos.tt_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0,21.16100767
+Thalamocortical_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.25,1.248630887
+Thalamocortical_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CC_MOs_MOs_cut.tt_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0,20.65839695
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ll.tt_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0,8.467023173
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ll_cut.tt_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0,18.42037561
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ul.tt_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0,11.76236045
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CC_SSp_ul_cut.tt_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CST_links_CCasROA_registered,0,50.77499574
+Thalamocortical_projection_density_VT_flipped,CST_links_CCasROA_registered,0.25,0.698347811
+Thalamocortical_projection_density_VT_flipped,CST_links_CCasROA_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CST_links_CCasROA_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CST_links_CC_cut_registered,0,49.68416467
+Thalamocortical_projection_density_VT_flipped,CST_links_CC_cut_registered,0.25,0.740579394
+Thalamocortical_projection_density_VT_flipped,CST_links_CC_cut_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CST_links_CC_cut_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0,49.47963801
+Thalamocortical_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.25,0.746606335
+Thalamocortical_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CST_links_ROA_CC_fibers_cut_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0,1.636296021
+Thalamocortical_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CST_rechts_CCasROA_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0,1.609944977
+Thalamocortical_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CST_rechts_CC_cut_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0,1.509361865
+Thalamocortical_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,CST_rechts_ROA_CC_fibers_cut_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,Optic_tract_final.tt_registered,0,6.412425035
+Thalamocortical_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,Optic_tract_final.tt_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0,59.29874437
+Thalamocortical_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.25,7.225775882
+Thalamocortical_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.5,0.556740109
+Thalamocortical_projection_density_VT_flipped,Retikulospinal_tract_links_registered,0.75,0.023691068
+Thalamocortical_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0,3.509230233
+Thalamocortical_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,Retikulospinal_tract_rechts_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0,52.53218884
+Thalamocortical_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.25,8.297567954
+Thalamocortical_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.5,0.600858369
+Thalamocortical_projection_density_VT_flipped,Rubrospinal_tract_links_flipped_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0,0.229951135
+Thalamocortical_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,Rubrospinal_tract_rechts_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0,47.94212219
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_links_SSp_and_SSs_End_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0,47.59136213
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_links_SSp_ll_and_ul_ROI.tt_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0,58.95470383
+Thalamocortical_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.25,0.034843206
+Thalamocortical_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.5,0
+Thalamocortical_projection_density_VT_flipped,"Thalamocorticale_links_SSp_ul_and_ll_End_0,2.tt_registered",0.75,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0,0.175644028
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_and_SSs_End_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0,0.063979527
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.25,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.5,0
+Thalamocortical_projection_density_VT_flipped,Thalamocorticale_rechts_SSp_ll_and_ul_ROI.tt_registered,0.75,0
+Thalamocortical_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0,0.136798906
+Thalamocortical_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.25,0
+Thalamocortical_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.5,0
+Thalamocortical_projection_density_VT_flipped,"Thalamocorticale_rechts_SSp_ul_and_ll_End_0,2.tt_registered",0.75,0