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gin commit from retina-05-17

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ycanerol 3 years ago
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9eb214aa62
1 changed files with 7 additions and 2 deletions
  1. 7 2
      README.md

+ 7 - 2
README.md

@@ -21,9 +21,14 @@ Ganglion unit spike train data recorded from marmoset retina. Focus on stimulati
 `spike_sorting_ks.ods` contains only the metadata and is there for backward compatibility purposes.
 
 ### frametimes
-contains the pulses for each stimulus e.g. 1.npz
 
-both onsets and offsets
+Synchronization of stimulus and recorded data.
+
+There is a delay between a pulse being recorded and the screen actually updating. This is the monitor_delay cell in the `spike_sorting_ks.ods` file.
+
+This value is already added when saving `.npz` files. They already contain the correction, in contrast to the `.mat` files that most people use in the lab, which do not have it.
+
+The npz files contain two arrays, f_on and f_off, respectively for the onsets and the offsets of the square-wave pulse. For more information, check the code `pymer/modules/analysis_scripts.py:extractframetimes`
 
 ### ks_sorted