Jonathan Oesterle
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gin commit from DESKTOP-PE0A79K
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4 週間 前 | |
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| .. | ||
| alphaanalysis | 2 ヶ月 前 | |
| notebooks | 4 週間 前 | |
| .gitignore | 2 ヶ月 前 | |
| Readme.md | 1 ヶ月 前 | |
| pyproject.toml | 2 ヶ月 前 | |
| requirements.txt | 2 ヶ月 前 | |
| setup.cfg | 2 ヶ月 前 | |
Readme.md
Usage
Setup
Install the package via pip:
cd code/AlphaAnalysis
pip install -r requirements.txt
pip install -e .
For some figures, you will also require R. The R-packages are specified in the respective notebooks.
Figures
Open the notebooks in notebooks/figures to recreate the figures from the paper.
| datacite.yml | |
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| Title | Task-specific regional circuit adaptations in distinct mouse retinal ganglion cells |
| Authors |
Oesterle,Jonathan;Institute for Ophthalmic Research, University of Tübingen, Germany; Hertie Institute for AI in Brain Health, University of Tübingen, Tübingen, Germany;ORCID:0000-0001-8919-1445
Ran,Yanli;Institute for Ophthalmic Research, University of Tübingen, Germany; Institute of Physiology, School of Basic Medical Sciences, Lanzhou University, China Stahr,Paul;Max Planck Institute for Neurobiology of Behavior, Bonn, Germany Kerr,Jason ND;Max Planck Institute for Neurobiology of Behavior, Bonn, Germany;ORCID:0000-0001-9459-883X Schubert,Timm;Institute for Ophthalmic Research, University of Tübingen, Germany Berens,Philipp;Hertie Institute for AI in Brain Health, University of Tübingen, Tübingen, Germany;ORCID:0000-0002-0199-4727 Euler,Thomas;Institute for Ophthalmic Research, University of Tübingen, Germany;ORCID:0000-0002-4567-6966 |
| Description | This repository contains the data, analysis pipeline, and models underlying the analyses published in Oesterle, Ran et al. Our study provides evidence that the mouse retina shows regional adaptations in signal processing, enhancing their ability to detect prey during hunting. |
| License | Creative Commons Attribution-NonCommercial-ShareAlike 4.0 (https://creativecommons.org/licenses/by-nc-sa/4.0/) |
| References |
Sustained ON alpha retinal ganglion cells in the temporal retina exhibit task-specific regional adaptions in dendritic signal integration [doi:10.1101/2024.03.27.586958] (IsSupplementTo)
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| Funding |
DFG; BE 5601/6-1
DFG; BE 5601/9-1 DFG; EU 42/10-1 DFG; EU 42/12-1 NSFC; YR 32200810 MPG |
| Keywords |
Neuroscience
Retinal ganglion cells Visual ecology Regional circuit adaptations |
| Resource Type |
Dataset |