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eulerlab
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s-on-alpha-regional
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10.12751/g-node.7g8dd6
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AlphaAnalysis
Jonathan Oesterle 2bc29d6d78 gin commit from DESKTOP-PE0A79K 4 minggu lalu
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alphaanalysis 5eccf19c34 Upload files to 'code/AlphaAnalysis' 2 bulan lalu
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Readme.md

Usage

Setup

Install the package via pip:

cd code/AlphaAnalysis 
pip install -r requirements.txt    
pip install -e .

For some figures, you will also require R. The R-packages are specified in the respective notebooks.

Figures

Open the notebooks in notebooks/figures to recreate the figures from the paper.

datacite.yml
Title Task-specific regional circuit adaptations in distinct mouse retinal ganglion cells
Authors Oesterle,Jonathan;Institute for Ophthalmic Research, University of Tübingen, Germany; Hertie Institute for AI in Brain Health, University of Tübingen, Tübingen, Germany;ORCID:0000-0001-8919-1445
Ran,Yanli;Institute for Ophthalmic Research, University of Tübingen, Germany; Institute of Physiology, School of Basic Medical Sciences, Lanzhou University, China
Stahr,Paul;Max Planck Institute for Neurobiology of Behavior, Bonn, Germany
Kerr,Jason ND;Max Planck Institute for Neurobiology of Behavior, Bonn, Germany;ORCID:0000-0001-9459-883X
Schubert,Timm;Institute for Ophthalmic Research, University of Tübingen, Germany
Berens,Philipp;Hertie Institute for AI in Brain Health, University of Tübingen, Tübingen, Germany;ORCID:0000-0002-0199-4727
Euler,Thomas;Institute for Ophthalmic Research, University of Tübingen, Germany;ORCID:0000-0002-4567-6966
Description This repository contains the data, analysis pipeline, and models underlying the analyses published in Oesterle, Ran et al. Our study provides evidence that the mouse retina shows regional adaptations in signal processing, enhancing their ability to detect prey during hunting.
License Creative Commons Attribution-NonCommercial-ShareAlike 4.0 (https://creativecommons.org/licenses/by-nc-sa/4.0/)
References Sustained ON alpha retinal ganglion cells in the temporal retina exhibit task-specific regional adaptions in dendritic signal integration [doi:10.1101/2024.03.27.586958] (IsSupplementTo)
Funding DFG; BE 5601/6-1
DFG; BE 5601/9-1
DFG; EU 42/10-1
DFG; EU 42/12-1
NSFC; YR 32200810
MPG
Keywords Neuroscience
Retinal ganglion cells
Visual ecology
Regional circuit adaptations
Resource Type Dataset