Longitudinal MRI (T2-weighted and rs-fMRI) of GFAP-/-/Vim-/- and WT mice

Markus Aswendt d3f7e02992 Add information for publishing with DataCite		4 jaren geleden
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GFAP_PT_4wks

Longitudinal MRI (T2-weighted and rs-fMRI) of GFAP-/-/Vim-/- and WT mice; 6 time points over 4 weeks post photothrombotic stroke.

Files:

MRI_raw_data - contains all raw data in Bruker 2dseq format and the original Bruker folder structure
MRI_proc_data - contains all data processed with the AIDAmri pipeline. Processing steps: define stroke masks, convert Bruker to NIfTI-1 data format, image re-orientation, bias-field correction, brain extraction, region-of-interest segmentation, registration with the Allen Mouse Brain Atlas (CCFv3), functional connectivity analysis.

Authors:

Markus Aswendt, Ulrika Wilhelmsson, Frederique Wieters, Felix Schmitt, Niklas Pallast, Yolanda de Pablo, Lava Mohammed, Mathias Hoehn, Marcela Pekna, Milos Pekny

datacite.yml
Title	Longitudinal MRI (T2-weighted and rs-fMRI) of GFAP-/-/Vim-/- and WT mice
Authors	Aswendt,Markus;University of Cologne;ORCID:0000-0003-1423-0934 Wilhelmsson,Ulrika;University of Gothenburg;ORCID:0000-0003-3227-2687 Wieters,Frederique;University of Cologne Schmitt,Felix;University of Cologne Pallast,Niklas;University of Cologne de Pablo,Yolanda;University of Gothenburg;ORCID:0000-0001-5208-2114 Mohammed,Lava;University of Gothenburg Hoehn,Mathias;Forschungszentrum Jülich;ORCID:0000-0001-5996-7572 Pekna,Marcela;University of Gothenburg;ORCID:0000-0003-2734-8237 Pekny,Milos;University of Gothenburg;ORCID:0000-0003-1607-8075 ,
Description	Longitudinal MRI (T2-weighted and rs-fMRI) of GFAP-/-/Vim-/- and WT mice; 6 time points over 4 weeks post photothrombotic stroke.
License	Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International Public License (https://creativecommons.org/licenses/by-nc-sa/4.0/)
References
Funding
Keywords	Neuroscience Stroke Stroke recovery Photothrombose Reactive Gliosis Astrocyte MRI Functional connectivit Network analysis Graph theory
Resource Type	Dataset

README.md

GFAP_PT_4wks

Files:

Authors: