Longitudinal MRI (T2-weighted and rs-fMRI) of GFAP-/-/Vim-/- and WT mice

Markus Aswendt af93f1e285 Update 'datacite.yml' 1 year ago
MRI_proc_data bbf15aad05 gin commit from ma-macpro-server.local 1 year ago
MRI_raw_data bbf15aad05 gin commit from ma-macpro-server.local 1 year ago
.DS_Store bbf15aad05 gin commit from ma-macpro-server.local 1 year ago
LICENSE 3e318596c3 Initial commit 1 year ago
README.md 70f78c4157 Update 'README.md' 1 year ago
datacite.yml af93f1e285 Update 'datacite.yml' 1 year ago

README.md

GFAP_PT_4wks

Longitudinal MRI (T2-weighted and rs-fMRI) of GFAP-/-/Vim-/- and WT mice; 6 time points over 4 weeks post photothrombotic stroke.

Files:

  • MRI_raw_data - contains all raw data in Bruker 2dseq format and the original Bruker folder structure
  • MRI_proc_data - contains all data processed with the AIDAmri pipeline. Processing steps: define stroke masks, convert Bruker to NIfTI-1 data format, image re-orientation, bias-field correction, brain extraction, region-of-interest segmentation, registration with the Allen Mouse Brain Atlas (CCFv3), functional connectivity analysis.

Authors:

Markus Aswendt, Olivia Käsgen, Frederique Wieters, Felix Schmitt, Niklas Pallast

datacite.yml
Title Longitudinal MRI (T2-weighted and rs-fMRI) of GFAP-/-/Vim-/- and WT mice
Authors Aswendt,Markus;University of Cologne;ORCID:0000-0003-1423-0934
Käsgen,Olivia;University of Cologne
Wieters,Frederique;University of Cologne
Schmitt,Felix;University of Cologne
Pallast,Niklas;University of Cologne
Description Longitudinal MRI (T2-weighted and rs-fMRI) of GFAP-/-/Vim-/- and WT mice; 6 time points over 4 weeks post photothrombotic stroke.
License Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International Public License (https://creativecommons.org/licenses/by-nc-sa/4.0/)
References
Funding
Keywords Neuroscience
Stroke
Stroke recovery
Photothrombose
Reactive Gliosis
Astrocyte
MRI
Functional connectivit
Network analysis
Graph theory
Resource Type Dataset