Six electrophysiological datasets were recorded from three regions (V6A, PEc, PE) within the superior parietal lobule (SPL) of two Macaca fascicularis monkeys during a task involving instructed-delay foveated reaching

Stefano Diomedi ba75cceb0d Carica file su 'data' 10 meses atrás
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README.md

SPL_single_units_reaching_task

Summary

We publish six electrophysiological datasets obtained from three regions (V6A, PEc, PE) within the superior parietal lobule (SPL) of two Macaca fascicularis monkeys (MonkeyS and MonkeyF). The datasets were collected during an instructed delayed foveated reaching task conducted in the absence of light. The task involved reaching towards nine targets positioned at varying depths and directions relative to the monkeys' point of view. For each hemisphere, we have recorded neural activity from 285, 231, and 166 individual neurons in V6A, PEc, and PE, respectively. Additionally, the timing of the main behavioral events for each trial is included. The data is stored in .h5 files, which offer a convenient hierarchical structure and the ability to attach various types of information to each hierarchical level. To help you get started, we also provide example code in MATLAB and Python for understanding the data structure.

Repository structure

Related Publications

  • Diomedi, S., Vaccari, F. E., Filippini, M., Fattori, P., Galletti, C. (2020). Mixed Selectivity in Macaque Medial Parietal Cortex during Eye-Hand Reaching. IScience, 23(10), 101616. https://doi.org/10.1016/j.isci.2020.101616

  • Diomedi, S., Vaccari, F. E., Galletti, C., Hadjidimitrakis, K., & Fattori, P. (2021). Motor-like neural dynamics in two parietal areas during arm reaching. Progress in Neurobiology, 205, 102116. https://doi.org/10.1016/j.pneurobio.2021.102116

  • Vaccari, F. E., Diomedi, S., Filippini, M., Galletti, C., Fattori, P. (2021). A Poisson generalized linear model application to disentangle the effects of various parameters on neurophysiological discharges. STAR Protocols, 2(2), 100413. https://doi.org/10.1016/j.xpro.2021.100413

  • De Vitis, M., Tabanelli, M., Breveglieri, R., Filippini, M., Galletti, C., Fattori, P. (2022). The Superior Parietal Lobule of Macaque Monkey: Relative Influence of Gaze and Static Arm Position during Reaching. Eneuro, 9(1), ENEURO.0362-21.2021. https://doi.org/10.1523/ENEURO.0362-21.2021

  • Filippini, M., Borra, D., Ursino, M., Magosso, E., Fattori, P. (2022). Decoding sensorimotor information from superior parietal lobule of macaque via Convolutional Neural Networks. Neural Networks, 151, 276–294. https://doi.org/10.1016/j.neunet.2022.03.044

  • Hadjidimitrakis, K., De Vitis, M., Ghodrati, M., Filippini, M., Fattori, P. (2022). Anterior-posterior gradient in the integrated processing of forelimb movement direction and distance in macaque parietal cortex. Cell Reports, 41(6), 111608. https://doi.org/10.1016/j.celrep.2022.111608

Licensing

The six dataset in the directories data by University of Bologna, Bologna, Italy, is licensed under a Creative Commons Attribution 4.0 International License.

All code in the directories code_matlab and code_py, are each published under the BSD 3 clause licenses.

Please see the LICENSE.txt or LICENSE files in individual subdirectories for detailed respective licenses of code and data.

datacite.yml
Title Neurophysiological recordings from three cortical parietal areas during an instructed-delay reaching task
Authors Diomedi,Stefano;Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy;ORCID:0000-0002-3240-286X
Vaccari,Francesco E.;Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy;ORCID:0000-0002-3097-1495
Gamberini,Michela;Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy;ORCID:0000-0003-0945-9734
De Vitis,Marina;Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy;ORCID:0000-0001-5999-2110
Filippini,Matteo;Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy;ORCID:0000-0002-0730-4088
Fattori,Patrizia;Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy;ORCID:0000-0002-0079-3755
Description Six electrophysiological datasets were recorded from three regions (V6A, PEc, PE) within the superior parietal lobule (SPL) of two Macaca fascicularis monkeys during a task involving instructed-delay foveated reaching
License CC BY 4.0 (http://creativecommons.org/licenses/by/4.0/)
References Diomedi, S., Vaccari, F. E., Filippini, M., Fattori, P., Galletti, C. (2020). Mixed Selectivity in Macaque Medial Parietal Cortex during Eye-Hand Reaching. IScience, 23(10), 101616. [] (IsSupplementTo)
Diomedi, S., Vaccari, F. E., Galletti, C., Hadjidimitrakis, K., & Fattori, P. (2021). Motor-like neural dynamics in two parietal areas during arm reaching. Progress in Neurobiology, 205, 102116. [] (IsSupplementTo)
Vaccari, F. E., Diomedi, S., Filippini, M., Galletti, C., Fattori, P. (2021). A Poisson generalized linear model application to disentangle the effects of various parameters on neurophysiological discharges. STAR Protocols, 2(2), 100413. [] (IsSupplementTo)
De Vitis, M., Tabanelli, M., Breveglieri, R., Filippini, M., Galletti, C., Fattori, P. (2022). The Superior Parietal Lobule of Macaque Monkey: Relative Influence of Gaze and Static Arm Position during Reaching. Eneuro, 9(1), ENEURO.0362-21.2021. [] (IsSupplementTo)
Filippini, M., Borra, D., Ursino, M., Magosso, E., Fattori, P. (2022). Decoding sensorimotor information from superior parietal lobule of macaque via Convolutional Neural Networks. Neural Networks, 151, 276–294. [] (IsSupplementTo)
Hadjidimitrakis, K., De Vitis, M., Ghodrati, M., Filippini, M., Fattori, P. (2022). Anterior-posterior gradient in the integrated processing of forelimb movement direction and distance in macaque parietal cortex. Cell Reports, 41(6), 111608. [] (IsSupplementTo)
Funding EU, H2020-EIC-FETPROACT-2019951910-MAIA
NGEU+MUR, NRRP project MNESYS (PE0000006) – A Multiscale integrated approach to the study of the nervous system in health and disease (DN. 1553 11.10.2022)
MUR, PRIN2020: 20208RB4N9
Keywords Neuroscience
Superior Parietal Lobule
Posterior Parietal Cortex
PPC
SPL
Electrophysiology
Macaque
Spikes
Reach
Resource Type Dataset