Stefano Diomedi 10 mesi fa
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LICENSE

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-Creative Commons CC0 1.0 Universal
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-Statement of Purpose
+The six dataset in the directories data by University of Bologna, Bologna, Italy, is licensed under a Creative Commons Attribution 4.0 International License.
 
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+All code in the directories code_matlab and code_py, are each published under the BSD 3 clause licenses.
 
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+Please see the LICENSE.txt or LICENSE files in individual subdirectories for detailed respective licenses of code and data.

+ 24 - 1
README.md

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 # SPL_single_units_reaching_task
+## Summary
+We publish six electrophysiological datasets obtained from three regions (V6A, PEc, PE) within the superior parietal lobule (SPL) of two Macaca fascicularis monkeys (MonkeyS and MonkeyF). The datasets were collected during an instructed delayed foveated reaching task conducted in the absence of light. The task involved reaching towards nine targets positioned at varying depths and directions relative to the monkeys' point of view. For each hemisphere, we have recorded neural activity from 285, 231, and 166 individual neurons in V6A, PEc, and PE, respectively. Additionally, the timing of the main behavioral events for each trial is included. The data is stored in .h5 files, which offer a convenient hierarchical structure and the ability to attach various types of information to each hierarchical level. To help you get started, we also provide example code in MATLAB and Python for understanding the data structure.
 
-Six electrophysiological datasets were recorded from three regions (V6A, PEc, PE) within the superior parietal lobule (SPL) of two Macaca fascicularis monkeys during a task involving instructed-delay foveated reaching
+## Repository structure
+
+## Related Publications
+* Diomedi, S., Vaccari, F. E., Filippini, M., Fattori, P., Galletti, C. (2020). Mixed Selectivity in Macaque Medial Parietal Cortex during Eye-Hand Reaching. IScience, 23(10), 101616. https://doi.org/10.1016/j.isci.2020.101616
+
+* Diomedi, S., Vaccari, F. E., Galletti, C., Hadjidimitrakis, K., & Fattori, P. (2021). Motor-like neural dynamics in two parietal areas during arm reaching. Progress in Neurobiology, 205, 102116. https://doi.org/10.1016/j.pneurobio.2021.102116
+
+* Vaccari, F. E., Diomedi, S., Filippini, M., Galletti, C., Fattori, P. (2021). A Poisson generalized linear model application to disentangle the effects of various parameters on neurophysiological discharges. STAR Protocols, 2(2), 100413. https://doi.org/10.1016/j.xpro.2021.100413
+
+* De Vitis, M., Tabanelli, M., Breveglieri, R., Filippini, M., Galletti, C., Fattori, P. (2022). The Superior Parietal Lobule of Macaque Monkey: Relative Influence of Gaze and Static Arm Position during Reaching. Eneuro, 9(1), ENEURO.0362-21.2021. https://doi.org/10.1523/ENEURO.0362-21.2021
+
+* Filippini, M., Borra, D., Ursino, M., Magosso, E., Fattori, P. (2022). Decoding sensorimotor information from superior parietal lobule of macaque via Convolutional Neural Networks. Neural Networks, 151, 276–294. https://doi.org/10.1016/j.neunet.2022.03.044
+
+* Hadjidimitrakis, K., De Vitis, M., Ghodrati, M., Filippini, M., Fattori, P. (2022). Anterior-posterior gradient in the integrated processing of forelimb movement direction and distance in macaque parietal cortex. Cell Reports, 41(6), 111608. https://doi.org/10.1016/j.celrep.2022.111608
+
+
+## Licensing
+The six dataset in the directories data by University of Bologna, Bologna, Italy, is licensed under a Creative Commons Attribution 4.0 International License.
+
+All code in the directories code_matlab and code_py, are each published under the BSD 3 clause licenses.
+
+Please see the LICENSE.txt or LICENSE files in individual subdirectories for detailed respective licenses of code and data.

+ 114 - 0
datacite.yml

@@ -0,0 +1,114 @@
+# Metadata for DOI registration according to DataCite Metadata Schema 4.1.
+# For detailed schema description see https://doi.org/10.5438/0014
+
+## Required fields
+
+# The main researchers involved. Include digital identifier (e.g., ORCID)
+# if possible, including the prefix to indicate its type.
+authors:
+  -
+    firstname: "Stefano"
+    lastname: "Diomedi"
+    affiliation: "Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy"
+    id: "ORCID:0000-0002-3240-286X"
+  -
+    firstname: "Francesco E."
+    lastname: "Vaccari"
+    affiliation: "Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy"
+    id: "ORCID:0000-0002-3097-1495"
+  -
+    firstname: "Michela"
+    lastname: "Gamberini"
+    affiliation: "Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy"
+    id: "ORCID:0000-0003-0945-9734"
+  -
+    firstname: "Marina"
+    lastname: "De Vitis"
+    affiliation: "Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy"
+    id: "ORCID:0000-0001-5999-2110"
+  -
+    firstname: "Matteo"
+    lastname: "Filippini"
+    affiliation: "Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy"
+    id: "ORCID:0000-0002-0730-4088"
+  -
+    firstname: "Patrizia"
+    lastname: "Fattori"
+    affiliation: "Department of Biomedical and Neuromotor Sciences, University of Bologna, Bologna, Italy"
+    id: "ORCID:0000-0002-0079-3755"
+    
+# A title to describe the published resource.
+title: "Neurophysiological recordings from three cortical parietal areas during an instructed-delay reaching task"
+
+# Additional information about the resource, e.g., a brief abstract.
+description: |
+  Six electrophysiological datasets were recorded from three regions (V6A, PEc, PE) within the superior parietal lobule (SPL) of two Macaca fascicularis monkeys during a task involving instructed-delay foveated reaching
+
+# Lit of keywords the resource should be associated with.
+# Give as many keywords as possible, to make the resource findable.
+keywords:
+  - Neuroscience
+  - Superior Parietal Lobule
+  - Posterior Parietal Cortex
+  - PPC
+  - SPL
+  - Electrophysiology
+  - Macaque
+  - Spikes
+  - Reach
+
+# License information for this resource. Please provide the license name and/or a link to the license.
+# Please add also a corresponding LICENSE file to the repository.
+license:
+  name: "CC BY 4.0"
+  url: "http://creativecommons.org/licenses/by/4.0/"
+
+
+
+## Optional Fields
+
+# Funding information for this resource.
+# Separate funder name and grant number by comma.
+funding:
+  - "EU, H2020-EIC-FETPROACT-2019951910-MAIA"
+  - "NGEU+MUR, NRRP project MNESYS (PE0000006) – A Multiscale integrated approach to the study of the nervous system in health and disease (DN. 1553 11.10.2022)"
+  - "MUR, PRIN2020: 20208RB4N9"
+
+
+# Related publications. reftype might be: IsSupplementTo, IsDescribedBy, IsReferencedBy.
+# Please provide digital identifier (e.g., DOI) if possible.
+# Add a prefix to the ID, separated by a colon, to indicate the source.
+# Supported sources are: DOI, arXiv, PMID
+# In the citation field, please provide the full reference, including title, authors, journal etc.
+references:
+  -
+    doi: "https://doi.org/10.1016/j.isci.2020.101616"
+    reftype: "IsSupplementTo"
+    citation: "Diomedi, S., Vaccari, F. E., Filippini, M., Fattori, P., Galletti, C. (2020). Mixed Selectivity in Macaque Medial Parietal Cortex during Eye-Hand Reaching. IScience, 23(10), 101616."
+  -
+    doi: "https://doi.org/10.1016/j.pneurobio.2021.102116"
+    reftype: "IsSupplementTo"
+    citation: "Diomedi, S., Vaccari, F. E., Galletti, C., Hadjidimitrakis, K., & Fattori, P. (2021). Motor-like neural dynamics in two parietal areas during arm reaching. Progress in Neurobiology, 205, 102116."
+  -
+    doi: "https://doi.org/10.1016/j.xpro.2021.100413"
+    reftype: "IsSupplementTo"
+    citation: "Vaccari, F. E., Diomedi, S., Filippini, M., Galletti, C., Fattori, P. (2021). A Poisson generalized linear model application to disentangle the effects of various parameters on neurophysiological discharges. STAR Protocols, 2(2), 100413."
+  -
+    doi: "https://doi.org/10.1523/ENEURO.0362-21.2021"
+    reftype: "IsSupplementTo"
+    citation: "De Vitis, M., Tabanelli, M., Breveglieri, R., Filippini, M., Galletti, C., Fattori, P. (2022). The Superior Parietal Lobule of Macaque Monkey: Relative Influence of Gaze and Static Arm Position during Reaching. Eneuro, 9(1), ENEURO.0362-21.2021."
+  -
+    doi: "https://doi.org/10.1016/j.neunet.2022.03.044"
+    reftype: "IsSupplementTo"
+    citation: "Filippini, M., Borra, D., Ursino, M., Magosso, E., Fattori, P. (2022). Decoding sensorimotor information from superior parietal lobule of macaque via Convolutional Neural Networks. Neural Networks, 151, 276–294."
+  -
+    doi: "https://doi.org/10.1016/j.celrep.2022.111608"
+    reftype: "IsSupplementTo"
+    citation: "Hadjidimitrakis, K., De Vitis, M., Ghodrati, M., Filippini, M., Fattori, P. (2022). Anterior-posterior gradient in the integrated processing of forelimb movement direction and distance in macaque parietal cortex. Cell Reports, 41(6), 111608."
+
+
+# Resource type. Default is Dataset, other possible values are Software, DataPaper, Image, Text.
+resourcetype: Dataset
+
+# Do not edit or remove the following line
+templateversion: 1.2