#42 Request for additional formats (spikeextractors testing)

Uzavrená
otvorené 3 rokov pred užívateľom cbaker9 · 5 komentárov
Cody Baker okomentoval 3 rokov pred

Hey all,

spikeextractors (https://github.com/spikeinterface/spikeextractors) now performs continuous integration testing of its supported formats using this very GIN repo. However, not all of the formats spikeextractors purports to support have available data on GIN, and we would love full coverage wherever possible.

Making this as a to-do list (will edit this to add and update over time):

Recordings

  • Biocam [ ]
  • Exdir [ ]
  • CED [ ]

Sortings

  • Neuroscope [ ]
  • Alf [ ]
  • CellExplorer [ ]

I would be happy to help as much as I can with this as per Issue #27 (fine with being added as contributor or whatever it takes).

Hey all, spikeextractors (https://github.com/spikeinterface/spikeextractors) now performs continuous integration testing of its supported formats using this very GIN repo. However, not all of the formats spikeextractors purports to support have available data on GIN, and we would love full coverage wherever possible. Making this as a to-do list (will edit this to add and update over time): Recordings - Biocam [ ] - Exdir [ ] - CED [ ] Sortings - Neuroscope [ ] - Alf [ ] - CellExplorer [ ] I would be happy to help as much as I can with this as per Issue #27 (fine with being added as contributor or whatever it takes).
sprenger okomentoval 3 rokov pred
Vlastník

Hi Cody, sorry for the delay, I have added you as a collaborator, so you should be able to create branches for new formats in this repository.

Hi Cody, sorry for the delay, I have added you as a collaborator, so you should be able to create branches for new formats in this repository.
sprenger okomentoval 2 rokov pred
Vlastník

I added a set of test files for Neuroscope here: https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/pulls/67

I added a set of test files for Neuroscope here: https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/pulls/67
sprenger okomentoval 2 rokov pred
Vlastník
Biocam files were added via https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/pulls/66
sprenger okomentoval 2 rokov pred
Vlastník

@cbaker9 Do you have datasets for any of the remaining formats available?

@cbaker9 Do you have datasets for any of the remaining formats available?
Cody Baker okomentoval 2 rokov pred
Spolupracovník

@sprenger I do not; there is one more dataset eventually to be added for CellExplorer (dataset_1 there is scipy loadable, we want to add a dataset_2 that is not and requires hdfstorage instead). I'll send that to you and Sam "soon"-ish

@sprenger I do not; there is one more dataset eventually to be added for CellExplorer (dataset_1 there is scipy loadable, we want to add a dataset_2 that is not and requires hdfstorage instead). I'll send that to you and Sam "soon"-ish
Prihláste sa pre zapojenie do konverzácie.
Žiadne štítky
Žiadny míľnik
Žiadny priradený
2 účastníkov
Načítavanie...
Zrušiť
Uložiť
Zatiaľ neexistuje žiadny obsah.