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ABIDE_fs-6.0.0
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0051226
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051226 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-902
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051226
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 7523.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 180571.191146, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 177800.479033, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 358371.670179, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1441468.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1300125.707434, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 05:01:29 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 21:27:07 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 21:27:07 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2182     2169.6  wm-lh-bankssts                   101.1288     9.0940    70.0000   126.0000    56.0000 
    66. 

  66.   2 3002      2534     2455.4  wm-lh-caudalanteriorcingulate    103.3035    13.2108    45.0000   140.0000    95.0000 
    67. 

  67.   3 3003      5180     5140.0  wm-lh-caudalmiddlefrontal         96.9272    12.5051    57.0000   124.0000    67.0000 
    68. 

  68.   4 3005      2228     2225.8  wm-lh-cuneus                      95.0498    12.3462    65.0000   123.0000    58.0000 
    69. 

  69.   5 3006       674      695.0  wm-lh-entorhinal                  70.2062     9.0041     7.0000    94.0000    87.0000 
    70. 

  70.   6 3007      5641     5611.4  wm-lh-fusiform                    89.6885    14.5907    19.0000   127.0000   108.0000 
    71. 

  71.   7 3008      7435     7447.5  wm-lh-inferiorparietal            99.4646    11.4134    61.0000   126.0000    65.0000 
    72. 

  72.   8 3009      4918     4964.4  wm-lh-inferiortemporal            87.3707    13.6263    50.0000   126.0000    76.0000 
    73. 

  73.   9 3010      3241     3186.9  wm-lh-isthmuscingulate           100.2027    12.4039    25.0000   125.0000   100.0000 
    74. 

  74.  10 3011      7813     8061.9  wm-lh-lateraloccipital            98.3117    11.7964    62.0000   130.0000    68.0000 
    75. 

  75.  11 3012      5349     5267.2  wm-lh-lateralorbitofrontal        94.2810    13.4993    51.0000   127.0000    76.0000 
    76. 

  76.  12 3013      3615     3629.4  wm-lh-lingual                     90.2349    12.7056    31.0000   128.0000    97.0000 
    77. 

  77.  13 3014      3606     3542.3  wm-lh-medialorbitofrontal         91.1223    15.0065    16.0000   128.0000   112.0000 
    78. 

  78.  14 3015      3899     3989.4  wm-lh-middletemporal              86.5666    11.8654    54.0000   116.0000    62.0000 
    79. 

  79.  15 3016      1172     1239.2  wm-lh-parahippocampal             80.2031    10.8875    36.0000   109.0000    73.0000 
    80. 

  80.  16 3017      3285     3281.9  wm-lh-paracentral                 98.5851     9.7508    69.0000   125.0000    56.0000 
    81. 

  81.  17 3018      3525     3456.0  wm-lh-parsopercularis            100.6479    12.9833    62.0000   128.0000    66.0000 
    82. 

  82.  18 3019       771      757.0  wm-lh-parsorbitalis               88.4358    11.5224    62.0000   120.0000    58.0000 
    83. 

  83.  19 3020      2905     2911.6  wm-lh-parstriangularis           100.1539    12.2602    57.0000   127.0000    70.0000 
    84. 

  84.  20 3021      2941     2853.1  wm-lh-pericalcarine               98.8820    12.9319    36.0000   133.0000    97.0000 
    85. 

  85.  21 3022      5401     5555.3  wm-lh-postcentral                 94.6103    11.4666    64.0000   127.0000    63.0000 
    86. 

  86.  22 3023      4552     4358.4  wm-lh-posteriorcingulate         100.4449    11.6139    43.0000   128.0000    85.0000 
    87. 

  87.  23 3024     10379    10346.2  wm-lh-precentral                  98.6893    11.5328    64.0000   128.0000    64.0000 
    88. 

  88.  24 3025      7050     7001.5  wm-lh-precuneus                   98.3123    12.2842    38.0000   134.0000    96.0000 
    89. 

  89.  25 3026      1964     1855.9  wm-lh-rostralanteriorcingulate   102.5962    15.2372    60.0000   134.0000    74.0000 
    90. 

  90.  26 3027      9590     9573.0  wm-lh-rostralmiddlefrontal        96.2557    12.5446    57.0000   127.0000    70.0000 
    91. 

  91.  27 3028     13738    13737.8  wm-lh-superiorfrontal             93.5967    12.0693    58.0000   126.0000    68.0000 
    92. 

  92.  28 3029      9658     9776.6  wm-lh-superiorparietal            98.4784    11.8184    60.0000   127.0000    67.0000 
    93. 

  93.  29 3030      6772     6919.1  wm-lh-superiortemporal            93.1989    12.4477    54.0000   125.0000    71.0000 
    94. 

  94.  30 3031      7405     7393.4  wm-lh-supramarginal               98.6935    12.0353    61.0000   128.0000    67.0000 
    95. 

  95.  31 3032       242      249.4  wm-lh-frontalpole                 84.4339    10.2999    62.0000   117.0000    55.0000 
    96. 

  96.  32 3033       604      634.0  wm-lh-temporalpole                69.5298     8.0766    52.0000    96.0000    44.0000 
    97. 

  97.  33 3034       752      748.1  wm-lh-transversetemporal          96.1769     9.9823    68.0000   119.0000    51.0000 
    98. 

  98.  34 3035      8495     8423.8  wm-lh-insula                      93.2889    14.2460    42.0000   126.0000    84.0000 
    99. 

  99.  35 4001      2286     2286.9  wm-rh-bankssts                   103.5311     7.6588    76.0000   125.0000    49.0000 
    100. 

  100.  36 4002      2497     2455.0  wm-rh-caudalanteriorcingulate    104.2964    13.9517    42.0000   134.0000    92.0000 
    101. 

  101.  37 4003      4595     4576.2  wm-rh-caudalmiddlefrontal         98.1719    11.1738    63.0000   122.0000    59.0000 
    102. 

  102.  38 4005      2208     2282.1  wm-rh-cuneus                      89.7156     9.9586    61.0000   115.0000    54.0000 
    103. 

  103.  39 4006       545      541.9  wm-rh-entorhinal                  71.3138     7.7653    52.0000    96.0000    44.0000 
    104. 

  104.  40 4007      5382     5376.3  wm-rh-fusiform                    88.8595    12.5676    29.0000   124.0000    95.0000 
    105. 

  105.  41 4008      9596     9723.4  wm-rh-inferiorparietal            97.9882    11.0861    62.0000   128.0000    66.0000 
    106. 

  106.  42 4009      4725     4734.8  wm-rh-inferiortemporal            88.9983    13.1840    47.0000   120.0000    73.0000 
    107. 

  107.  43 4010      2685     2638.6  wm-rh-isthmuscingulate            99.6000    11.2889    35.0000   124.0000    89.0000 
    108. 

  108.  44 4011      7601     7767.6  wm-rh-lateraloccipital            89.5455    10.9441    60.0000   120.0000    60.0000 
    109. 

  109.  45 4012      4870     4835.1  wm-rh-lateralorbitofrontal        92.7801    13.7533    51.0000   125.0000    74.0000 
    110. 

  110.  46 4013      4545     4615.3  wm-rh-lingual                     87.6323    12.1200    28.0000   122.0000    94.0000 
    111. 

  111.  47 4014      2917     2865.9  wm-rh-medialorbitofrontal         92.9297    13.8916    50.0000   127.0000    77.0000 
    112. 

  112.  48 4015      5122     5251.0  wm-rh-middletemporal              92.7673    12.9134    53.0000   126.0000    73.0000 
    113. 

  113.  49 4016      1067     1132.4  wm-rh-parahippocampal             82.8201     8.8060    59.0000   107.0000    48.0000 
    114. 

  114.  50 4017      3850     3797.6  wm-rh-paracentral                 97.6431    10.1710    63.0000   122.0000    59.0000 
    115. 

  115.  51 4018      2737     2679.4  wm-rh-parsopercularis             96.5678    12.9097    62.0000   126.0000    64.0000 
    116. 

  116.  52 4019       890      889.2  wm-rh-parsorbitalis               89.1753    12.2779    58.0000   125.0000    67.0000 
    117. 

  117.  53 4020      2900     2926.7  wm-rh-parstriangularis            95.2938    12.4418    60.0000   128.0000    68.0000 
    118. 

  118.  54 4021      2919     2801.7  wm-rh-pericalcarine               87.8188    10.6582    43.0000   115.0000    72.0000 
    119. 

  119.  55 4022      5298     5408.5  wm-rh-postcentral                 96.2157    11.2681    66.0000   124.0000    58.0000 
    120. 

  120.  56 4023      4265     4093.9  wm-rh-posteriorcingulate          99.6073    12.1394    38.0000   128.0000    90.0000 
    121. 

  121.  57 4024     10636    10628.8  wm-rh-precentral                  98.3939    11.1427    63.0000   129.0000    66.0000 
    122. 

  122.  58 4025      7315     7227.1  wm-rh-precuneus                   95.5899    10.7317    31.0000   123.0000    92.0000 
    123. 

  123.  59 4026      1846     1795.4  wm-rh-rostralanteriorcingulate   107.0152    14.3389    66.0000   136.0000    70.0000 
    124. 

  124.  60 4027      9276     9429.9  wm-rh-rostralmiddlefrontal        99.0726    11.4737    62.0000   128.0000    66.0000 
    125. 

  125.  61 4028     13694    13713.1  wm-rh-superiorfrontal             96.5749    11.6964    57.0000   127.0000    70.0000 
    126. 

  126.  62 4029      8865     9030.4  wm-rh-superiorparietal            93.4731    11.7704    60.0000   132.0000    72.0000 
    127. 

  127.  63 4030      4783     4984.4  wm-rh-superiortemporal            93.8074    13.6483    54.0000   126.0000    72.0000 
    128. 

  128.  64 4031      6818     6958.8  wm-rh-supramarginal              102.9394    11.0220    68.0000   130.0000    62.0000 
    129. 

  129.  65 4032       305      292.0  wm-rh-frontalpole                 85.3016    10.4009    63.0000   111.0000    48.0000 
    130. 

  130.  66 4033       676      701.3  wm-rh-temporalpole                68.1701     7.0117    50.0000    90.0000    40.0000 
    131. 

  131.  67 4034       504      486.3  wm-rh-transversetemporal          99.1012     8.4562    77.0000   118.0000    41.0000 
    132. 

  132.  68 4035      8841     8763.8  wm-rh-insula                      93.2176    14.5477    31.0000   125.0000    94.0000 
    133. 

  133.  69 5001     19934    19662.9  Left-UnsegmentedWhiteMatter      100.5646    14.0732    15.0000   133.0000   118.0000 
    134. 

  134.  70 5002     19569    19457.7  Right-UnsegmentedWhiteMatter     100.2598    13.4749    14.0000   135.0000   121.0000 
    135.