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ABIDE_fs-6.0.0
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0050319
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050319 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-623
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050319
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 16246.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 204631.537490, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 203802.246184, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 408433.783673, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1534180.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1542732.560362, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 06:40:04 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 23:58:28 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 23:58:28 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      1618     1655.7  wm-lh-bankssts                   103.2447     8.6370    79.0000   123.0000    44.0000 
    66. 

  66.   2 3002      2393     2356.0  wm-lh-caudalanteriorcingulate     99.7877    10.4915    42.0000   119.0000    77.0000 
    67. 

  67.   3 3003      6206     6212.8  wm-lh-caudalmiddlefrontal         98.6669     7.0703    77.0000   115.0000    38.0000 
    68. 

  68.   4 3005      2071     2079.8  wm-lh-cuneus                      94.9073    10.0815    72.0000   122.0000    50.0000 
    69. 

  69.   5 3006       659      690.6  wm-lh-entorhinal                  86.2656     8.6383    60.0000   126.0000    66.0000 
    70. 

  70.   6 3007      5643     5531.5  wm-lh-fusiform                    92.3994     9.3221    48.0000   115.0000    67.0000 
    71. 

  71.   7 3008      9658     9897.6  wm-lh-inferiorparietal           102.1672     8.2294    78.0000   123.0000    45.0000 
    72. 

  72.   8 3009      6074     6242.2  wm-lh-inferiortemporal            94.3029     9.1997    66.0000   135.0000    69.0000 
    73. 

  73.   9 3010      3212     3168.9  wm-lh-isthmuscingulate            99.0072    10.9035    39.0000   120.0000    81.0000 
    74. 

  74.  10 3011      7796     7941.8  wm-lh-lateraloccipital            94.8764     8.7276    71.0000   119.0000    48.0000 
    75. 

  75.  11 3012      7230     7213.2  wm-lh-lateralorbitofrontal        96.3420     7.8354    68.0000   119.0000    51.0000 
    76. 

  76.  12 3013      4781     4836.3  wm-lh-lingual                     86.6168     7.6458    51.0000   111.0000    60.0000 
    77. 

  77.  13 3014      4202     4184.8  wm-lh-medialorbitofrontal         88.1640    10.0656    27.0000   114.0000    87.0000 
    78. 

  78.  14 3015      5028     5212.2  wm-lh-middletemporal              96.7820     8.0663    69.0000   123.0000    54.0000 
    79. 

  79.  15 3016      1005     1147.7  wm-lh-parahippocampal             83.8816     6.7721    65.0000   102.0000    37.0000 
    80. 

  80.  16 3017      3189     3151.0  wm-lh-paracentral                 97.4613     7.0401    77.0000   123.0000    46.0000 
    81. 

  81.  17 3018      2990     3054.6  wm-lh-parsopercularis             96.1953     6.4504    74.0000   113.0000    39.0000 
    82. 

  82.  18 3019      1247     1307.6  wm-lh-parsorbitalis               93.6143     7.6334    71.0000   112.0000    41.0000 
    83. 

  83.  19 3020      2741     2775.7  wm-lh-parstriangularis            99.0066     7.7147    76.0000   116.0000    40.0000 
    84. 

  84.  20 3021      2824     2678.2  wm-lh-pericalcarine               88.5485    13.8945     7.0000   111.0000   104.0000 
    85. 

  85.  21 3022      7124     7487.6  wm-lh-postcentral                 99.4415     8.1923    77.0000   127.0000    50.0000 
    86. 

  86.  22 3023      4607     4502.7  wm-lh-posteriorcingulate          95.4645     8.4434    44.0000   118.0000    74.0000 
    87. 

  87.  23 3024     11284    11490.0  wm-lh-precentral                  98.8246     7.1573    75.0000   121.0000    46.0000 
    88. 

  88.  24 3025      9173     9153.3  wm-lh-precuneus                   98.9297     8.6096    21.0000   123.0000   102.0000 
    89. 

  89.  25 3026      2407     2338.0  wm-lh-rostralanteriorcingulate    94.1654    10.5332    53.0000   116.0000    63.0000 
    90. 

  90.  26 3027     11951    12137.5  wm-lh-rostralmiddlefrontal        97.7568     8.5413    71.0000   117.0000    46.0000 
    91. 

  91.  27 3028     16163    16435.7  wm-lh-superiorfrontal             98.8850     8.0760    74.0000   121.0000    47.0000 
    92. 

  92.  28 3029     10321    10460.9  wm-lh-superiorparietal            99.3793     7.8381    76.0000   124.0000    48.0000 
    93. 

  93.  29 3030      6923     7235.3  wm-lh-superiortemporal           100.1239     8.3801    72.0000   124.0000    52.0000 
    94. 

  94.  30 3031      8224     8437.3  wm-lh-supramarginal              102.0051     7.3962    79.0000   123.0000    44.0000 
    95. 

  95.  31 3032       241      249.6  wm-lh-frontalpole                 90.7303     6.7130    76.0000   108.0000    32.0000 
    96. 

  96.  32 3033       541      583.0  wm-lh-temporalpole                92.8096     7.0992    79.0000   113.0000    34.0000 
    97. 

  97.  33 3034       654      647.0  wm-lh-transversetemporal          94.9480     7.3818    78.0000   116.0000    38.0000 
    98. 

  98.  34 3035      9255     9210.6  wm-lh-insula                      93.6679     8.9251    39.0000   114.0000    75.0000 
    99. 

  99.  35 4001      2253     2274.9  wm-rh-bankssts                   103.6045     8.0818    80.0000   122.0000    42.0000 
    100. 

  100.  36 4002      2460     2470.0  wm-rh-caudalanteriorcingulate    100.6679     9.3488    53.0000   117.0000    64.0000 
    101. 

  101.  37 4003      5270     5295.5  wm-rh-caudalmiddlefrontal         98.1858     6.3090    76.0000   116.0000    40.0000 
    102. 

  102.  38 4005      2143     2139.7  wm-rh-cuneus                      94.9043     8.8748    72.0000   121.0000    49.0000 
    103. 

  103.  39 4006       488      517.8  wm-rh-entorhinal                  83.3217     6.6774    70.0000   107.0000    37.0000 
    104. 

  104.  40 4007      5945     5860.8  wm-rh-fusiform                    92.2521     9.0319    62.0000   124.0000    62.0000 
    105. 

  105.  41 4008     11359    11603.9  wm-rh-inferiorparietal           100.5027     8.9654    76.0000   124.0000    48.0000 
    106. 

  106.  42 4009      4786     4951.0  wm-rh-inferiortemporal            92.5591     8.3841    70.0000   119.0000    49.0000 
    107. 

  107.  43 4010      2547     2561.5  wm-rh-isthmuscingulate           100.8963    11.6358    44.0000   127.0000    83.0000 
    108. 

  108.  44 4011      9084     9304.1  wm-rh-lateraloccipital            95.8094     9.0234    69.0000   120.0000    51.0000 
    109. 

  109.  45 4012      7253     7318.7  wm-rh-lateralorbitofrontal        96.6061     7.7092    65.0000   115.0000    50.0000 
    110. 

  110.  46 4013      4402     4508.2  wm-rh-lingual                     87.5318     7.9296    43.0000   114.0000    71.0000 
    111. 

  111.  47 4014      3855     3904.8  wm-rh-medialorbitofrontal         93.9507     9.6433    55.0000   118.0000    63.0000 
    112. 

  112.  48 4015      5706     5869.4  wm-rh-middletemporal              96.1795     8.0088    72.0000   120.0000    48.0000 
    113. 

  113.  49 4016      1062     1132.5  wm-rh-parahippocampal             84.8917     8.4403    55.0000   111.0000    56.0000 
    114. 

  114.  50 4017      4684     4626.8  wm-rh-paracentral                 95.8702     6.4606    60.0000   118.0000    58.0000 
    115. 

  115.  51 4018      3375     3387.3  wm-rh-parsopercularis            101.4118     6.1848    81.0000   117.0000    36.0000 
    116. 

  116.  52 4019      1310     1384.4  wm-rh-parsorbitalis               95.3221     7.8895    76.0000   113.0000    37.0000 
    117. 

  117.  53 4020      2533     2598.5  wm-rh-parstriangularis           100.6423     7.8838    79.0000   118.0000    39.0000 
    118. 

  118.  54 4021      3335     3194.1  wm-rh-pericalcarine               89.1877    13.8429    12.0000   117.0000   105.0000 
    119. 

  119.  55 4022      6625     6968.6  wm-rh-postcentral                101.0175     7.5020    79.0000   128.0000    49.0000 
    120. 

  120.  56 4023      4101     4094.4  wm-rh-posteriorcingulate          94.8510     8.8530    40.0000   120.0000    80.0000 
    121. 

  121.  57 4024     10644    10869.3  wm-rh-precentral                  99.4163     7.1627    77.0000   126.0000    49.0000 
    122. 

  122.  58 4025      9193     9151.2  wm-rh-precuneus                   98.0456     9.0918    24.0000   123.0000    99.0000 
    123. 

  123.  59 4026      1999     1960.4  wm-rh-rostralanteriorcingulate    96.9735     9.8628    66.0000   115.0000    49.0000 
    124. 

  124.  60 4027     13355    13603.2  wm-rh-rostralmiddlefrontal        98.8085     8.4021    65.0000   122.0000    57.0000 
    125. 

  125.  61 4028     14317    14545.6  wm-rh-superiorfrontal             98.4027     7.9436    75.0000   121.0000    46.0000 
    126. 

  126.  62 4029      9143     9345.0  wm-rh-superiorparietal            99.3841     7.0782    77.0000   123.0000    46.0000 
    127. 

  127.  63 4030      5703     5959.7  wm-rh-superiortemporal           101.1248     9.1143    66.0000   126.0000    60.0000 
    128. 

  128.  64 4031      7302     7473.9  wm-rh-supramarginal              100.1264     8.0299    77.0000   123.0000    46.0000 
    129. 

  129.  65 4032       582      605.7  wm-rh-frontalpole                 97.3093     8.4740    75.0000   120.0000    45.0000 
    130. 

  130.  66 4033       676      696.8  wm-rh-temporalpole                89.2678     8.2746    64.0000   117.0000    53.0000 
    131. 

  131.  67 4034       515      493.5  wm-rh-transversetemporal          99.6932     7.4436    81.0000   120.0000    39.0000 
    132. 

  132.  68 4035     10251    10076.8  wm-rh-insula                      93.4360    10.5817    41.0000   123.0000    82.0000 
    133. 

  133.  69 5001     24105    24231.4  Left-UnsegmentedWhiteMatter       97.5854     9.4925    25.0000   119.0000    94.0000 
    134. 

  134.  70 5002     24637    24307.7  Right-UnsegmentedWhiteMatter      98.7010     9.6879    18.0000   126.0000   108.0000 
    135.