# Title Segmentation Statistics # # generating_program mri_segstats # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050319 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv # sysname Linux # hostname tars-623 # machine x86_64 # user ntraut # anatomy_type volume # # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0 # subjectname 0050319 # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 16246.000000, mm^3 # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 204631.537490, mm^3 # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 203802.246184, mm^3 # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 408433.783673, mm^3 # Measure Mask, MaskVol, Mask Volume, 1534180.000000, mm^3 # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1542732.560362, mm^3 # SegVolFile mri/wmparc.mgz # SegVolFileTimeStamp 2017/10/08 06:40:04 # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt # ColorTableTimeStamp 2017/01/18 23:00:02 # InVolFile mri/norm.mgz # InVolFileTimeStamp 2017/10/07 23:58:28 # InVolFrame 0 # PVVolFile mri/norm.mgz # PVVolFileTimeStamp 2017/10/07 23:58:28 # ExcludeSegId 0 # Only reporting non-empty segmentations # VoxelVolume_mm3 1 # TableCol 1 ColHeader Index # TableCol 1 FieldName Index # TableCol 1 Units NA # TableCol 2 ColHeader SegId # TableCol 2 FieldName Segmentation Id # TableCol 2 Units NA # TableCol 3 ColHeader NVoxels # TableCol 3 FieldName Number of Voxels # TableCol 3 Units unitless # TableCol 4 ColHeader Volume_mm3 # TableCol 4 FieldName Volume # TableCol 4 Units mm^3 # TableCol 5 ColHeader StructName # TableCol 5 FieldName Structure Name # TableCol 5 Units NA # TableCol 6 ColHeader normMean # TableCol 6 FieldName Intensity normMean # TableCol 6 Units MR # TableCol 7 ColHeader normStdDev # TableCol 7 FieldName Itensity normStdDev # TableCol 7 Units MR # TableCol 8 ColHeader normMin # TableCol 8 FieldName Intensity normMin # TableCol 8 Units MR # TableCol 9 ColHeader normMax # TableCol 9 FieldName Intensity normMax # TableCol 9 Units MR # TableCol 10 ColHeader normRange # TableCol 10 FieldName Intensity normRange # TableCol 10 Units MR # NRows 70 # NTableCols 10 # ColHeaders Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange 1 3001 1618 1655.7 wm-lh-bankssts 103.2447 8.6370 79.0000 123.0000 44.0000 2 3002 2393 2356.0 wm-lh-caudalanteriorcingulate 99.7877 10.4915 42.0000 119.0000 77.0000 3 3003 6206 6212.8 wm-lh-caudalmiddlefrontal 98.6669 7.0703 77.0000 115.0000 38.0000 4 3005 2071 2079.8 wm-lh-cuneus 94.9073 10.0815 72.0000 122.0000 50.0000 5 3006 659 690.6 wm-lh-entorhinal 86.2656 8.6383 60.0000 126.0000 66.0000 6 3007 5643 5531.5 wm-lh-fusiform 92.3994 9.3221 48.0000 115.0000 67.0000 7 3008 9658 9897.6 wm-lh-inferiorparietal 102.1672 8.2294 78.0000 123.0000 45.0000 8 3009 6074 6242.2 wm-lh-inferiortemporal 94.3029 9.1997 66.0000 135.0000 69.0000 9 3010 3212 3168.9 wm-lh-isthmuscingulate 99.0072 10.9035 39.0000 120.0000 81.0000 10 3011 7796 7941.8 wm-lh-lateraloccipital 94.8764 8.7276 71.0000 119.0000 48.0000 11 3012 7230 7213.2 wm-lh-lateralorbitofrontal 96.3420 7.8354 68.0000 119.0000 51.0000 12 3013 4781 4836.3 wm-lh-lingual 86.6168 7.6458 51.0000 111.0000 60.0000 13 3014 4202 4184.8 wm-lh-medialorbitofrontal 88.1640 10.0656 27.0000 114.0000 87.0000 14 3015 5028 5212.2 wm-lh-middletemporal 96.7820 8.0663 69.0000 123.0000 54.0000 15 3016 1005 1147.7 wm-lh-parahippocampal 83.8816 6.7721 65.0000 102.0000 37.0000 16 3017 3189 3151.0 wm-lh-paracentral 97.4613 7.0401 77.0000 123.0000 46.0000 17 3018 2990 3054.6 wm-lh-parsopercularis 96.1953 6.4504 74.0000 113.0000 39.0000 18 3019 1247 1307.6 wm-lh-parsorbitalis 93.6143 7.6334 71.0000 112.0000 41.0000 19 3020 2741 2775.7 wm-lh-parstriangularis 99.0066 7.7147 76.0000 116.0000 40.0000 20 3021 2824 2678.2 wm-lh-pericalcarine 88.5485 13.8945 7.0000 111.0000 104.0000 21 3022 7124 7487.6 wm-lh-postcentral 99.4415 8.1923 77.0000 127.0000 50.0000 22 3023 4607 4502.7 wm-lh-posteriorcingulate 95.4645 8.4434 44.0000 118.0000 74.0000 23 3024 11284 11490.0 wm-lh-precentral 98.8246 7.1573 75.0000 121.0000 46.0000 24 3025 9173 9153.3 wm-lh-precuneus 98.9297 8.6096 21.0000 123.0000 102.0000 25 3026 2407 2338.0 wm-lh-rostralanteriorcingulate 94.1654 10.5332 53.0000 116.0000 63.0000 26 3027 11951 12137.5 wm-lh-rostralmiddlefrontal 97.7568 8.5413 71.0000 117.0000 46.0000 27 3028 16163 16435.7 wm-lh-superiorfrontal 98.8850 8.0760 74.0000 121.0000 47.0000 28 3029 10321 10460.9 wm-lh-superiorparietal 99.3793 7.8381 76.0000 124.0000 48.0000 29 3030 6923 7235.3 wm-lh-superiortemporal 100.1239 8.3801 72.0000 124.0000 52.0000 30 3031 8224 8437.3 wm-lh-supramarginal 102.0051 7.3962 79.0000 123.0000 44.0000 31 3032 241 249.6 wm-lh-frontalpole 90.7303 6.7130 76.0000 108.0000 32.0000 32 3033 541 583.0 wm-lh-temporalpole 92.8096 7.0992 79.0000 113.0000 34.0000 33 3034 654 647.0 wm-lh-transversetemporal 94.9480 7.3818 78.0000 116.0000 38.0000 34 3035 9255 9210.6 wm-lh-insula 93.6679 8.9251 39.0000 114.0000 75.0000 35 4001 2253 2274.9 wm-rh-bankssts 103.6045 8.0818 80.0000 122.0000 42.0000 36 4002 2460 2470.0 wm-rh-caudalanteriorcingulate 100.6679 9.3488 53.0000 117.0000 64.0000 37 4003 5270 5295.5 wm-rh-caudalmiddlefrontal 98.1858 6.3090 76.0000 116.0000 40.0000 38 4005 2143 2139.7 wm-rh-cuneus 94.9043 8.8748 72.0000 121.0000 49.0000 39 4006 488 517.8 wm-rh-entorhinal 83.3217 6.6774 70.0000 107.0000 37.0000 40 4007 5945 5860.8 wm-rh-fusiform 92.2521 9.0319 62.0000 124.0000 62.0000 41 4008 11359 11603.9 wm-rh-inferiorparietal 100.5027 8.9654 76.0000 124.0000 48.0000 42 4009 4786 4951.0 wm-rh-inferiortemporal 92.5591 8.3841 70.0000 119.0000 49.0000 43 4010 2547 2561.5 wm-rh-isthmuscingulate 100.8963 11.6358 44.0000 127.0000 83.0000 44 4011 9084 9304.1 wm-rh-lateraloccipital 95.8094 9.0234 69.0000 120.0000 51.0000 45 4012 7253 7318.7 wm-rh-lateralorbitofrontal 96.6061 7.7092 65.0000 115.0000 50.0000 46 4013 4402 4508.2 wm-rh-lingual 87.5318 7.9296 43.0000 114.0000 71.0000 47 4014 3855 3904.8 wm-rh-medialorbitofrontal 93.9507 9.6433 55.0000 118.0000 63.0000 48 4015 5706 5869.4 wm-rh-middletemporal 96.1795 8.0088 72.0000 120.0000 48.0000 49 4016 1062 1132.5 wm-rh-parahippocampal 84.8917 8.4403 55.0000 111.0000 56.0000 50 4017 4684 4626.8 wm-rh-paracentral 95.8702 6.4606 60.0000 118.0000 58.0000 51 4018 3375 3387.3 wm-rh-parsopercularis 101.4118 6.1848 81.0000 117.0000 36.0000 52 4019 1310 1384.4 wm-rh-parsorbitalis 95.3221 7.8895 76.0000 113.0000 37.0000 53 4020 2533 2598.5 wm-rh-parstriangularis 100.6423 7.8838 79.0000 118.0000 39.0000 54 4021 3335 3194.1 wm-rh-pericalcarine 89.1877 13.8429 12.0000 117.0000 105.0000 55 4022 6625 6968.6 wm-rh-postcentral 101.0175 7.5020 79.0000 128.0000 49.0000 56 4023 4101 4094.4 wm-rh-posteriorcingulate 94.8510 8.8530 40.0000 120.0000 80.0000 57 4024 10644 10869.3 wm-rh-precentral 99.4163 7.1627 77.0000 126.0000 49.0000 58 4025 9193 9151.2 wm-rh-precuneus 98.0456 9.0918 24.0000 123.0000 99.0000 59 4026 1999 1960.4 wm-rh-rostralanteriorcingulate 96.9735 9.8628 66.0000 115.0000 49.0000 60 4027 13355 13603.2 wm-rh-rostralmiddlefrontal 98.8085 8.4021 65.0000 122.0000 57.0000 61 4028 14317 14545.6 wm-rh-superiorfrontal 98.4027 7.9436 75.0000 121.0000 46.0000 62 4029 9143 9345.0 wm-rh-superiorparietal 99.3841 7.0782 77.0000 123.0000 46.0000 63 4030 5703 5959.7 wm-rh-superiortemporal 101.1248 9.1143 66.0000 126.0000 60.0000 64 4031 7302 7473.9 wm-rh-supramarginal 100.1264 8.0299 77.0000 123.0000 46.0000 65 4032 582 605.7 wm-rh-frontalpole 97.3093 8.4740 75.0000 120.0000 45.0000 66 4033 676 696.8 wm-rh-temporalpole 89.2678 8.2746 64.0000 117.0000 53.0000 67 4034 515 493.5 wm-rh-transversetemporal 99.6932 7.4436 81.0000 120.0000 39.0000 68 4035 10251 10076.8 wm-rh-insula 93.4360 10.5817 41.0000 123.0000 82.0000 69 5001 24105 24231.4 Left-UnsegmentedWhiteMatter 97.5854 9.4925 25.0000 119.0000 94.0000 70 5002 24637 24307.7 Right-UnsegmentedWhiteMatter 98.7010 9.6879 18.0000 126.0000 108.0000