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ABIDE_fs-6.0.0
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0050462
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050462 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-200
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050462
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 25902.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 253545.682727, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 253814.589057, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 507360.271784, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1807119.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1802205.004966, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 09:25:19 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/08 01:48:44 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/08 01:48:44 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2595     2594.7  wm-lh-bankssts                    98.1360     7.3387    71.0000   119.0000    48.0000 
    66. 

  66.   2 3002      2903     2934.7  wm-lh-caudalanteriorcingulate    102.9507     7.6688    62.0000   117.0000    55.0000 
    67. 

  67.   3 3003      7989     7967.6  wm-lh-caudalmiddlefrontal         98.5526     7.7845    72.0000   117.0000    45.0000 
    68. 

  68.   4 3005      2256     2266.1  wm-lh-cuneus                      92.5368    11.2434    61.0000   115.0000    54.0000 
    69. 

  69.   5 3006      1189     1240.8  wm-lh-entorhinal                  84.7527    10.2889    59.0000   107.0000    48.0000 
    70. 

  70.   6 3007      6609     6635.0  wm-lh-fusiform                    92.6502     9.2412    48.0000   117.0000    69.0000 
    71. 

  71.   7 3008      8385     8504.5  wm-lh-inferiorparietal            99.9451     8.6215    72.0000   118.0000    46.0000 
    72. 

  72.   8 3009      7422     7470.6  wm-lh-inferiortemporal            90.8281     9.9423    61.0000   115.0000    54.0000 
    73. 

  73.   9 3010      4771     4848.2  wm-lh-isthmuscingulate           101.6825    10.4463    24.0000   121.0000    97.0000 
    74. 

  74.  10 3011      9272     9501.3  wm-lh-lateraloccipital            93.3181    10.0234    62.0000   115.0000    53.0000 
    75. 

  75.  11 3012      7284     7222.8  wm-lh-lateralorbitofrontal        96.8055     9.7462    60.0000   119.0000    59.0000 
    76. 

  76.  12 3013      5186     5267.1  wm-lh-lingual                     91.1120    10.5376    49.0000   117.0000    68.0000 
    77. 

  77.  13 3014      4474     4465.9  wm-lh-medialorbitofrontal         94.0456    11.4676    40.0000   119.0000    79.0000 
    78. 

  78.  14 3015      6028     6248.7  wm-lh-middletemporal              95.0126     8.5980    68.0000   117.0000    49.0000 
    79. 

  79.  15 3016      1573     1653.7  wm-lh-parahippocampal             92.0852     7.5396    58.0000   111.0000    53.0000 
    80. 

  80.  16 3017      4396     4398.6  wm-lh-paracentral                 95.5189     7.1494    70.0000   110.0000    40.0000 
    81. 

  81.  17 3018      5466     5499.2  wm-lh-parsopercularis            102.5816     8.7605    74.0000   121.0000    47.0000 
    82. 

  82.  18 3019      1022     1032.0  wm-lh-parsorbitalis               93.3845     9.1267    70.0000   114.0000    44.0000 
    83. 

  83.  19 3020      3997     4044.2  wm-lh-parstriangularis           102.4166     8.0748    74.0000   121.0000    47.0000 
    84. 

  84.  20 3021      3231     3084.4  wm-lh-pericalcarine               92.6682    10.5396    63.0000   118.0000    55.0000 
    85. 

  85.  21 3022      8030     8263.1  wm-lh-postcentral                 95.9274     9.1755    71.0000   120.0000    49.0000 
    86. 

  86.  22 3023      5533     5564.2  wm-lh-posteriorcingulate         100.5588     8.7809    41.0000   119.0000    78.0000 
    87. 

  87.  23 3024     14120    14316.1  wm-lh-precentral                  97.4623     7.9824    68.0000   119.0000    51.0000 
    88. 

  88.  24 3025      9286     9389.8  wm-lh-precuneus                   99.6976     8.6799    24.0000   119.0000    95.0000 
    89. 

  89.  25 3026      2992     2917.9  wm-lh-rostralanteriorcingulate    98.0013    12.5884    31.0000   140.0000   109.0000 
    90. 

  90.  26 3027     14970    15036.7  wm-lh-rostralmiddlefrontal        98.4193     9.2794    63.0000   120.0000    57.0000 
    91. 

  91.  27 3028     20741    20912.9  wm-lh-superiorfrontal             93.7589     8.9986    64.0000   115.0000    51.0000 
    92. 

  92.  28 3029     11522    11732.9  wm-lh-superiorparietal            99.4048     8.0120    71.0000   119.0000    48.0000 
    93. 

  93.  29 3030      8310     8624.2  wm-lh-superiortemporal            96.9051     8.6202    64.0000   120.0000    56.0000 
    94. 

  94.  30 3031      9694     9846.3  wm-lh-supramarginal               99.3035     8.7965    70.0000   118.0000    48.0000 
    95. 

  95.  31 3032       284      283.7  wm-lh-frontalpole                 91.4225     8.8588    72.0000   109.0000    37.0000 
    96. 

  96.  32 3033       593      632.4  wm-lh-temporalpole                80.5599     8.8861    60.0000   114.0000    54.0000 
    97. 

  97.  33 3034       689      731.2  wm-lh-transversetemporal          95.6546     5.8272    80.0000   109.0000    29.0000 
    98. 

  98.  34 3035     11761    11649.4  wm-lh-insula                      94.0133    10.2991    52.0000   117.0000    65.0000 
    99. 

  99.  35 4001      2981     2979.6  wm-rh-bankssts                   102.5830     6.7210    77.0000   116.0000    39.0000 
    100. 

  100.  36 4002      3065     3114.4  wm-rh-caudalanteriorcingulate    101.9794     8.8176    53.0000   123.0000    70.0000 
    101. 

  101.  37 4003      8043     7933.0  wm-rh-caudalmiddlefrontal         94.8134     9.1892    65.0000   114.0000    49.0000 
    102. 

  102.  38 4005      2213     2251.4  wm-rh-cuneus                      86.8888     9.6354    57.0000   112.0000    55.0000 
    103. 

  103.  39 4006       805      851.6  wm-rh-entorhinal                  81.6435     7.8277    64.0000   100.0000    36.0000 
    104. 

  104.  40 4007      6119     6139.8  wm-rh-fusiform                    91.6076     9.1747    41.0000   115.0000    74.0000 
    105. 

  105.  41 4008     11158    11282.9  wm-rh-inferiorparietal            97.3694     9.6106    67.0000   120.0000    53.0000 
    106. 

  106.  42 4009      6693     6773.1  wm-rh-inferiortemporal            91.0003    10.0547    61.0000   112.0000    51.0000 
    107. 

  107.  43 4010      3735     3809.5  wm-rh-isthmuscingulate           101.6929     8.5855    39.0000   117.0000    78.0000 
    108. 

  108.  44 4011     10252    10467.2  wm-rh-lateraloccipital            90.4186    10.7782    58.0000   118.0000    60.0000 
    109. 

  109.  45 4012      7130     7110.2  wm-rh-lateralorbitofrontal        96.6877    10.7950    60.0000   120.0000    60.0000 
    110. 

  110.  46 4013      5979     5985.6  wm-rh-lingual                     88.9967    10.9506    23.0000   118.0000    95.0000 
    111. 

  111.  47 4014      4354     4393.4  wm-rh-medialorbitofrontal         96.3822    13.3960    31.0000   119.0000    88.0000 
    112. 

  112.  48 4015      7050     7292.5  wm-rh-middletemporal              93.9630    10.5745    64.0000   118.0000    54.0000 
    113. 

  113.  49 4016      1680     1762.9  wm-rh-parahippocampal             90.9940     7.3267    60.0000   109.0000    49.0000 
    114. 

  114.  50 4017      4400     4412.0  wm-rh-paracentral                 94.7839     7.2891    68.0000   111.0000    43.0000 
    115. 

  115.  51 4018      3803     3785.1  wm-rh-parsopercularis             94.6374     9.7607    66.0000   114.0000    48.0000 
    116. 

  116.  52 4019      1238     1243.7  wm-rh-parsorbitalis               93.6405     9.4823    69.0000   119.0000    50.0000 
    117. 

  117.  53 4020      3273     3291.4  wm-rh-parstriangularis            97.4522     8.7122    69.0000   115.0000    46.0000 
    118. 

  118.  54 4021      3338     3129.0  wm-rh-pericalcarine               86.0815     9.7529    59.0000   112.0000    53.0000 
    119. 

  119.  55 4022      7941     8194.8  wm-rh-postcentral                 95.3933     8.3000    72.0000   116.0000    44.0000 
    120. 

  120.  56 4023      4330     4305.0  wm-rh-posteriorcingulate          99.8432     8.0816    49.0000   121.0000    72.0000 
    121. 

  121.  57 4024     15072    15110.2  wm-rh-precentral                  95.8731     7.7236    67.0000   115.0000    48.0000 
    122. 

  122.  58 4025     11981    11931.6  wm-rh-precuneus                   97.7485     8.6489    24.0000   118.0000    94.0000 
    123. 

  123.  59 4026      2056     1995.3  wm-rh-rostralanteriorcingulate    98.7806    11.1704    64.0000   122.0000    58.0000 
    124. 

  124.  60 4027     14103    14417.9  wm-rh-rostralmiddlefrontal        99.2131     9.1036    65.0000   119.0000    54.0000 
    125. 

  125.  61 4028     21415    21490.7  wm-rh-superiorfrontal             94.6006     9.3239    62.0000   120.0000    58.0000 
    126. 

  126.  62 4029     12152    12359.9  wm-rh-superiorparietal            95.5093     9.1224    67.0000   119.0000    52.0000 
    127. 

  127.  63 4030      7147     7421.3  wm-rh-superiortemporal            93.1883    10.1721    62.0000   120.0000    58.0000 
    128. 

  128.  64 4031      8825     8933.3  wm-rh-supramarginal              101.9073     8.6032    75.0000   122.0000    47.0000 
    129. 

  129.  65 4032       444      477.8  wm-rh-frontalpole                 99.2297     8.1005    78.0000   116.0000    38.0000 
    130. 

  130.  66 4033       602      610.0  wm-rh-temporalpole                79.5731     8.1852    62.0000   102.0000    40.0000 
    131. 

  131.  67 4034       583      562.7  wm-rh-transversetemporal          95.6261     8.0249    75.0000   111.0000    36.0000 
    132. 

  132.  68 4035     11197    11044.7  wm-rh-insula                      91.3514    11.4298    28.0000   117.0000    89.0000 
    133. 

  133.  69 5001     37134    37102.0  Left-UnsegmentedWhiteMatter      100.6411     9.7254    19.0000   123.0000   104.0000 
    134. 

  134.  70 5002     37172    37395.9  Right-UnsegmentedWhiteMatter     100.5644     9.7110    12.0000   122.0000   110.0000 
    135.