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@@ -1,3 +1,16 @@
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# brainwithoutv1
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-Structural and functional MRI data from animal with bilateral damage to visual cortex to accompany paper.
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+This repository contains the raw MRI data to accompany the manuscript 'Preserved extrastriate visual network in a monkey with substantial, naturally occurring damage to primary visual cortex'.
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+The data supplied are T1-weighted structural images divided by T2-weighted SPACE images. Resolution is 0.5mm isotropic. More details can be found in the paper. These data are used in Figures 1 and 3.
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+Functional MRI data are supplied in NIFTI_GZ format for 4 animals: Animal S (with damage) and 3 control animals. Resolution is 1.0 mm isotropic with a TR of 2.0 seconds. Additional details can be found in the manuscript.
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+Stimulus for 'checker' runs is a flickering checkerboard contrasted with grey screen.
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+Stimulus for 'motion' runs is moving dots contrasted with stationary dots.
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+All experiments are 30 seconds 'on'; 30 seconds 'off' and start with an 'on' period.
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+Structural images for the fMRI are also included in the directory for registration purposes. Note these structural images were not used for any of the quantitative analyses.
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+fMRI data were used for Figures 4, 5, 6, 7 and 8.
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