Balazs Hangya преди 4 години
родител
ревизия
58618e0774
променени са 2 файла, в които са добавени 24 реда и са изтрити 0 реда
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+Description of data
+
+Validation data provided here was used to generate figures for 'OPETH: Open Source Solution for Real-time Peri-event Time Histogram Based on Open Ephys' by András Széll, Sergio Martínez-Bellver, Panna Hegedüs and Balázs Hangya, depositied on bioRxiv:
+https://www.biorxiv.org/content/10.1101/783688v1
+
+The experimental data is provided in Cellbase format. CellBase software is a Matlab-based, open source data handling and analysis tool, and available at
+https://github.com/hangyabalazs/CellBase
+See CellBase documentation for details on variable structure.
+
+The Behaviour/<sessionID> folder contains tetrode recordings in a behavioural recording sesssion:
+event.mat contains TTL event timestamps.
+TT1.mat, TT2.mat,... contains spike data from each tetrode.
+TT1_1.mat,... contains spike data after spike sorting in MClust (A.D.Redish).
+DBO07_190826a.mat contains raw behavioural data.
+TrialEvents.mat contains Trial events structure (see CellBase).
+StimEvents.mat contains Stimulus events structure (see CellBase).
+EVENTSPIKES and STIMSPIKES files contain pre-aligned spike times (see CellBase).
+The Tagging/<sessionID> folders contain tetrode recordings in optogenetic tagging sesssions in the same format.
+
+--- oo ---
+
+Description of code
+
+lightpsth.m is included, which was used to calculated light-triggered PETH for unsorted tetrode data offline. All other code, including offline PETH tools for sorted data are part of MClust 3.5 (A.D Redish) or CellBase software packagages, available online.