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natfeedback_code_eLife
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pickles
Martin Spacek e15e47543b Update README.md, add /csv, /pickles and /stats README.md files %!s(int64=2) %!d(string=hai) anos
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negntsrmvis 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
ntsrmvis 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
README.md e15e47543b Update README.md, add /csv, /pickles and /stats README.md files %!s(int64=2) %!d(string=hai) anos
bestgrtresp.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
bestmviresp.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
cellscreenpos.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
celltype.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
fig1.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
fig1S33S1.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
fig2.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
fig3.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
fig4.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
fig5.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
fig5S2.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
fig6.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
fits.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
grtFMI.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
grtRMI.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
grtmseustrs.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
grtresp.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
grttunresp.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
ipos_opto.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
ipos_st8.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
iposmi.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
maxFMI.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
maxRMI.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
mviFMI.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
mviRMI.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
mvigrtmsustrs.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
mvimseustrs.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
mviresp.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
runspeed.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
sampfits.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
sponresp.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos
upos.pickle 1c15e1f2f2 Initial commit copied over from natfeedback_code 2022-02-07 rev 9eabb0 %!s(int64=2) %!d(string=hai) anos

README.md

These are Python3 pickles of pandas DataFrames or lists of Python strings which locally store all relevant data.

datacite.yml
Title Robust effects of corticothalamic feedback and behavioral state on movie responses in mouse dLGN
Authors Spacek,Martin;LMU Munich;0000-0002-9519-3284
Crombie,Davide;LMU Munich;0000-0003-3424-3249
Bauer,Yannik;LMU Munich;0000-0003-2613-6443
Born,Gergory;LMU Munich;0000-0003-0430-3052
Liu,Xinyu;LMU Munich;0000-0002-3527-6168
Katzner,Steffen;LMU Munich;0000-0002-4424-2197
Busse,Laura;LMU Munich;0000-0002-6127-7754
Description Data and Python code for regenerating plots in Spacek et. al., 2022, published in eLife (https://doi.org/10.7554/eLife.70469). Use `main.py` to load data for all LGN optogenetic experiments as a function of stimulus type (movies, gratings), run state, and opto state. Data are loaded from pandas DataFrames, which are saved as Python pickles. Statistics are computed using the included R code.
License Creative Commons Attribution 4.0 International Public License (https://creativecommons.org/licenses/by/4.0/)
References Spacek, M. A., Crombie, D., Bauer, Y., Born, G., Liu, X., Katzner, S., Busse, L. Robust effects of corticothalamic feedback and behavioral state on movie responses in mouse dLGN. eLife 11:e70469 (2022) [doi:10.7554/eLife.70469] (IsSupplementTo)
Funding DFG, SFB 1233 TP 13, project number 276693517
DFG, SFB 870 TP 19, project number 118803580
DFG, BU 1808/5-1
Joachim Herz Stiftung (Joachim Herz Foundation)
Keywords lateral geniculate nucleus
corticothalamic feedback
naturalistic movies
locomotion
pupil dilation
firing mode
Resource Type Dataset