NAcVP2018/MatlabScripts/Supporting Programs/colormaps.m

function [magma,inferno,plasma,viridis]=colormaps

%allows use of the colormaps as seen in
%http://medvis.org/2016/02/23/better-than-the-rainbow-the-matplotlib-alternative-colormaps/

magma = [0.001462 0.000466 0.013866;
               0.002258 0.001295 0.018331;
               0.003279 0.002305 0.023708;
               0.004512 0.003490 0.029965;
               0.005950 0.004843 0.037130;
               0.007588 0.006356 0.044973;
               0.009426 0.008022 0.052844;
               0.011465 0.009828 0.060750;
               0.013708 0.011771 0.068667;
               0.016156 0.013840 0.076603;
               0.018815 0.016026 0.084584;
               0.021692 0.018320 0.092610;
               0.024792 0.020715 0.100676;
               0.028123 0.023201 0.108787;
               0.031696 0.025765 0.116965;
               0.035520 0.028397 0.125209;
               0.039608 0.031090 0.133515;
               0.043830 0.033830 0.141886;
               0.048062 0.036607 0.150327;
               0.052320 0.039407 0.158841;
               0.056615 0.042160 0.167446;
               0.060949 0.044794 0.176129;
               0.065330 0.047318 0.184892;
               0.069764 0.049726 0.193735;
               0.074257 0.052017 0.202660;
               0.078815 0.054184 0.211667;
               0.083446 0.056225 0.220755;
               0.088155 0.058133 0.229922;
               0.092949 0.059904 0.239164;
               0.097833 0.061531 0.248477;
               0.102815 0.063010 0.257854;
               0.107899 0.064335 0.267289;
               0.113094 0.065492 0.276784;
               0.118405 0.066479 0.286321;
               0.123833 0.067295 0.295879;
               0.129380 0.067935 0.305443;
               0.135053 0.068391 0.315000;
               0.140858 0.068654 0.324538;
               0.146785 0.068738 0.334011;
               0.152839 0.068637 0.343404;
               0.159018 0.068354 0.352688;
               0.165308 0.067911 0.361816;
               0.171713 0.067305 0.370771;
               0.178212 0.066576 0.379497;
               0.184801 0.065732 0.387973;
               0.191460 0.064818 0.396152;
               0.198177 0.063862 0.404009;
               0.204935 0.062907 0.411514;
               0.211718 0.061992 0.418647;
               0.218512 0.061158 0.425392;
               0.225302 0.060445 0.431742;
               0.232077 0.059889 0.437695;
               0.238826 0.059517 0.443256;
               0.245543 0.059352 0.448436;
               0.252220 0.059415 0.453248;
               0.258857 0.059706 0.457710;
               0.265447 0.060237 0.461840;
               0.271994 0.060994 0.465660;
               0.278493 0.061978 0.469190;
               0.284951 0.063168 0.472451;
               0.291366 0.064553 0.475462;
               0.297740 0.066117 0.478243;
               0.304081 0.067835 0.480812;
               0.310382 0.069702 0.483186;
               0.316654 0.071690 0.485380;
               0.322899 0.073782 0.487408;
               0.329114 0.075972 0.489287;
               0.335308 0.078236 0.491024;
               0.341482 0.080564 0.492631;
               0.347636 0.082946 0.494121;
               0.353773 0.085373 0.495501;
               0.359898 0.087831 0.496778;
               0.366012 0.090314 0.497960;
               0.372116 0.092816 0.499053;
               0.378211 0.095332 0.500067;
               0.384299 0.097855 0.501002;
               0.390384 0.100379 0.501864;
               0.396467 0.102902 0.502658;
               0.402548 0.105420 0.503386;
               0.408629 0.107930 0.504052;
               0.414709 0.110431 0.504662;
               0.420791 0.112920 0.505215;
               0.426877 0.115395 0.505714;
               0.432967 0.117855 0.506160;
               0.439062 0.120298 0.506555;
               0.445163 0.122724 0.506901;
               0.451271 0.125132 0.507198;
               0.457386 0.127522 0.507448;
               0.463508 0.129893 0.507652;
               0.469640 0.132245 0.507809;
               0.475780 0.134577 0.507921;
               0.481929 0.136891 0.507989;
               0.488088 0.139186 0.508011;
               0.494258 0.141462 0.507988;
               0.500438 0.143719 0.507920;
               0.506629 0.145958 0.507806;
               0.512831 0.148179 0.507648;
               0.519045 0.150383 0.507443;
               0.525270 0.152569 0.507192;
               0.531507 0.154739 0.506895;
               0.537755 0.156894 0.506551;
               0.544015 0.159033 0.506159;
               0.550287 0.161158 0.505719;
               0.556571 0.163269 0.505230;
               0.562866 0.165368 0.504692;
               0.569172 0.167454 0.504105;
               0.575490 0.169530 0.503466;
               0.581819 0.171596 0.502777;
               0.588158 0.173652 0.502035;
               0.594508 0.175701 0.501241;
               0.600868 0.177743 0.500394;
               0.607238 0.179779 0.499492;
               0.613617 0.181811 0.498536;
               0.620005 0.183840 0.497524;
               0.626401 0.185867 0.496456;
               0.632805 0.187893 0.495332;
               0.639216 0.189921 0.494150;
               0.645633 0.191952 0.492910;
               0.652056 0.193986 0.491611;
               0.658483 0.196027 0.490253;
               0.664915 0.198075 0.488836;
               0.671349 0.200133 0.487358;
               0.677786 0.202203 0.485819;
               0.684224 0.204286 0.484219;
               0.690661 0.206384 0.482558;
               0.697098 0.208501 0.480835;
               0.703532 0.210638 0.479049;
               0.709962 0.212797 0.477201;
               0.716387 0.214982 0.475290;
               0.722805 0.217194 0.473316;
               0.729216 0.219437 0.471279;
               0.735616 0.221713 0.469180;
               0.742004 0.224025 0.467018;
               0.748378 0.226377 0.464794;
               0.754737 0.228772 0.462509;
               0.761077 0.231214 0.460162;
               0.767398 0.233705 0.457755;
               0.773695 0.236249 0.455289;
               0.779968 0.238851 0.452765;
               0.786212 0.241514 0.450184;
               0.792427 0.244242 0.447543;
               0.798608 0.247040 0.444848;
               0.804752 0.249911 0.442102;
               0.810855 0.252861 0.439305;
               0.816914 0.255895 0.436461;
               0.822926 0.259016 0.433573;
               0.828886 0.262229 0.430644;
               0.834791 0.265540 0.427671;
               0.840636 0.268953 0.424666;
               0.846416 0.272473 0.421631;
               0.852126 0.276106 0.418573;
               0.857763 0.279857 0.415496;
               0.863320 0.283729 0.412403;
               0.868793 0.287728 0.409303;
               0.874176 0.291859 0.406205;
               0.879464 0.296125 0.403118;
               0.884651 0.300530 0.400047;
               0.889731 0.305079 0.397002;
               0.894700 0.309773 0.393995;
               0.899552 0.314616 0.391037;
               0.904281 0.319610 0.388137;
               0.908884 0.324755 0.385308;
               0.913354 0.330052 0.382563;
               0.917689 0.335500 0.379915;
               0.921884 0.341098 0.377376;
               0.925937 0.346844 0.374959;
               0.929845 0.352734 0.372677;
               0.933606 0.358764 0.370541;
               0.937221 0.364929 0.368567;
               0.940687 0.371224 0.366762;
               0.944006 0.377643 0.365136;
               0.947180 0.384178 0.363701;
               0.950210 0.390820 0.362468;
               0.953099 0.397563 0.361438;
               0.955849 0.404400 0.360619;
               0.958464 0.411324 0.360014;
               0.960949 0.418323 0.359630;
               0.963310 0.425390 0.359469;
               0.965549 0.432519 0.359529;
               0.967671 0.439703 0.359810;
               0.969680 0.446936 0.360311;
               0.971582 0.454210 0.361030;
               0.973381 0.461520 0.361965;
               0.975082 0.468861 0.363111;
               0.976690 0.476226 0.364466;
               0.978210 0.483612 0.366025;
               0.979645 0.491014 0.367783;
               0.981000 0.498428 0.369734;
               0.982279 0.505851 0.371874;
               0.983485 0.513280 0.374198;
               0.984622 0.520713 0.376698;
               0.985693 0.528148 0.379371;
               0.986700 0.535582 0.382210;
               0.987646 0.543015 0.385210;
               0.988533 0.550446 0.388365;
               0.989363 0.557873 0.391671;
               0.990138 0.565296 0.395122;
               0.990871 0.572706 0.398714;
               0.991558 0.580107 0.402441;
               0.992196 0.587502 0.406299;
               0.992785 0.594891 0.410283;
               0.993326 0.602275 0.414390;
               0.993834 0.609644 0.418613;
               0.994309 0.616999 0.422950;
               0.994738 0.624350 0.427397;
               0.995122 0.631696 0.431951;
               0.995480 0.639027 0.436607;
               0.995810 0.646344 0.441361;
               0.996096 0.653659 0.446213;
               0.996341 0.660969 0.451160;
               0.996580 0.668256 0.456192;
               0.996775 0.675541 0.461314;
               0.996925 0.682828 0.466526;
               0.997077 0.690088 0.471811;
               0.997186 0.697349 0.477182;
               0.997254 0.704611 0.482635;
               0.997325 0.711848 0.488154;
               0.997351 0.719089 0.493755;
               0.997351 0.726324 0.499428;
               0.997341 0.733545 0.505167;
               0.997285 0.740772 0.510983;
               0.997228 0.747981 0.516859;
               0.997138 0.755190 0.522806;
               0.997019 0.762398 0.528821;
               0.996898 0.769591 0.534892;
               0.996727 0.776795 0.541039;
               0.996571 0.783977 0.547233;
               0.996369 0.791167 0.553499;
               0.996162 0.798348 0.559820;
               0.995932 0.805527 0.566202;
               0.995680 0.812706 0.572645;
               0.995424 0.819875 0.579140;
               0.995131 0.827052 0.585701;
               0.994851 0.834213 0.592307;
               0.994524 0.841387 0.598983;
               0.994222 0.848540 0.605696;
               0.993866 0.855711 0.612482;
               0.993545 0.862859 0.619299;
               0.993170 0.870024 0.626189;
               0.992831 0.877168 0.633109;
               0.992440 0.884330 0.640099;
               0.992089 0.891470 0.647116;
               0.991688 0.898627 0.654202;
               0.991332 0.905763 0.661309;
               0.990930 0.912915 0.668481;
               0.990570 0.920049 0.675675;
               0.990175 0.927196 0.682926;
               0.989815 0.934329 0.690198;
               0.989434 0.941470 0.697519;
               0.989077 0.948604 0.704863;
               0.988717 0.955742 0.712242;
               0.988367 0.962878 0.719649;
               0.988033 0.970012 0.727077;
               0.987691 0.977154 0.734536;
               0.987387 0.984288 0.742002;
               0.987053 0.991438 0.749504];
           
           
inferno = [0.001462 0.000466 0.013866;
                 0.002267 0.001270 0.018570;
                 0.003299 0.002249 0.024239;
                 0.004547 0.003392 0.030909;
                 0.006006 0.004692 0.038558;
                 0.007676 0.006136 0.046836;
                 0.009561 0.007713 0.055143;
                 0.011663 0.009417 0.063460;
                 0.013995 0.011225 0.071862;
                 0.016561 0.013136 0.080282;
                 0.019373 0.015133 0.088767;
                 0.022447 0.017199 0.097327;
                 0.025793 0.019331 0.105930;
                 0.029432 0.021503 0.114621;
                 0.033385 0.023702 0.123397;
                 0.037668 0.025921 0.132232;
                 0.042253 0.028139 0.141141;
                 0.046915 0.030324 0.150164;
                 0.051644 0.032474 0.159254;
                 0.056449 0.034569 0.168414;
                 0.061340 0.036590 0.177642;
                 0.066331 0.038504 0.186962;
                 0.071429 0.040294 0.196354;
                 0.076637 0.041905 0.205799;
                 0.081962 0.043328 0.215289;
                 0.087411 0.044556 0.224813;
                 0.092990 0.045583 0.234358;
                 0.098702 0.046402 0.243904;
                 0.104551 0.047008 0.253430;
                 0.110536 0.047399 0.262912;
                 0.116656 0.047574 0.272321;
                 0.122908 0.047536 0.281624;
                 0.129285 0.047293 0.290788;
                 0.135778 0.046856 0.299776;
                 0.142378 0.046242 0.308553;
                 0.149073 0.045468 0.317085;
                 0.155850 0.044559 0.325338;
                 0.162689 0.043554 0.333277;
                 0.169575 0.042489 0.340874;
                 0.176493 0.041402 0.348111;
                 0.183429 0.040329 0.354971;
                 0.190367 0.039309 0.361447;
                 0.197297 0.038400 0.367535;
                 0.204209 0.037632 0.373238;
                 0.211095 0.037030 0.378563;
                 0.217949 0.036615 0.383522;
                 0.224763 0.036405 0.388129;
                 0.231538 0.036405 0.392400;
                 0.238273 0.036621 0.396353;
                 0.244967 0.037055 0.400007;
                 0.251620 0.037705 0.403378;
                 0.258234 0.038571 0.406485;
                 0.264810 0.039647 0.409345;
                 0.271347 0.040922 0.411976;
                 0.277850 0.042353 0.414392;
                 0.284321 0.043933 0.416608;
                 0.290763 0.045644 0.418637;
                 0.297178 0.047470 0.420491;
                 0.303568 0.049396 0.422182;
                 0.309935 0.051407 0.423721;
                 0.316282 0.053490 0.425116;
                 0.322610 0.055634 0.426377;
                 0.328921 0.057827 0.427511;
                 0.335217 0.060060 0.428524;
                 0.341500 0.062325 0.429425;
                 0.347771 0.064616 0.430217;
                 0.354032 0.066925 0.430906;
                 0.360284 0.069247 0.431497;
                 0.366529 0.071579 0.431994;
                 0.372768 0.073915 0.432400;
                 0.379001 0.076253 0.432719;
                 0.385228 0.078591 0.432955;
                 0.391453 0.080927 0.433109;
                 0.397674 0.083257 0.433183;
                 0.403894 0.085580 0.433179;
                 0.410113 0.087896 0.433098;
                 0.416331 0.090203 0.432943;
                 0.422549 0.092501 0.432714;
                 0.428768 0.094790 0.432412;
                 0.434987 0.097069 0.432039;
                 0.441207 0.099338 0.431594;
                 0.447428 0.101597 0.431080;
                 0.453651 0.103848 0.430498;
                 0.459875 0.106089 0.429846;
                 0.466100 0.108322 0.429125;
                 0.472328 0.110547 0.428334;
                 0.478558 0.112764 0.427475;
                 0.484789 0.114974 0.426548;
                 0.491022 0.117179 0.425552;
                 0.497257 0.119379 0.424488;
                 0.503493 0.121575 0.423356;
                 0.509730 0.123769 0.422156;
                 0.515967 0.125960 0.420887;
                 0.522206 0.128150 0.419549;
                 0.528444 0.130341 0.418142;
                 0.534683 0.132534 0.416667;
                 0.540920 0.134729 0.415123;
                 0.547157 0.136929 0.413511;
                 0.553392 0.139134 0.411829;
                 0.559624 0.141346 0.410078;
                 0.565854 0.143567 0.408258;
                 0.572081 0.145797 0.406369;
                 0.578304 0.148039 0.404411;
                 0.584521 0.150294 0.402385;
                 0.590734 0.152563 0.400290;
                 0.596940 0.154848 0.398125;
                 0.603139 0.157151 0.395891;
                 0.609330 0.159474 0.393589;
                 0.615513 0.161817 0.391219;
                 0.621685 0.164184 0.388781;
                 0.627847 0.166575 0.386276;
                 0.633998 0.168992 0.383704;
                 0.640135 0.171438 0.381065;
                 0.646260 0.173914 0.378359;
                 0.652369 0.176421 0.375586;
                 0.658463 0.178962 0.372748;
                 0.664540 0.181539 0.369846;
                 0.670599 0.184153 0.366879;
                 0.676638 0.186807 0.363849;
                 0.682656 0.189501 0.360757;
                 0.688653 0.192239 0.357603;
                 0.694627 0.195021 0.354388;
                 0.700576 0.197851 0.351113;
                 0.706500 0.200728 0.347777;
                 0.712396 0.203656 0.344383;
                 0.718264 0.206636 0.340931;
                 0.724103 0.209670 0.337424;
                 0.729909 0.212759 0.333861;
                 0.735683 0.215906 0.330245;
                 0.741423 0.219112 0.326576;
                 0.747127 0.222378 0.322856;
                 0.752794 0.225706 0.319085;
                 0.758422 0.229097 0.315266;
                 0.764010 0.232554 0.311399;
                 0.769556 0.236077 0.307485;
                 0.775059 0.239667 0.303526;
                 0.780517 0.243327 0.299523;
                 0.785929 0.247056 0.295477;
                 0.791293 0.250856 0.291390;
                 0.796607 0.254728 0.287264;
                 0.801871 0.258674 0.283099;
                 0.807082 0.262692 0.278898;
                 0.812239 0.266786 0.274661;
                 0.817341 0.270954 0.270390;
                 0.822386 0.275197 0.266085;
                 0.827372 0.279517 0.261750;
                 0.832299 0.283913 0.257383;
                 0.837165 0.288385 0.252988;
                 0.841969 0.292933 0.248564;
                 0.846709 0.297559 0.244113;
                 0.851384 0.302260 0.239636;
                 0.855992 0.307038 0.235133;
                 0.860533 0.311892 0.230606;
                 0.865006 0.316822 0.226055;
                 0.869409 0.321827 0.221482;
                 0.873741 0.326906 0.216886;
                 0.878001 0.332060 0.212268;
                 0.882188 0.337287 0.207628;
                 0.886302 0.342586 0.202968;
                 0.890341 0.347957 0.198286;
                 0.894305 0.353399 0.193584;
                 0.898192 0.358911 0.188860;
                 0.902003 0.364492 0.184116;
                 0.905735 0.370140 0.179350;
                 0.909390 0.375856 0.174563;
                 0.912966 0.381636 0.169755;
                 0.916462 0.387481 0.164924;
                 0.919879 0.393389 0.160070;
                 0.923215 0.399359 0.155193;
                 0.926470 0.405389 0.150292;
                 0.929644 0.411479 0.145367;
                 0.932737 0.417627 0.140417;
                 0.935747 0.423831 0.135440;
                 0.938675 0.430091 0.130438;
                 0.941521 0.436405 0.125409;
                 0.944285 0.442772 0.120354;
                 0.946965 0.449191 0.115272;
                 0.949562 0.455660 0.110164;
                 0.952075 0.462178 0.105031;
                 0.954506 0.468744 0.099874;
                 0.956852 0.475356 0.094695;
                 0.959114 0.482014 0.089499;
                 0.961293 0.488716 0.084289;
                 0.963387 0.495462 0.079073;
                 0.965397 0.502249 0.073859;
                 0.967322 0.509078 0.068659;
                 0.969163 0.515946 0.063488;
                 0.970919 0.522853 0.058367;
                 0.972590 0.529798 0.053324;
                 0.974176 0.536780 0.048392;
                 0.975677 0.543798 0.043618;
                 0.977092 0.550850 0.039050;
                 0.978422 0.557937 0.034931;
                 0.979666 0.565057 0.031409;
                 0.980824 0.572209 0.028508;
                 0.981895 0.579392 0.026250;
                 0.982881 0.586606 0.024661;
                 0.983779 0.593849 0.023770;
                 0.984591 0.601122 0.023606;
                 0.985315 0.608422 0.024202;
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