Unsupervised discovery of behaviorally relevant brain states in rats playing hide-and-seek

Bence Bagi e8c9e919a7 Missing comma in reference 1 year ago
LICENSE 5cddbf71a1 Change license 1 year ago
README.md 3709e57b70 Add data description with ER diagram to readme 1 year ago
database.db 899ebe46fc Upload database.db 1 year ago
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hide_and_seek_ER.png ae7ee085ff Upload ER diagram 1 year ago
observing.db df82c0b943 Upload observing.db 1 year ago

README.md

Unsupervised discovery of behaviorally relevant brain states in rats playing hide-and-seek

This repository contains the SQLite files used for the analysis in Bagi et al. (2022):

  • database.db contains the data from the hide-and-seek experiments performed by Reinhold et al. (2019)
  • observing.db contains the data from the observing experiments performed by Concha-Miranda et al. (2020).

Both database files have the following structure:

Code for reading and analyzing the data can be found on GitHub

datacite.yml
Title Unsupervised discovery of behaviorally relevant brain states in rats playing hide-and-seek
Authors Bagi,Bence;Bernstein Center for Computational Neuroscience, Humboldt-Universität zu Berlin, Philippstr. 13, Haus 6, 10115 Berlin, Germany;ORCID:0000-0003-0849-7480
Brecht,Michael;Bernstein Center for Computational Neuroscience, Humboldt-Universität zu Berlin, Philippstr. 13, Haus 6, 10115 Berlin, Germany;ORCID:0000-0002-5387-0953
Sanguinetti-Scheck,Juan Ignacio;Bernstein Center for Computational Neuroscience, Humboldt-Universität zu Berlin, Philippstr. 13, Haus 6, 10115 Berlin, Germany;ORCID:0000-0002-2511-208X
Description Data collected for Reinhold et al. (2019, Science), as well as Concha‐Miranda et al. (2020, Eur. J. Neurosci.). Reorganized for further analysis of the neural data in Bagi et al. (2022, Current Biology).
License Creative Commons Attribution 4.0 International Public License (https://creativecommons.org/licenses/by/4.0/)
References Reinhold, A.S., Sanguinetti-Scheck, J.I., Hartmann, K., and Brecht, M. (2019). Behavioral and neural correlates of hide-and-seek in rats. Science 365, 1180–1183. [doi:10.1126/science.aax4705] (IsDescribedBy)
Concha‐Miranda, M., Hartmann, K., Reinhold, A., Brecht, M., and Sanguinetti-Scheck, J.I. (2020). Play, but not observing play, engages rat medial prefrontal cortex. Eur. J. Neurosci. 52, 4127–4138. [doi:10.1111/ejn.14908] (IsDescribedBy)
Bagi, B., Brecht, M., and Sanguinetti-Scheck, J.I. (2022). Unsupervised discovery of behaviorally relevant brain states in rats playing hide-and-seek. Current Biology. (in press) [doi:tba] (IsSupplementTo)
Funding Einsteinstiftung, ESB project ‘Dynamics of electronically coupled neuronal networks”, A-2016-350
European Research Council, ERC synergy grant BrainPlay
German Academic Exchange Service (DAAD)
Human Frontier Science Program Long Term Postdoctoral Fellowship, HFSP Ref. LT000289/2021-L
Keywords Neuroscience
hide-and-seek
Resource Type Dataset