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alessandrofelder 09a9e39909 gin commit from support-XPS-8950		1 year ago
LICENSE	bbbe2705e7 Initial commit	4 years ago
README.md	20925f5f56 Add developmental mouse atlases to readme	2 years ago
admba_3d_e11_5_mouse_16um_v1.0.tar.gz	d9af48825c Add ADMBA	2 years ago
admba_3d_e13_5_mouse_16um_v1.0.tar.gz	4caf80d87d Add ADMBA	2 years ago
admba_3d_e15_5_mouse_16um_v1.0.tar.gz	ea09e0b215 Add ADMBA	2 years ago
admba_3d_e18_5_mouse_16um_v1.0.tar.gz	a0afe3a538 Add ADMBA	2 years ago
admba_3d_p14_mouse_16.752um_v1.0.tar.gz	b43a8fb872 Add ADMBA	2 years ago
admba_3d_p28_mouse_16.752um_v1.0.tar.gz	bfe2f0afae Add ADMBA	2 years ago
admba_3d_p4_mouse_16.752um_v1.0.tar.gz	3c0b8bffc6 Add ADMBA	2 years ago
admba_3d_p56_mouse_25um_v1.0.tar.gz	4d17a19c23 Add ADMBA	2 years ago
allen_cord_20um_v1.0.tar.gz	b0631317b5 Add cord atlas data	3 years ago
allen_human_500um_v0.1.tar.gz	60658860f7 Upload files to ''	4 years ago
allen_mouse_100um_v1.0.tar.gz	79cb1c496d Updated: /Users/luigipetrucco/bg_auto/tempdir/mpin_zfish_1um_v1.0.tar.gz.name, /Users/luigipetrucco/bg_auto/tempdir/allen_mouse_100um_v1.0.tar.gz.name, /Users/luigipetrucco/bg_auto/tempdir/example_mouse_100um_v1.0.tar.gz.name,	4 years ago
allen_mouse_100um_v1.1.tar.gz	5e7eba7936 Updated: allen_mouse_10um_v1.1.tar, allen_mouse_25um_v1.1.tar, allen_mouse_100um_v1.1.tar, example_mouse_100um_v1.1.tar,	4 years ago
allen_mouse_100um_v1.2.tar.gz	3be5dae7a3 Updated: allen_mouse_10um_v1.2.tar, allen_mouse_25um_v1.2.tar, allen_mouse_50um_v1.2.tar, allen_mouse_100um_v1.2.tar, example_mouse_100um_v1.2.tar,	4 years ago
allen_mouse_10um_v0.3.tar.gz	8b6b9768f7 upload renamed allen mouse atlases	4 years ago
allen_mouse_10um_v1.1.tar.gz	5e7eba7936 Updated: allen_mouse_10um_v1.1.tar, allen_mouse_25um_v1.1.tar, allen_mouse_100um_v1.1.tar, example_mouse_100um_v1.1.tar,	4 years ago
allen_mouse_10um_v1.2.tar.gz	3be5dae7a3 Updated: allen_mouse_10um_v1.2.tar, allen_mouse_25um_v1.2.tar, allen_mouse_50um_v1.2.tar, allen_mouse_100um_v1.2.tar, example_mouse_100um_v1.2.tar,	4 years ago
allen_mouse_25um_v0.3.tar.gz	8b6b9768f7 upload renamed allen mouse atlases	4 years ago
allen_mouse_25um_v1.1.tar.gz	5e7eba7936 Updated: allen_mouse_10um_v1.1.tar, allen_mouse_25um_v1.1.tar, allen_mouse_100um_v1.1.tar, example_mouse_100um_v1.1.tar,	4 years ago
allen_mouse_25um_v1.2.tar.gz	3be5dae7a3 Updated: allen_mouse_10um_v1.2.tar, allen_mouse_25um_v1.2.tar, allen_mouse_50um_v1.2.tar, allen_mouse_100um_v1.2.tar, example_mouse_100um_v1.2.tar,	4 years ago
allen_mouse_50um_v0.3.tar.gz	8b6b9768f7 upload renamed allen mouse atlases	4 years ago
allen_mouse_50um_v1.2.tar.gz	3be5dae7a3 Updated: allen_mouse_10um_v1.2.tar, allen_mouse_25um_v1.2.tar, allen_mouse_50um_v1.2.tar, allen_mouse_100um_v1.2.tar, example_mouse_100um_v1.2.tar,	4 years ago
azba_zfish_4um_v1.0.tar.gz	0cb83051e3 Add AZBA	3 years ago
azba_zfish_4um_v1.1.tar.gz	aea164ecce Upload files to ''	2 years ago
example_mouse_100um_v1.0.tar.gz	79cb1c496d Updated: /Users/luigipetrucco/bg_auto/tempdir/mpin_zfish_1um_v1.0.tar.gz.name, /Users/luigipetrucco/bg_auto/tempdir/allen_mouse_100um_v1.0.tar.gz.name, /Users/luigipetrucco/bg_auto/tempdir/example_mouse_100um_v1.0.tar.gz.name,	4 years ago
example_mouse_100um_v1.1.tar.gz	5e7eba7936 Updated: allen_mouse_10um_v1.1.tar, allen_mouse_25um_v1.1.tar, allen_mouse_100um_v1.1.tar, example_mouse_100um_v1.1.tar,	4 years ago
example_mouse_100um_v1.2.tar.gz	3be5dae7a3 Updated: allen_mouse_10um_v1.2.tar, allen_mouse_25um_v1.2.tar, allen_mouse_50um_v1.2.tar, allen_mouse_100um_v1.2.tar, example_mouse_100um_v1.2.tar,	4 years ago
kim_dev_mouse_idisco_10um_v1.1.tar.gz	23de7549c4 Add kim developmental atlases (standard template, idisco and 5 MRI)	1 year ago
kim_dev_mouse_mri_a0_10um_v1.1.tar.gz	23de7549c4 Add kim developmental atlases (standard template, idisco and 5 MRI)	1 year ago
kim_dev_mouse_mri_adc_10um_v1.1.tar.gz	23de7549c4 Add kim developmental atlases (standard template, idisco and 5 MRI)	1 year ago
kim_dev_mouse_mri_dwi_10um_v1.1.tar.gz	23de7549c4 Add kim developmental atlases (standard template, idisco and 5 MRI)	1 year ago
kim_dev_mouse_mri_fa_10um_v1.1.tar.gz	23de7549c4 Add kim developmental atlases (standard template, idisco and 5 MRI)	1 year ago
kim_dev_mouse_mri_mtr_10um_v1.1.tar.gz	f1aad8bbb1 Add kim developmental magnetric transfer ratio (mtr) atlas	1 year ago
kim_dev_mouse_mri_t2_10um_v1.1.tar.gz	23de7549c4 Add kim developmental atlases (standard template, idisco and 5 MRI)	1 year ago
kim_dev_mouse_stp_10um_v1.1.tar.gz	6c6f307ea3 Update kim developmental atlases standard template to lower case	1 year ago
kim_mouse_100um_v1.0.tar.gz	f995007276 add kim atlas resolutions	4 years ago
kim_mouse_10um_v1.0.tar.gz	97c098b9ab add 10um kim atlas resolution	4 years ago
kim_mouse_25um_v1.0.tar.gz	b409cb7307 Add new Kim atlas	4 years ago
kim_mouse_50um_v1.0.tar.gz	f995007276 add kim atlas resolutions	4 years ago
kim_unified_25um_v0.1.tar.gz	5b0dc29e2c Upload files to ''	4 years ago
last_versions.conf	09a9e39909 gin commit from support-XPS-8950	1 year ago
mpin_zfish_1um_v1.0.tar.gz	79cb1c496d Updated: /Users/luigipetrucco/bg_auto/tempdir/mpin_zfish_1um_v1.0.tar.gz.name, /Users/luigipetrucco/bg_auto/tempdir/allen_mouse_100um_v1.0.tar.gz.name, /Users/luigipetrucco/bg_auto/tempdir/example_mouse_100um_v1.0.tar.gz.name,	4 years ago
osten_mouse_100um_v1.1.tar.gz	7c15dc3bf0 update osten atlases	3 years ago
osten_mouse_10um_v1.1.tar.gz	7c15dc3bf0 update osten atlases	3 years ago
osten_mouse_25um_v1.1.tar.gz	7c15dc3bf0 update osten atlases	3 years ago
osten_mouse_50um_v1.1.tar.gz	7c15dc3bf0 update osten atlases	3 years ago
perens_lsfm_mouse_20um_v1.0.tar.gz	1a3af12ae7 Add perens LSFM atlas	2 years ago
princeton_mouse_20um_v1.0.tar.gz	3af8fd42e1 Add princeton mouse atlas	2 years ago
whs_sd_rat_39um_v1.0.tar.gz	2f8443ddd5 Add WHS at atlas	3 years ago
whs_sd_rat_39um_v1.1.tar.gz	09a9e39909 gin commit from support-XPS-8950	1 year ago

Brainglobe atlases

Repo containing the atlases formatted to be used within Brainglobe.

List of available atlases:

Allen Mouse Brain Atlas at 10, 25, 50 and 100 micron resolutions
Allen Human Brain Atlas at 100 micron resolution
Max Planck Zebrafish Brain Atlas at 1 micron resolution
Enhanced and Unified Mouse Brain Atlas at 10, 25, 50 and 100 micron resolutions
Smoothed version of the Kim et al. mouse reference atlas at 10, 25, 50 and 100 micron resolutions
Gubra's LSFM mouse brain atlas at 20 micron resolution
3D version of the Allen mouse spinal cord atlas at 20 x 10 x 10 micron resolution
AZBA: A 3D Adult Zebrafish Brain Atlas at 4 micron resolution
Waxholm Space atlas of the Sprague Dawley rat brain at 39 micron resolution
3D Edge-Aware Refined Atlases Derived from the Allen Developing Mouse Brain Atlases (E13, E15, E18, P4, P14, P28 & P56)

README.md

Brainglobe atlases