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Ajayrama Kumaraswamy 62da18c9ba split conda files into linux and mac+win to add glibc dependency		1 年之前
Notebooks	8a84333ea7 moved code to github	2 年之前
VIEWtemplates	422cb63d73 localCTV: added sample file to VIEWtemplates	2 年之前
log2list_examples	77ae1fbd77 added better help to beginning of create_measurement_list_lif.py	1 年之前
old_conda_files	bece144f7c setup install ILTIS 1.5; tests passing on Linux for conda envs 3.9 and 3.10	1 年之前
synthetic_data	6eba26b8e9 Update to TOC in VIEW_Tutorial.pdf	1 年之前
tests	61f1ee0ddc changes to avoid future warning from pandas	1 年之前
utility_scripts	b3c5db08fc minor correction in setup_testing.py	1 年之前
view	b1598faa31 added LE_LoadExp 665,667, 676 to direct load; minor bug fix	1 年之前
.gitignore	8a84333ea7 moved code to github	2 年之前
LICENSE-BSD-3-CLAUSE	0df9ed2d37 updated README; changes license to BSD-3-CLAUSE	2 年之前
README.md	7b52e13ef6 Readme for Tutorial changes	1 年之前
conda_py310_dev_linux.yml	62da18c9ba split conda files into linux and mac+win to add glibc dependency	1 年之前
conda_py310_dev_mac_win.yml	62da18c9ba split conda files into linux and mac+win to add glibc dependency	1 年之前
conda_py310_linux.yml	62da18c9ba split conda files into linux and mac+win to add glibc dependency	1 年之前
conda_py310_mac_win.yml	62da18c9ba split conda files into linux and mac+win to add glibc dependency	1 年之前
setup.py	bece144f7c setup install ILTIS 1.5; tests passing on Linux for conda envs 3.9 and 3.10	1 年之前

Welcome to the repository containing the python implementation of PyView

PyView is a general purpose tool to analyze calcium imaging data of responses to sensory stimuli. Its philosophy is two-dimensional.

License

BSD 3 Clause, see file LICENSE-BSD-3-CLAUSE

Installation and Usage

Please consult the wiki

Issues

If you find bugs, have questions about its usage, or have ideas for new features, please check the Issues tab for related Issues and if you are convinced, create a new Issue. For bugs and errors, please paste the error you have encountered and clearly state the steps to reproduce the error. Thank You!

Contributing

Please consult this page on the wiki for a Developer Guide. Pull requests corresponding to well documented issues in this repository are welcome!

Tutorial

Copy the folder "synthetic_data" into a place of your system where you keep data. (If you installed as a developer, the folder is in the program tree. If you installed as a simple user, you should download the folder from the github location). Open the file VIEW_Tutorial.pdf. This will guide you through a hands-on quick tour using a synthetic data set, showing you how to use VIEW, ILTIS and off-line analysis.

Testing

TODO

README.md