Calcium imaging raw data from hippocampal CA1 during wakefulness, sleep and under various general anesthetics

Andrey Formozov 717e53271b Update 'README.md'		2 years ago
Anesthesia	6a07176db7 gin commit from andrey-UX510UXK	3 years ago
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Sleep_pupillometry	af6c599771 Delete 'Sleep_pupillometry/raw_2PM/8235_1st_006 20-12-08 22-31-21-converted_ds.mp4'	2 years ago
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Calcium_imaging_CA1_raw

A large-scale, annotated collection of 2-photon raw calcium imaging data (*.tif format) in CA1 of the murine hippocampus under three distinct anesthetics (Isoflurane, Keta/Xyl and MMF), during natural sleep, and wakefulness.

This repository contains raw calcium imaging recordings. Processed recordings are available in another repository.

Awake	Isoflurane	Keta/Xyl	MMF

03/04/2022 The archived copy of the dataset contains an erroneously included file "Sleep_pupillometry/raw_2PM/8235_1st_006 20-12-08 22-31-21-converted_ds.mp4", which is not part of the dataset described in the Data Descriptor article. This file was removed from the current version of the dataset.

datacite.yml
Title	Calcium imaging of hippocampal activity under anesthesia and natural sleep in mice
Authors	Formozov,Andrey;Research Group Synaptic Wiring and Information Processing, Center for Molecular Neurobiology Hamburg, University Medical Center Hamburg-Eppendorf, 20251 Hamburg, Germany;ORCID:0000-0001-8935-8612 Chini,Mattia;Institute of Developmental Neurophysiology, Center for Molecular Neurobiology Hamburg, University Medical Center Hamburg-Eppendorf, 20251 Hamburg, Germany;ORCID:0000-0002-5782-9720 Dieter,Alexander;Research Group Synaptic Wiring and Information Processing, Center for Molecular Neurobiology Hamburg, University Medical Center Hamburg-Eppendorf, 20251 Hamburg, Germany;ORCID:0000-0002-9154-4833 Yang,Wei;Research Group Synaptic Wiring and Information Processing, Center for Molecular Neurobiology Hamburg, University Medical Center Hamburg-Eppendorf, 20251 Hamburg, Germany;ORCID:0000-0002-1052-8808 Pöpplau,Jastyn A.;Institute of Developmental Neurophysiology, Center for Molecular Neurobiology Hamburg, University Medical Center Hamburg-Eppendorf, 20251 Hamburg, Germany;ORCID:0000-0002-4350-3164 Hanganu-Opatz,Ileana L.;Institute of Developmental Neurophysiology, Center for Molecular Neurobiology Hamburg, University Medical Center Hamburg-Eppendorf, 20251 Hamburg, Germany;ORCID:0000-0002-4787-1765 Wiegert,J. Simon;Research Group Synaptic Wiring and Information Processing, Center for Molecular Neurobiology Hamburg, University Medical Center Hamburg-Eppendorf, 20251 Hamburg, Germany;ORCID:0000-0003-0893-9349
Description	Large-scale, annotated collection of 2-photon calcium imaging data in CA1 of the murine hippocampus under three distinct anesthetics (Isoflurane, Keta/Xyl and MMF), during natural sleep, and during wakefulness.
License	Creative Commons CC0 1.0 Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/)
References	Formozov, A., Chini, M., Dieter, A. et al. Calcium Imaging and Electrophysiology of hippocampal Activity under Anesthesia and natural Sleep in Mice. Sci Data 9, 113 (2022). https://doi.org/10.1038/s41597-022-01244-2 [https://doi.org/10.1038/s41597-022-01244-2] (IsDescribedBy) Yang, W., Chini, M. et al. Anesthetics fragment hippocampal network activity, alter spine dynamics, and affect memory consolidation. PLoS biology, 19(4), e3001146. [doi:10.1371/journal.pbio.3001146] (IsSupplementTo) Formozov A., Chini M., Dieter A., Yang W., Pöpplau J.A., Hanganu-Opatz I.L., Wiegert J.S. (2022) Calcium imaging and electrophysiology of hippocampal activity under anesthesia and natural sleep in mice. G-Node. https://doi.org/10.12751/g-node.lkx6kk [doi:10.12751/g-node.lkx6k] (IsSourceOf)
Funding	German Research Council, SFB936/B8 German Research Council, SFB936/B5 European Research Council, ERC-2016-StG-714762 European Research Council, ERC-2015-CoG-681577 Alexander von Humboldt Foundation, Research Fellowship EU-project euSNN, MSCA-ITN-H2020-860563 Landesforschungsförderung Hamburg, LFF76 and LFF73 Chinese Scholarship Council, CSC 201606210129
Keywords	Neuroscience Anesthesia Anaesthesia Sleep Recovery Hippocampus CA1 Pyramidal neurons Calcium imaging data Pupillometry
Resource Type	Dataset

README.md

Calcium_imaging_CA1_raw