OmerYuval/Neuronalyzer_SI

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Omer Yuval 95a2ccb392 Added the SI text. Added the parameters table as a separate file.		3 rokov pred
Locomotion_Recordings	653ae0d416 File names changed according to the journal's guidelines.	3 rokov pred
PVD_Images	653ae0d416 File names changed according to the journal's guidelines.	3 rokov pred
Project_Files	653ae0d416 File names changed according to the journal's guidelines.	3 rokov pred
Table_Data	95a2ccb392 Added the SI text. Added the parameters table as a separate file.	3 rokov pred
Text	95a2ccb392 Added the SI text. Added the parameters table as a separate file.	3 rokov pred
LICENSE	52c57e4455 Initial commit	3 rokov pred
README.md	867b38230f Update 'README.md'	3 rokov pred
datacite.yml	653ae0d416 File names changed according to the journal's guidelines.	3 rokov pred

Supplementary data for "Neuron tracing and quantitative analyses of dendritic architecture reveal symmetrical three-way-junctions and phenotypes of git-1 in C. elegans" (https://doi.org/10.1101/2020.12.31.424915).

This repository contains raw image and video data, and data to reproduce the figures in the above paper. Image data contains raw PVD images and video data contains locomotion recordings used in figure 7. MATLAB files contain raw, processed and meta data, and can be used to reproduce all the results in the paper. These files can be loaded into the interactive UI of the Neuronalyzer software (https://github.com/Omer1Yuval1/Neuronalyzer).

datacite.yml
Title	Neuron tracing and quantitative analyses of dendritic architecture reveal symmetrical three-way-junctions and phenotypes of git-1 in C. elegans
Authors	Yuval,Omer;;ORCID:0000-0002-4994-9677 Iosilevskii,Yael Meledin,Anna Podbilewicz,Benjamin Shemesh,Tom
Description	supporting data including raw PVD images, locomotion recordings, table data and MATLAB files.
License	Creative Commons CC0 1.0 Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/)
References	Yuval O, Iosilevskii Y, Meledin A, Podbilewicz B, Shemesh T (2021) Neuron tracing and quantitative analyses of dendritic architecture reveal symmetrical three-way-junctions and phenotypes of git-1 in C. elegans. bioRxiv. https://doi.org/10.1101/2020.12.31.424915 [doi:10.1101/2020.12.31.424915] (IsSupplementTo)
Funding
Keywords	neuronal structure analysis dendritic arborization convolutional neural network PVD neuron fitting algorithm three-way junctions neuron tracing
Resource Type	Dataset

README.md