OmerYuval/Neuronalyzer_SI

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Omer Yuval 95a2ccb392 Added the SI text. Added the parameters table as a separate file.		2 лет назад
Locomotion_Recordings	653ae0d416 File names changed according to the journal's guidelines.	2 лет назад
PVD_Images	653ae0d416 File names changed according to the journal's guidelines.	2 лет назад
Project_Files	653ae0d416 File names changed according to the journal's guidelines.	2 лет назад
Table_Data	95a2ccb392 Added the SI text. Added the parameters table as a separate file.	2 лет назад
Text	95a2ccb392 Added the SI text. Added the parameters table as a separate file.	2 лет назад
LICENSE	52c57e4455 Initial commit	2 лет назад
README.md	867b38230f Update 'README.md'	2 лет назад
datacite.yml	653ae0d416 File names changed according to the journal's guidelines.	2 лет назад

Supplementary data for "Neuron tracing and quantitative analyses of dendritic architecture reveal symmetrical three-way-junctions and phenotypes of git-1 in C. elegans" (https://doi.org/10.1101/2020.12.31.424915).

This repository contains raw image and video data, and data to reproduce the figures in the above paper. Image data contains raw PVD images and video data contains locomotion recordings used in figure 7. MATLAB files contain raw, processed and meta data, and can be used to reproduce all the results in the paper. These files can be loaded into the interactive UI of the Neuronalyzer software (https://github.com/Omer1Yuval1/Neuronalyzer).

datacite.yml
Title	Neuron tracing and quantitative analyses of dendritic architecture reveal symmetrical three-way-junctions and phenotypes of git-1 in C. elegans
Authors	Yuval,Omer;;ORCID:0000-0002-4994-9677 Iosilevskii,Yael Meledin,Anna Podbilewicz,Benjamin Shemesh,Tom
Description	supporting data including raw PVD images, locomotion recordings, table data and MATLAB files.
License	Creative Commons CC0 1.0 Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/)
References	Yuval O, Iosilevskii Y, Meledin A, Podbilewicz B, Shemesh T (2021) Neuron tracing and quantitative analyses of dendritic architecture reveal symmetrical three-way-junctions and phenotypes of git-1 in C. elegans. bioRxiv. https://doi.org/10.1101/2020.12.31.424915 [doi:10.1101/2020.12.31.424915] (IsSupplementTo)
Funding
Keywords	neuronal structure analysis dendritic arborization convolutional neural network PVD neuron fitting algorithm three-way junctions neuron tracing
Resource Type	Dataset

README.md