#101 Add new BioCAM file format

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opened 1 year ago by BaptisteGrimaud · 8 comments

Hi,

As discussed here, 3Brain is switching to a newer architecture for their .brw file format, namely for compatibility with their multiwell MEAs.

This file was recorded on a BioCAM DUPLEX using Brainwave 5.

Hi, As discussed [here](https://github.com/NeuralEnsemble/python-neo/issues/1156), 3Brain is switching to a newer architecture for their .brw file format, namely for compatibility with their multiwell MEAs. This file was recorded on a BioCAM DUPLEX using Brainwave 5.
sprenger commented 1 year ago
Owner

Hi @baptistegrimaud! Which file are you referring to? Could you open a PR to add the file directly? For instructions on how to contribute the Readme. I already added you as a collaborator.

Hi @baptistegrimaud! Which file are you referring to? Could you open a PR to add the file directly? For instructions on how to contribute the [Readme](https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/src/master/README.md). I already added you as a collaborator.
Baptiste Grimaud commented 1 year ago
Collaborator

Hi,

Thanks for the prompt reply !

Here's the PR : https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/pulls/102

I couldn't upload beforehand due to insufficient rights.

Hi, Thanks for the prompt reply ! Here's the PR : https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/pulls/102 I couldn't upload beforehand due to insufficient rights.
sprenger commented 1 year ago
Owner

Closed via #102

Closed via #102
Baptiste Grimaud commented 1 year ago
Collaborator

Briefly reopening this to share the official documentation from 3Brain on this specific file format : https://filesender.renater.fr/?s=download&token=3c48d477-baf4-41e0-b855-4a5a62480de3

Briefly reopening this to share the official documentation from 3Brain on this specific file format : https://filesender.renater.fr/?s=download&token=3c48d477-baf4-41e0-b855-4a5a62480de3
sprenger commented 1 year ago
Owner

Thanks for sharing the documentation. Do you know if this is also hosted by 3Brain in a persistent location? Then we could add the link directly in the Readme describing the test files.

Thanks for sharing the documentation. Do you know if this is also hosted by 3Brain in a persistent location? Then we could add the link directly in the Readme describing the test files.
Baptiste Grimaud commented 1 year ago
Collaborator

I checked on their website and only the documentation for the older file format is available. I got this document directly from them and they gave me permission to share it, but apparently they haven't uploaded it anywhere permanent yet.

I also tried to upload it as an attachment to a comment here but PDFs aren't supported.

I checked on their website and only the documentation for the older file format is available. I got this document directly from them and they gave me permission to share it, but apparently they haven't uploaded it anywhere permanent yet. I also tried to upload it as an attachment to a comment here but PDFs aren't supported.
sprenger commented 1 year ago
Owner

In that case how about adding in to the test data files directly? Otherwise since there's no persistent copy of it yet this document will just vanish again at some point. @baptistegrimaud Could you start another PR for this?

In that case how about adding in to the test data files directly? Otherwise since there's no persistent copy of it yet this document will just vanish again at some point. @baptistegrimaud Could you start another PR for this?
Baptiste Grimaud commented 1 year ago
Collaborator

Submitted !

Submitted !
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