#101 Add new BioCAM file format

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öppnade 1 år sedan av BaptisteGrimaud · 8 kommentarer

Hi,

As discussed here, 3Brain is switching to a newer architecture for their .brw file format, namely for compatibility with their multiwell MEAs.

This file was recorded on a BioCAM DUPLEX using Brainwave 5.

Hi, As discussed [here](https://github.com/NeuralEnsemble/python-neo/issues/1156), 3Brain is switching to a newer architecture for their .brw file format, namely for compatibility with their multiwell MEAs. This file was recorded on a BioCAM DUPLEX using Brainwave 5.
sprenger kommenterad 1 år sedan
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Hi @baptistegrimaud! Which file are you referring to? Could you open a PR to add the file directly? For instructions on how to contribute the Readme. I already added you as a collaborator.

Hi @baptistegrimaud! Which file are you referring to? Could you open a PR to add the file directly? For instructions on how to contribute the [Readme](https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/src/master/README.md). I already added you as a collaborator.
Baptiste Grimaud kommenterad 1 år sedan
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Hi,

Thanks for the prompt reply !

Here's the PR : https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/pulls/102

I couldn't upload beforehand due to insufficient rights.

Hi, Thanks for the prompt reply ! Here's the PR : https://gin.g-node.org/NeuralEnsemble/ephy_testing_data/pulls/102 I couldn't upload beforehand due to insufficient rights.
sprenger kommenterad 1 år sedan
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Closed via #102

Closed via #102
Baptiste Grimaud kommenterad 1 år sedan
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Briefly reopening this to share the official documentation from 3Brain on this specific file format : https://filesender.renater.fr/?s=download&token=3c48d477-baf4-41e0-b855-4a5a62480de3

Briefly reopening this to share the official documentation from 3Brain on this specific file format : https://filesender.renater.fr/?s=download&token=3c48d477-baf4-41e0-b855-4a5a62480de3
sprenger kommenterad 1 år sedan
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Thanks for sharing the documentation. Do you know if this is also hosted by 3Brain in a persistent location? Then we could add the link directly in the Readme describing the test files.

Thanks for sharing the documentation. Do you know if this is also hosted by 3Brain in a persistent location? Then we could add the link directly in the Readme describing the test files.
Baptiste Grimaud kommenterad 1 år sedan
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I checked on their website and only the documentation for the older file format is available. I got this document directly from them and they gave me permission to share it, but apparently they haven't uploaded it anywhere permanent yet.

I also tried to upload it as an attachment to a comment here but PDFs aren't supported.

I checked on their website and only the documentation for the older file format is available. I got this document directly from them and they gave me permission to share it, but apparently they haven't uploaded it anywhere permanent yet. I also tried to upload it as an attachment to a comment here but PDFs aren't supported.
sprenger kommenterad 1 år sedan
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In that case how about adding in to the test data files directly? Otherwise since there's no persistent copy of it yet this document will just vanish again at some point. @baptistegrimaud Could you start another PR for this?

In that case how about adding in to the test data files directly? Otherwise since there's no persistent copy of it yet this document will just vanish again at some point. @baptistegrimaud Could you start another PR for this?
Baptiste Grimaud kommenterad 1 år sedan
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Submitted !

Submitted !
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