 Paul Pfeiffer
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a2034c83a7
prepared notebook for using model fitting with brian2
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 moritz
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c9779cf3e6
Aaaaand some more plots
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moritz
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6a4ee4ffd7
Added more figures and saved results
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moritz
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6a3195ce07
More plots are working. Axonal cloud saved as result, but the solution is somewhat ugly since objects cant be saved.
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moritz
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7d398b5c1a
Tuning curve plot works and head direction indices and firing rates are saved to trajectory hdf5 file
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moritz
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53d5474727
Only added diagnostic prints for single neuron
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Paul Pfeiffer
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5523226003
resolve conflict
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Paul Pfeiffer
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99f3c18c82
Update README.md
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Paul Pfeiffer
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d2ecdf0c51
Added external resources links
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moritz
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746d6cf609
Firing rate still incorrect and thus HDI turns out to be NAN.
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Paul Pfeiffer
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2482e4dbfd
added environment.yml to ensure same python setup
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Paul Pfeiffer
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1da59e8d6a
added filter for circular morphology
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Paul Pfeiffer
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896746d408
iterate over all runs and calculate (dummy) head direction index
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Paul Pfeiffer
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7c86970d26
extract a dictionary of mean firing rates for every neuron and every direction
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Paul Pfeiffer
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c81acb8a0d
saving of spike times via ResultMonitor and exemplary loading
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Paul Pfeiffer
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d36f004e1f
changed input sharpness to angular width and add circular morphologies in exploration
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Paul Pfeiffer
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0ee4bb0df8
changed location of logging and data
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Paul Pfeiffer
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6e26c3f7f7
refactoring including renaming and some function exctraction
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Paul Pfeiffer
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4dff9d2c6d
draft for a pypet implementation of the entropy maximisation experiment
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Paul Pfeiffer
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42ffe3ad3a
removed previous model ansatz from README
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Paul Pfeiffer
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466fe9eaed
moved literature and meeting to wiki
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Paul Pfeiffer
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5318284ad3
moved old code basis to legacy code
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Paul Pfeiffer
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03fbf8794e
removed simulations folder
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Paul Pfeiffer
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476cb5b75c
removing unnecessary files
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Paul Pfeiffer
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a132435856
thoughts about orientation of the ellipsoids
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moritz
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adba34e6ed
Tidied the scripts
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Moritz Drangmeister
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673667ea8c
Immer noch fuers homeoffice
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Moritz Drangmeister
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c862506000
Dieser commit ist nur um mit dem Homeoffice anfangen zu können. Keine Garantie dass alles läuft
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Paul Pfeiffer
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c1e41ac900
thoughts on optimizing ellipsoid orientations to connect clusters of similarly tuned neurons
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Paul Pfeiffer
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01efe67393
added clustered connectivity
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