 moritz
|
2ef71dc0e9
Dataframe used for hdi over correlation length
|
4 years ago |
|
moritz
|
aa339aa633
Merge branch 'master' of itbgit.biologie.hu-berlin.de:compneurophys/subiculum_polar_interneurons
|
4 years ago |
|
moritz
|
3d7564e2ca
I dont know how this works
|
4 years ago |
 Paul Pfeiffer
|
103d7463d9
calculate overlaps of ellipsoids as preliminary step for optimizing overlap via differential evolution
|
4 years ago |
|
Paul Pfeiffer
|
69959d8366
removed todos and renamed functions after code review
|
4 years ago |
|
moritz
|
9839c3100f
Pulling changes from Paul
|
4 years ago |
|
Paul Pfeiffer
|
df9463c35a
simple trace fitting example with a hodgkin huxley model
|
4 years ago |
|
Paul Pfeiffer
|
71d8ad2a6c
fixed missing parameter
|
4 years ago |
|
Paul Pfeiffer
|
679d778180
prepare running the competition gain experiment in a small network
|
4 years ago |
|
Paul Pfeiffer
|
7b7680c270
continued with the fitting tutorial, problems with the nevergrad package
|
4 years ago |
|
Paul Pfeiffer
|
29171a22f0
corrected and simplified combination of parameter exploration dicts
|
4 years ago |
|
moritz
|
5ab00cb724
Some merge seemed to be necessary. I dont know why
|
4 years ago |
|
moritz
|
927eb156c7
Merge branch 'master' of itbgit.biologie.hu-berlin.de:compneurophys/subiculum_polar_interneurons
|
4 years ago |
|
moritz
|
53306c990c
Added non-connected case as benchmark
|
4 years ago |
|
Paul Pfeiffer
|
a2034c83a7
prepared notebook for using model fitting with brian2
|
4 years ago |
|
moritz
|
c9779cf3e6
Aaaaand some more plots
|
4 years ago |
|
moritz
|
6a4ee4ffd7
Added more figures and saved results
|
4 years ago |
|
moritz
|
6a3195ce07
More plots are working. Axonal cloud saved as result, but the solution is somewhat ugly since objects cant be saved.
|
4 years ago |
|
moritz
|
7d398b5c1a
Tuning curve plot works and head direction indices and firing rates are saved to trajectory hdf5 file
|
4 years ago |
|
moritz
|
53d5474727
Only added diagnostic prints for single neuron
|
4 years ago |
|
Paul Pfeiffer
|
5523226003
resolve conflict
|
4 years ago |
|
Paul Pfeiffer
|
99f3c18c82
Update README.md
|
4 years ago |
|
Paul Pfeiffer
|
d2ecdf0c51
Added external resources links
|
4 years ago |
|
moritz
|
746d6cf609
Firing rate still incorrect and thus HDI turns out to be NAN.
|
4 years ago |
|
Paul Pfeiffer
|
2482e4dbfd
added environment.yml to ensure same python setup
|
4 years ago |
|
Paul Pfeiffer
|
1da59e8d6a
added filter for circular morphology
|
4 years ago |
|
Paul Pfeiffer
|
896746d408
iterate over all runs and calculate (dummy) head direction index
|
4 years ago |
|
Paul Pfeiffer
|
7c86970d26
extract a dictionary of mean firing rates for every neuron and every direction
|
4 years ago |
|
Paul Pfeiffer
|
c81acb8a0d
saving of spike times via ResultMonitor and exemplary loading
|
4 years ago |
|
Paul Pfeiffer
|
d36f004e1f
changed input sharpness to angular width and add circular morphologies in exploration
|
4 years ago |
