 Moritz Drangmeister
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25d3a96b79
Deleted prefix in environment.yml as it pointed to Pauls personal folder
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hace 4 años |
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moritz
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2cec11c91f
Greater exploration range of corr_len and seed for the server
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hace 4 años |
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moritz
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2ef71dc0e9
Dataframe used for hdi over correlation length
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hace 4 años |
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moritz
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aa339aa633
Merge branch 'master' of itbgit.biologie.hu-berlin.de:compneurophys/subiculum_polar_interneurons
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hace 4 años |
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moritz
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3d7564e2ca
I dont know how this works
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hace 4 años |
 Paul Pfeiffer
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103d7463d9
calculate overlaps of ellipsoids as preliminary step for optimizing overlap via differential evolution
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hace 4 años |
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Paul Pfeiffer
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69959d8366
removed todos and renamed functions after code review
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hace 4 años |
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moritz
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9839c3100f
Pulling changes from Paul
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hace 4 años |
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Paul Pfeiffer
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df9463c35a
simple trace fitting example with a hodgkin huxley model
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hace 4 años |
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Paul Pfeiffer
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71d8ad2a6c
fixed missing parameter
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hace 4 años |
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Paul Pfeiffer
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679d778180
prepare running the competition gain experiment in a small network
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hace 4 años |
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Paul Pfeiffer
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7b7680c270
continued with the fitting tutorial, problems with the nevergrad package
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hace 4 años |
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Paul Pfeiffer
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29171a22f0
corrected and simplified combination of parameter exploration dicts
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hace 4 años |
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moritz
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5ab00cb724
Some merge seemed to be necessary. I dont know why
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hace 4 años |
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moritz
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927eb156c7
Merge branch 'master' of itbgit.biologie.hu-berlin.de:compneurophys/subiculum_polar_interneurons
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hace 4 años |
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moritz
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53306c990c
Added non-connected case as benchmark
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hace 4 años |
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Paul Pfeiffer
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a2034c83a7
prepared notebook for using model fitting with brian2
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hace 4 años |
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moritz
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c9779cf3e6
Aaaaand some more plots
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hace 4 años |
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moritz
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6a4ee4ffd7
Added more figures and saved results
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hace 4 años |
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moritz
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6a3195ce07
More plots are working. Axonal cloud saved as result, but the solution is somewhat ugly since objects cant be saved.
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hace 4 años |
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moritz
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7d398b5c1a
Tuning curve plot works and head direction indices and firing rates are saved to trajectory hdf5 file
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hace 4 años |
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moritz
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53d5474727
Only added diagnostic prints for single neuron
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hace 4 años |
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Paul Pfeiffer
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5523226003
resolve conflict
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hace 4 años |
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Paul Pfeiffer
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99f3c18c82
Update README.md
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hace 4 años |
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Paul Pfeiffer
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d2ecdf0c51
Added external resources links
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hace 4 años |
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moritz
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746d6cf609
Firing rate still incorrect and thus HDI turns out to be NAN.
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hace 4 años |
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Paul Pfeiffer
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2482e4dbfd
added environment.yml to ensure same python setup
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hace 4 años |
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Paul Pfeiffer
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1da59e8d6a
added filter for circular morphology
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hace 4 años |
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Paul Pfeiffer
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896746d408
iterate over all runs and calculate (dummy) head direction index
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hace 4 años |
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Paul Pfeiffer
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7c86970d26
extract a dictionary of mean firing rates for every neuron and every direction
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hace 4 años |
