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-In this folder an example of the automatic segementation program shown.
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-
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-
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-By running one of the two shell scripts the program starts and segments a
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-brainslice with the segmentation and template files. There are two diffrent
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-scripts, one for MacOS and one for Linux. The only difference between the two is
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-in the nameing of the python instalation. The program only works with python
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-3.7+ and the default macOS instalation of python is 2.7. You are able to check
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-the version of your python instalation by typing 'python --version' in the
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-command line. If the version installed is python 2.7 the python 3 package is
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-often installed as 'python3' instead
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-
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-How to run:
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-In the commandline type in 'bash runner_example.sh'
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-
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-The program will run the program with the sample file and output the correct
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-files in a new directory inside this one named after the file name of the
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-brainslice.
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