We use cookies to ensure you get the best experience on our website
Inicio Explorar Ayuda News
Registro Iniciar sesión
Aswendt_Lab
/
2024_Ruthe_SND
8
0
Fork 0
Archivos Incidencias 0 Pull Requests 0 Wiki
Árbol: c30da9eced
Ramas Etiquetas
2024_Ruthe_SND
/
output
arefks 71bbf47330 corrected bugs hace 4 meses
..
4Presentation 565a9fd388 I added a folder with data from ImageJ hace 4 meses
Final_Quantitative_output 71bbf47330 corrected bugs hace 4 meses
Tract_Density_Map 82d9022a7e cleand up for clarity hace 4 meses
Tract_Density_Map_registered 82d9022a7e cleand up for clarity hace 4 meses
Tract_Mask 82d9022a7e cleand up for clarity hace 4 meses
Tract_Mask_registered 82d9022a7e cleand up for clarity hace 4 meses
del 82d9022a7e cleand up for clarity hace 4 meses
figures b1629b4c36 deleted some files hace 4 meses
C57BL6_mouse.iso_registerd.nii.gz 45782701c4 updated input and output hace 5 meses
README.md a0f2377f45 I updated the READme file for Outputs hace 5 meses
affineTrafo.txt 45782701c4 updated input and output hace 5 meses

README.md

Outputs

  • Nifti_Trakte: Contains all manually drawn masks created with DSI Studio.
  • Nifti_Trakte_registered: Contains the masks registered to our in-house MRI template (MTPL). This registration was performed manually using reg_aladin and reg_resample.
  • affineTrafo.txt: This is the output transformation matrix generated by reg_aladin during the registration of the C57BL6_mouse.iso.nii.gz file to the NP_template_sc0.nii.gz.
  • C57BL6_mouse.iso_registered.nii.gz: This is the output image created by reg_aladin when registering the C57BL6_mouse.iso.nii.gz file to the NP_template_sc0.nii.gz.
  • Nifti_Trakte_V2: These are the updated tracts (NV).
  • Tract_Density: This folder contains the density of each generated tract mask, saved from DSI-Studio.