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Collection of all datasets used to develope AIDAqc

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README.md

Collection of all datasets used to develop AIDAqc

This dataset is a super-dataset containing all datasets used to develop the AIDAqc pipeline and corresponds to the following Publication: Automated quality control of small animal MR neuroimaging data, DOI: tbd

In the case you are accessing this dataset via a gin.gnode.org DOI link: note that to access the seperate datasets please click on the BROWSE REPOSITORY to browse the live dataset's content on GIN (contains updates). If you click on BROWSE ARCHIVE no data will be downloaded.

Dataset structure:

  • All input datasets (i.e. building blocks from other sources) are located in inputs/.

  • All code is located in code/ as a subdataset linked to GitHub.

  • The final result of AIDAqc on each dataset is located in each datasets output/ folder.

  • All of documentation about this project can be accessed via this link or via the added subdataset in doc/ folder.

Additional Information:

The following publication was used as a reference to create this structured dataset:

DOI:10.1038/s41597-023-02242-8

datacite.yml
Title Automated quality control of small animal MR neuroimaging data
Authors Aswendt,Markus;University of Cologne, Faculty of Medicine and University Hospital Cologne, Department of Neurology, Cologne, Germany ;ORCID:0000-0003-1423-0934
Kalantari,Aref;University of Cologne, Faculty of Medicine and University Hospital Cologne, Department of Neurology, Cologne, Germany ;ORCID:0000-0003-3050-0930
Description This dataset is a super-dataset containing all datasets used to develop the AIDAqc pipeline and corresponds to the following Publication (DOI): tbd
License CC BY-NC-SA 4.0 (https://creativecommons.org/licenses/by-nc-sa/4.0/)
References Aref Kalantari, Mehrab Shahbazi, Marc Schneider, Victor Vera Frazão, Avnish Bhattrai, Lorenzo Carnevale, Yujian Diao, Bart A. A. Franx, Francesco Gammaraccio, Lisa-Marie Goncalves, Esther M. van Leeuwen, Annika Michalek, Susanne Mueller, Alejandro Rivera Olvera, Daniel Padro, Adam C. Raikes, Mohamed Kotb Selim, Annette van der Toorn, Roël Vrooman, Patricia Wenk, Philipp Boehm-Sturm, Roberta Diaz Brinton, Eike Budinger, Santiago Canals, Elisenda Eixarch, Giuseppe Lembo, Gianluigi Forloni, Joanes Grandjean, Dario Livio Longo, Khan Hekmatyar, Russell E. Jacobs, Ileana Jelescu, Nyoman D. Kurniawan, Naomi S. Sta Maria, Pedro Ramos-Cabrer, Wilfried Reichardt, Guadalupe Soria, Edoardo Micotti, Emma Muñoz-Moreno, Silvia De Santis, Rick M. Dijkhuizen, Giovanna D. Ielacqua, Markus Aswendt*, 'Automated quality control of preclinical MR neuroimaging data', Available at: DOI:tba. [doi:tba] (IsSupplementTo)
Funding DFG; 431549029 – SFB 1451
Friebe Foundation; T0498/28960/16
Keywords Quality-control
MRI
Preclinical-imaging
DataLad
Resource Type Dataset