feat2_pre 39 KB

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  1. </pre><hr>Higher-level input files preparation<br><pre>
  2. /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat
  3. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_OZqSlC -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  4. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_yKp7hv -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  5. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_hsKEL8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  6. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_DFJKat -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  7. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_1XpUQH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  8. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_ybIur4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  9. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_oiD37v -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  10. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_GQblWQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  11. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_xpcYpf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  12. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_2NRfWz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  13. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_IuuiFN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  14. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_Pq3pUa -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  15. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_YeDhLy -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  16. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_YU3DdT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  17. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_C9Hiwh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  18. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_Sbye1O -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  19. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_75ZKtc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  20. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_yI6YXI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  21. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_m5ath0 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  22. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_nolgPn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  23. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_ASnqGN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  24. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_HEy9eX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  25. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_ss0eNo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  26. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_PouqFM -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  27. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_5RCXxg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  28. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_XDfvaJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  29. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_WBNufd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  30. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_mWSDID -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  31. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_gtVSx1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  32. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_FqmMai -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  33. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_mkFhsH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  34. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_GxtTS3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  35. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_lnd9vg -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
  36. /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat
  37. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_iUgWmK -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  38. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_SeGjfu -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  39. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_hhFE9j -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  40. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_pTkh8L -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  41. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_Xop8x7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  42. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_XqEAJl -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  43. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_UtuHLK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  44. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_1ALLIa -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  45. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_bRTj8p -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  46. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_1oHkXM -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  47. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_j1F75c -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  48. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_e6wTPw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  49. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_trGk48 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  50. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_Rr0R8r -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  51. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_rotQ3M -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  52. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_S7maHe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  53. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_c3pNRr -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  54. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_O7x20M -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  55. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_hyjnQa -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  56. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_OzdtOl -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  57. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_F0n8sN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  58. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_v3KqEf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  59. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_0fVIMs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  60. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_FoqoaR -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  61. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_c8ALUc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  62. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_aYDHxu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  63. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_VsTPvU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  64. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_IWCmrd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  65. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_sy0Onq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  66. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_6P2o1N -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  67. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_FejkP7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  68. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_OfHdEs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  69. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_VVkwnU -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
  70. /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat
  71. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_Qngmpm -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  72. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_ovncib -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  73. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_oPuOkP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  74. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_pbOQ7f -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  75. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_FH1o6C -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  76. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_mmdv5W -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  77. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_1LV4Gr -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  78. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_QXkLtE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  79. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_KvmYoa -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  80. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_o9THaB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  81. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_iw4DH1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  82. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_2829Lp -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  83. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_ruqfCJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  84. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_YqT7b5 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  85. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_ddLyQB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  86. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_OMSHEL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  87. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_Wl2x9d -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  88. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_LG8TDE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  89. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_oWw3WU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  90. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_hwlfpm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  91. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_CWXjvF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  92. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_UgsbiV -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  93. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_slAaPn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  94. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_x8uy0O -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  95. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_VZiwU5 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  96. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_QxlAWz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  97. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_VVXIbT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  98. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_Y9FsEe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  99. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_FJusaD -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  100. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_jLiuMX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  101. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_LHYFda -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  102. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_NsGUlu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  103. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_IX0SNS -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
  104. /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat
  105. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_eJCRTa -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  106. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_ni0HX4 -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  107. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_rz6hNO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  108. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_9fYG1a -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  109. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_3m5WBq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  110. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_RflfwL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  111. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_VnPpL3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  112. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_aA0Kps -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  113. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_aqM0mT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  114. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_KvClq7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  115. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_jEBcOs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  116. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_yYjJ47 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  117. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_6CBrnq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  118. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_42XiIO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  119. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_mnXUDf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  120. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_vmNW4r -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  121. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_1gxr6P -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  122. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_DJIZVb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  123. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_YqpQip -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  124. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_Tb2CVM -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  125. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_fe0SF9 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  126. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_VJgfAt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  127. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_exyxrT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  128. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_pyTPBf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  129. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_KubMZv -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  130. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_sf25N0 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  131. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_9wlClq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  132. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_tdIYNC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  133. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_1Ictpc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  134. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_JAGRTB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  135. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_0D5yt8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  136. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_qcHM4u -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  137. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_QarQkW -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
  138. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg/standard bg_image
  139. /usr/share/fsl/5.0/bin/fslmerge -t mask /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/mask
  140. mkdir -p inputreg
  141. /usr/share/fsl/5.0/bin/fslmaths ../mask -mul 4 -Tmean masksum -odt short
  142. /usr/share/fsl/5.0/bin/fslmaths masksum -thr 4 -add masksum masksum
  143. /usr/share/fsl/5.0/bin/overlay 0 0 -c ../bg_image -a masksum 0.9 8 masksum_overlay
  144. /usr/share/fsl/5.0/bin/slicer masksum_overlay -S 2 750 masksum_overlay.png
  145. /usr/share/fsl/5.0/bin/fslmaths masksum -mul 0 maskunique
  146. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/mask -mul -1 -add 1 -mul 1 -add maskunique maskunique
  147. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/mask -mul -1 -add 1 -mul 2 -add maskunique maskunique
  148. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/mask -mul -1 -add 1 -mul 3 -add maskunique maskunique
  149. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/mask -mul -1 -add 1 -mul 4 -add maskunique maskunique
  150. /usr/share/fsl/5.0/bin/fslmaths masksum -thr 3 -uthr 3 -bin -mul maskunique maskunique
  151. /usr/share/fsl/5.0/bin/overlay 0 0 ../bg_image -a maskunique 0.9 4 maskunique_overlay
  152. /usr/share/fsl/5.0/bin/slicer maskunique_overlay -S 2 750 maskunique_overlay.png
  153. /bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif
  154. /usr/share/fsl/5.0/bin/fslmaths mask -Tmin mask
  155. /usr/share/fsl/5.0/bin/fslmerge -t mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/mean_func
  156. /usr/share/fsl/5.0/bin/fslmaths mean_func -Tmean mean_func
  157. /usr/share/fsl/5.0/bin/fslmerge -t cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope1
  158. /usr/share/fsl/5.0/bin/fslmaths cope1 -mas mask cope1
  159. printf '0.210597725 ' >> design.lcon
  160. /usr/share/fsl/5.0/bin/fslmerge -t varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope1
  161. /usr/share/fsl/5.0/bin/fslmaths varcope1 -mas mask varcope1
  162. /usr/share/fsl/5.0/bin/fslmerge -t cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope2
  163. /usr/share/fsl/5.0/bin/fslmaths cope2 -mas mask cope2
  164. printf '0.23317175 ' >> design.lcon
  165. /usr/share/fsl/5.0/bin/fslmerge -t varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope2
  166. /usr/share/fsl/5.0/bin/fslmaths varcope2 -mas mask varcope2
  167. /usr/share/fsl/5.0/bin/fslmerge -t cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope3
  168. /usr/share/fsl/5.0/bin/fslmaths cope3 -mas mask cope3
  169. printf '0.29648985 ' >> design.lcon
  170. /usr/share/fsl/5.0/bin/fslmerge -t varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope3
  171. /usr/share/fsl/5.0/bin/fslmaths varcope3 -mas mask varcope3
  172. /usr/share/fsl/5.0/bin/fslmerge -t cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope4
  173. /usr/share/fsl/5.0/bin/fslmaths cope4 -mas mask cope4
  174. printf '0.2345421 ' >> design.lcon
  175. /usr/share/fsl/5.0/bin/fslmerge -t varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope4
  176. /usr/share/fsl/5.0/bin/fslmaths varcope4 -mas mask varcope4
  177. /usr/share/fsl/5.0/bin/fslmerge -t cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope5
  178. /usr/share/fsl/5.0/bin/fslmaths cope5 -mas mask cope5
  179. printf '0.23273717500000002 ' >> design.lcon
  180. /usr/share/fsl/5.0/bin/fslmerge -t varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope5
  181. /usr/share/fsl/5.0/bin/fslmaths varcope5 -mas mask varcope5
  182. /usr/share/fsl/5.0/bin/fslmerge -t cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope6
  183. /usr/share/fsl/5.0/bin/fslmaths cope6 -mas mask cope6
  184. printf '0.23273717500000002 ' >> design.lcon
  185. /usr/share/fsl/5.0/bin/fslmerge -t varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope6
  186. /usr/share/fsl/5.0/bin/fslmaths varcope6 -mas mask varcope6
  187. /usr/share/fsl/5.0/bin/fslmerge -t cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope7
  188. /usr/share/fsl/5.0/bin/fslmaths cope7 -mas mask cope7
  189. printf '0.578855225 ' >> design.lcon
  190. /usr/share/fsl/5.0/bin/fslmerge -t varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope7
  191. /usr/share/fsl/5.0/bin/fslmaths varcope7 -mas mask varcope7
  192. /usr/share/fsl/5.0/bin/fslmerge -t cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope8
  193. /usr/share/fsl/5.0/bin/fslmaths cope8 -mas mask cope8
  194. printf '0.58811725 ' >> design.lcon
  195. /usr/share/fsl/5.0/bin/fslmerge -t varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope8
  196. /usr/share/fsl/5.0/bin/fslmaths varcope8 -mas mask varcope8
  197. /usr/share/fsl/5.0/bin/fslmerge -t cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope9
  198. /usr/share/fsl/5.0/bin/fslmaths cope9 -mas mask cope9
  199. printf '0.582861875 ' >> design.lcon
  200. /usr/share/fsl/5.0/bin/fslmerge -t varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope9
  201. /usr/share/fsl/5.0/bin/fslmaths varcope9 -mas mask varcope9
  202. /usr/share/fsl/5.0/bin/fslmerge -t cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope10
  203. /usr/share/fsl/5.0/bin/fslmaths cope10 -mas mask cope10
  204. printf '1.15512225 ' >> design.lcon
  205. /usr/share/fsl/5.0/bin/fslmerge -t varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope10
  206. /usr/share/fsl/5.0/bin/fslmaths varcope10 -mas mask varcope10
  207. /usr/share/fsl/5.0/bin/fslmerge -t cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope11
  208. /usr/share/fsl/5.0/bin/fslmaths cope11 -mas mask cope11
  209. printf '1.1392815 ' >> design.lcon
  210. /usr/share/fsl/5.0/bin/fslmerge -t varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope11
  211. /usr/share/fsl/5.0/bin/fslmaths varcope11 -mas mask varcope11
  212. /usr/share/fsl/5.0/bin/fslmerge -t cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope12
  213. /usr/share/fsl/5.0/bin/fslmaths cope12 -mas mask cope12
  214. printf '0.5689161 ' >> design.lcon
  215. /usr/share/fsl/5.0/bin/fslmerge -t varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope12
  216. /usr/share/fsl/5.0/bin/fslmaths varcope12 -mas mask varcope12
  217. /usr/share/fsl/5.0/bin/fslmerge -t cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope13
  218. /usr/share/fsl/5.0/bin/fslmaths cope13 -mas mask cope13
  219. printf '1.1549005 ' >> design.lcon
  220. /usr/share/fsl/5.0/bin/fslmerge -t varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope13
  221. /usr/share/fsl/5.0/bin/fslmaths varcope13 -mas mask varcope13
  222. /usr/share/fsl/5.0/bin/fslmerge -t cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope14
  223. /usr/share/fsl/5.0/bin/fslmaths cope14 -mas mask cope14
  224. printf '1.137175 ' >> design.lcon
  225. /usr/share/fsl/5.0/bin/fslmerge -t varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope14
  226. /usr/share/fsl/5.0/bin/fslmaths varcope14 -mas mask varcope14
  227. /usr/share/fsl/5.0/bin/fslmerge -t cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/cope15
  228. /usr/share/fsl/5.0/bin/fslmaths cope15 -mas mask cope15
  229. printf '1.136865 ' >> design.lcon
  230. /usr/share/fsl/5.0/bin/fslmerge -t varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-1.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-2.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-3.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-16/run-4.feat/reg_standard/stats/varcope15
  231. /usr/share/fsl/5.0/bin/fslmaths varcope15 -mas mask varcope15