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report_log.html

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  1. <HTML><HEAD>
    2. 

  2. <!--refreshstart-->
    3. 

  3. 

  4. <!--refreshstop-->
    5. 

  5. <link REL=stylesheet TYPE=text/css href=.files/fsl.css>
    6. 

  6. <TITLE>FSL</TITLE></HEAD><BODY><OBJECT data=report.html></OBJECT>
    7. 

  7. <h2>Progress Report / Log</h2>
    8. 

  8. Started at Tue Mar 22 16:17:11 CET 2016<p>
    9. 

  9. <pre>
    10. 

  10. 

  11. cp -r ../.files .files
    12. 

  12. </pre><hr>Higher-level stats<br><pre>
    13. 

  13. 

  14. cat ../design.lcon | awk '{ print  }' > design.lcon
    15. 

  15. 

  16. /usr/share/fsl/5.0/bin/fslsplit mask tmpmask -z
    17. 

  17. 

  18. /usr/share/fsl/5.0/bin/fslsplit filtered_func_data tmpcope -z
    19. 

  19. 

  20. /usr/share/fsl/5.0/bin/fslsplit var_filtered_func_data tmpvarcope -z
    21. 

  21. /usr/share/fsl/5.0/bin/flameo --cope=tmpcope0000 --vc=tmpvarcope0000  --mask=tmpmask0000 --ld=stats0000 --dm=design.mat --cs=design.grp --tc=design.con  --io --runmode=flame1
    22. 

  22. Log directory is: stats0000
    23. 

  23. Setting up:
    24. 

  24. ntptsing=4.000000 
    25. 

  25. 

  26. evs_group=1.000000 
    27. 

  27. 

  28. No f contrasts
    29. 

  29. 

  30. WARNING: The passed in varcope file, tmpvarcope0000, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    31. 

  31. nevs=1
    32. 

  32. ntpts=4
    33. 

  33. ngs=1
    34. 

  34. nvoxels=284
    35. 

  35. Running:
    36. 

  36. nmaskvoxels=284
    37. 

  37.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    38. 

  38. nmaskvoxels=284
    39. 

  39. Saving results
    40. 

  40. 

  41. Log directory was: stats0000
    42. 

  42. Log directory is: stats0009
    43. 

  43. Setting up:
    44. 

  44. ntptsing=4.000000 
    45. 

  45. 

  46. evs_group=1.000000 
    47. 

  47. 

  48. No f contrasts
    49. 

  49. 

  50. WARNING: The passed in varcope file, tmpvarcope0009, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    51. 

  51. nevs=1
    52. 

  52. ntpts=4
    53. 

  53. ngs=1
    54. 

  54. nvoxels=2664
    55. 

  55. Running:
    56. 

  56. nmaskvoxels=2664
    57. 

  57.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    58. 

  58. nmaskvoxels=2664
    59. 

  59. Saving results
    60. 

  60. 

  61. Log directory was: stats0009
    62. 

  62. Log directory is: stats0010
    63. 

  63. Setting up:
    64. 

  64. ntptsing=4.000000 
    65. 

  65. 

  66. evs_group=1.000000 
    67. 

  67. 

  68. No f contrasts
    69. 

  69. 

  70. WARNING: The passed in varcope file, tmpvarcope0010, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    71. 

  71. nevs=1
    72. 

  72. ntpts=4
    73. 

  73. ngs=1
    74. 

  74. nvoxels=2798
    75. 

  75. Running:
    76. 

  76. nmaskvoxels=2798
    77. 

  77.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    78. 

  78. nmaskvoxels=2798
    79. 

  79. Saving results
    80. 

  80. 

  81. Log directory was: stats0010
    82. 

  82. Log directory is: stats0011
    83. 

  83. Setting up:
    84. 

  84. ntptsing=4.000000 
    85. 

  85. 

  86. evs_group=1.000000 
    87. 

  87. 

  88. No f contrasts
    89. 

  89. 

  90. WARNING: The passed in varcope file, tmpvarcope0011, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    91. 

  91. nevs=1
    92. 

  92. ntpts=4
    93. 

  93. ngs=1
    94. 

  94. nvoxels=2914
    95. 

  95. Running:
    96. 

  96. nmaskvoxels=2914
    97. 

  97.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    98. 

  98. nmaskvoxels=2914
    99. 

  99. Saving results
    100. 

  100. 

  101. Log directory was: stats0011
    102. 

  102. Log directory is: stats0012
    103. 

  103. Setting up:
    104. 

  104. ntptsing=4.000000 
    105. 

  105. 

  106. evs_group=1.000000 
    107. 

  107. 

  108. No f contrasts
    109. 

  109. 

  110. WARNING: The passed in varcope file, tmpvarcope0012, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    111. 

  111. nevs=1
    112. 

  112. ntpts=4
    113. 

  113. ngs=1
    114. 

  114. nvoxels=3036
    115. 

  115. Running:
    116. 

  116. nmaskvoxels=3036
    117. 

  117.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    118. 

  118. nmaskvoxels=3036
    119. 

  119. Saving results
    120. 

  120. 

  121. Log directory was: stats0012
    122. 

  122. Log directory is: stats0013
    123. 

  123. Setting up:
    124. 

  124. ntptsing=4.000000 
    125. 

  125. 

  126. evs_group=1.000000 
    127. 

  127. 

  128. No f contrasts
    129. 

  129. 

  130. WARNING: The passed in varcope file, tmpvarcope0013, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    131. 

  131. nevs=1
    132. 

  132. ntpts=4
    133. 

  133. ngs=1
    134. 

  134. nvoxels=3092
    135. 

  135. Running:
    136. 

  136. nmaskvoxels=3092
    137. 

  137.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    138. 

  138. nmaskvoxels=3092
    139. 

  139. Saving results
    140. 

  140. 

  141. Log directory was: stats0013
    142. 

  142. Log directory is: stats0014
    143. 

  143. Setting up:
    144. 

  144. ntptsing=4.000000 
    145. 

  145. 

  146. evs_group=1.000000 
    147. 

  147. 

  148. No f contrasts
    149. 

  149. 

  150. WARNING: The passed in varcope file, tmpvarcope0014, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    151. 

  151. nevs=1
    152. 

  152. ntpts=4
    153. 

  153. ngs=1
    154. 

  154. nvoxels=3152
    155. 

  155. Running:
    156. 

  156. nmaskvoxels=3152
    157. 

  157.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    158. 

  158. nmaskvoxels=3152
    159. 

  159. Saving results
    160. 

  160. 

  161. Log directory was: stats0014
    162. 

  162. Log directory is: stats0015
    163. 

  163. Setting up:
    164. 

  164. ntptsing=4.000000 
    165. 

  165. 

  166. evs_group=1.000000 
    167. 

  167. 

  168. No f contrasts
    169. 

  169. 

  170. WARNING: The passed in varcope file, tmpvarcope0015, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    171. 

  171. nevs=1
    172. 

  172. ntpts=4
    173. 

  173. ngs=1
    174. 

  174. nvoxels=3223
    175. 

  175. Running:
    176. 

  176. nmaskvoxels=3223
    177. 

  177.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    178. 

  178. nmaskvoxels=3223
    179. 

  179. Saving results
    180. 

  180. 

  181. Log directory was: stats0015
    182. 

  182. Log directory is: stats0016
    183. 

  183. Setting up:
    184. 

  184. ntptsing=4.000000 
    185. 

  185. 

  186. evs_group=1.000000 
    187. 

  187. 

  188. No f contrasts
    189. 

  189. 

  190. WARNING: The passed in varcope file, tmpvarcope0016, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    191. 

  191. nevs=1
    192. 

  192. ntpts=4
    193. 

  193. ngs=1
    194. 

  194. nvoxels=3271
    195. 

  195. Running:
    196. 

  196. nmaskvoxels=3271
    197. 

  197.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    198. 

  198. nmaskvoxels=3271
    199. 

  199. Saving results
    200. 

  200. 

  201. Log directory was: stats0016
    202. 

  202. Log directory is: stats0017
    203. 

  203. Setting up:
    204. 

  204. ntptsing=4.000000 
    205. 

  205. 

  206. evs_group=1.000000 
    207. 

  207. 

  208. No f contrasts
    209. 

  209. 

  210. WARNING: The passed in varcope file, tmpvarcope0017, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    211. 

  211. nevs=1
    212. 

  212. ntpts=4
    213. 

  213. ngs=1
    214. 

  214. nvoxels=3360
    215. 

  215. Running:
    216. 

  216. nmaskvoxels=3360
    217. 

  217.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    218. 

  218. nmaskvoxels=3360
    219. 

  219. Saving results
    220. 

  220. 

  221. Log directory was: stats0017
    222. 

  222. Log directory is: stats0018
    223. 

  223. Setting up:
    224. 

  224. ntptsing=4.000000 
    225. 

  225. 

  226. evs_group=1.000000 
    227. 

  227. 

  228. No f contrasts
    229. 

  229. 

  230. WARNING: The passed in varcope file, tmpvarcope0018, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    231. 

  231. nevs=1
    232. 

  232. ntpts=4
    233. 

  233. ngs=1
    234. 

  234. nvoxels=3406
    235. 

  235. Running:
    236. 

  236. nmaskvoxels=3406
    237. 

  237.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    238. 

  238. nmaskvoxels=3406
    239. 

  239. Saving results
    240. 

  240. 

  241. Log directory was: stats0018
    242. 

  242. Log directory is: stats0001
    243. 

  243. Setting up:
    244. 

  244. ntptsing=4.000000 
    245. 

  245. 

  246. evs_group=1.000000 
    247. 

  247. 

  248. No f contrasts
    249. 

  249. 

  250. WARNING: The passed in varcope file, tmpvarcope0001, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    251. 

  251. nevs=1
    252. 

  252. ntpts=4
    253. 

  253. ngs=1
    254. 

  254. nvoxels=1354
    255. 

  255. Running:
    256. 

  256. nmaskvoxels=1354
    257. 

  257.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    258. 

  258. nmaskvoxels=1354
    259. 

  259. Saving results
    260. 

  260. 

  261. Log directory was: stats0001
    262. 

  262. Log directory is: stats0019
    263. 

  263. Setting up:
    264. 

  264. ntptsing=4.000000 
    265. 

  265. 

  266. evs_group=1.000000 
    267. 

  267. 

  268. No f contrasts
    269. 

  269. 

  270. WARNING: The passed in varcope file, tmpvarcope0019, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    271. 

  271. nevs=1
    272. 

  272. ntpts=4
    273. 

  273. ngs=1
    274. 

  274. nvoxels=3441
    275. 

  275. Running:
    276. 

  276. nmaskvoxels=3441
    277. 

  277.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    278. 

  278. nmaskvoxels=3441
    279. 

  279. Saving results
    280. 

  280. 

  281. Log directory was: stats0019
    282. 

  282. Log directory is: stats0020
    283. 

  283. Setting up:
    284. 

  284. ntptsing=4.000000 
    285. 

  285. 

  286. evs_group=1.000000 
    287. 

  287. 

  288. No f contrasts
    289. 

  289. 

  290. WARNING: The passed in varcope file, tmpvarcope0020, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    291. 

  291. nevs=1
    292. 

  292. ntpts=4
    293. 

  293. ngs=1
    294. 

  294. nvoxels=3446
    295. 

  295. Running:
    296. 

  296. nmaskvoxels=3446
    297. 

  297.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    298. 

  298. nmaskvoxels=3446
    299. 

  299. Saving results
    300. 

  300. 

  301. Log directory was: stats0020
    302. 

  302. Log directory is: stats0021
    303. 

  303. Setting up:
    304. 

  304. ntptsing=4.000000 
    305. 

  305. 

  306. evs_group=1.000000 
    307. 

  307. 

  308. No f contrasts
    309. 

  309. 

  310. WARNING: The passed in varcope file, tmpvarcope0021, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    311. 

  311. nevs=1
    312. 

  312. ntpts=4
    313. 

  313. ngs=1
    314. 

  314. nvoxels=3432
    315. 

  315. Running:
    316. 

  316. nmaskvoxels=3432
    317. 

  317.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    318. 

  318. nmaskvoxels=3432
    319. 

  319. Saving results
    320. 

  320. 

  321. Log directory was: stats0021
    322. 

  322. Log directory is: stats0022
    323. 

  323. Setting up:
    324. 

  324. ntptsing=4.000000 
    325. 

  325. 

  326. evs_group=1.000000 
    327. 

  327. 

  328. No f contrasts
    329. 

  329. 

  330. WARNING: The passed in varcope file, tmpvarcope0022, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    331. 

  331. nevs=1
    332. 

  332. ntpts=4
    333. 

  333. ngs=1
    334. 

  334. nvoxels=3429
    335. 

  335. Running:
    336. 

  336. nmaskvoxels=3429
    337. 

  337.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    338. 

  338. nmaskvoxels=3429
    339. 

  339. Saving results
    340. 

  340. 

  341. Log directory was: stats0022
    342. 

  342. Log directory is: stats0023
    343. 

  343. Setting up:
    344. 

  344. ntptsing=4.000000 
    345. 

  345. 

  346. evs_group=1.000000 
    347. 

  347. 

  348. No f contrasts
    349. 

  349. 

  350. WARNING: The passed in varcope file, tmpvarcope0023, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    351. 

  351. nevs=1
    352. 

  352. ntpts=4
    353. 

  353. ngs=1
    354. 

  354. nvoxels=3425
    355. 

  355. Running:
    356. 

  356. nmaskvoxels=3425
    357. 

  357.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    358. 

  358. nmaskvoxels=3425
    359. 

  359. Saving results
    360. 

  360. 

  361. Log directory was: stats0023
    362. 

  362. Log directory is: stats0024
    363. 

  363. Setting up:
    364. 

  364. ntptsing=4.000000 
    365. 

  365. 

  366. evs_group=1.000000 
    367. 

  367. 

  368. No f contrasts
    369. 

  369. 

  370. WARNING: The passed in varcope file, tmpvarcope0024, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    371. 

  371. nevs=1
    372. 

  372. ntpts=4
    373. 

  373. ngs=1
    374. 

  374. nvoxels=3421
    375. 

  375. Running:
    376. 

  376. nmaskvoxels=3421
    377. 

  377.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    378. 

  378. nmaskvoxels=3421
    379. 

  379. Saving results
    380. 

  380. 

  381. Log directory was: stats0024
    382. 

  382. Log directory is: stats0025
    383. 

  383. Setting up:
    384. 

  384. ntptsing=4.000000 
    385. 

  385. 

  386. evs_group=1.000000 
    387. 

  387. 

  388. No f contrasts
    389. 

  389. 

  390. WARNING: The passed in varcope file, tmpvarcope0025, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    391. 

  391. nevs=1
    392. 

  392. ntpts=4
    393. 

  393. ngs=1
    394. 

  394. nvoxels=3384
    395. 

  395. Running:
    396. 

  396. nmaskvoxels=3384
    397. 

  397.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    398. 

  398. nmaskvoxels=3384
    399. 

  399. Saving results
    400. 

  400. 

  401. Log directory was: stats0025
    402. 

  402. Log directory is: stats0026
    403. 

  403. Setting up:
    404. 

  404. ntptsing=4.000000 
    405. 

  405. 

  406. evs_group=1.000000 
    407. 

  407. 

  408. No f contrasts
    409. 

  409. 

  410. WARNING: The passed in varcope file, tmpvarcope0026, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    411. 

  411. nevs=1
    412. 

  412. ntpts=4
    413. 

  413. ngs=1
    414. 

  414. nvoxels=3323
    415. 

  415. Running:
    416. 

  416. nmaskvoxels=3323
    417. 

  417.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    418. 

  418. nmaskvoxels=3323
    419. 

  419. Saving results
    420. 

  420. 

  421. Log directory was: stats0026
    422. 

  422. Log directory is: stats0027
    423. 

  423. Setting up:
    424. 

  424. ntptsing=4.000000 
    425. 

  425. 

  426. evs_group=1.000000 
    427. 

  427. 

  428. No f contrasts
    429. 

  429. 

  430. WARNING: The passed in varcope file, tmpvarcope0027, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    431. 

  431. nevs=1
    432. 

  432. ntpts=4
    433. 

  433. ngs=1
    434. 

  434. nvoxels=3241
    435. 

  435. Running:
    436. 

  436. nmaskvoxels=3241
    437. 

  437.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    438. 

  438. nmaskvoxels=3241
    439. 

  439. Saving results
    440. 

  440. 

  441. Log directory was: stats0027
    442. 

  442. Log directory is: stats0028
    443. 

  443. Setting up:
    444. 

  444. ntptsing=4.000000 
    445. 

  445. 

  446. evs_group=1.000000 
    447. 

  447. 

  448. No f contrasts
    449. 

  449. 

  450. WARNING: The passed in varcope file, tmpvarcope0028, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    451. 

  451. nevs=1
    452. 

  452. ntpts=4
    453. 

  453. ngs=1
    454. 

  454. nvoxels=3156
    455. 

  455. Running:
    456. 

  456. nmaskvoxels=3156
    457. 

  457.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    458. 

  458. nmaskvoxels=3156
    459. 

  459. Saving results
    460. 

  460. 

  461. Log directory was: stats0028
    462. 

  462. Log directory is: stats0002
    463. 

  463. Setting up:
    464. 

  464. ntptsing=4.000000 
    465. 

  465. 

  466. evs_group=1.000000 
    467. 

  467. 

  468. No f contrasts
    469. 

  469. 

  470. WARNING: The passed in varcope file, tmpvarcope0002, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    471. 

  471. nevs=1
    472. 

  472. ntpts=4
    473. 

  473. ngs=1
    474. 

  474. nvoxels=1563
    475. 

  475. Running:
    476. 

  476. nmaskvoxels=1563
    477. 

  477.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    478. 

  478. nmaskvoxels=1563
    479. 

  479. Saving results
    480. 

  480. 

  481. Log directory was: stats0002
    482. 

  482. Log directory is: stats0029
    483. 

  483. Setting up:
    484. 

  484. ntptsing=4.000000 
    485. 

  485. 

  486. evs_group=1.000000 
    487. 

  487. 

  488. No f contrasts
    489. 

  489. 

  490. WARNING: The passed in varcope file, tmpvarcope0029, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    491. 

  491. nevs=1
    492. 

  492. ntpts=4
    493. 

  493. ngs=1
    494. 

  494. nvoxels=3048
    495. 

  495. Running:
    496. 

  496. nmaskvoxels=3048
    497. 

  497.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    498. 

  498. nmaskvoxels=3048
    499. 

  499. Saving results
    500. 

  500. 

  501. Log directory was: stats0029
    502. 

  502. Log directory is: stats0030
    503. 

  503. Setting up:
    504. 

  504. ntptsing=4.000000 
    505. 

  505. 

  506. evs_group=1.000000 
    507. 

  507. 

  508. No f contrasts
    509. 

  509. 

  510. WARNING: The passed in varcope file, tmpvarcope0030, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    511. 

  511. nevs=1
    512. 

  512. ntpts=4
    513. 

  513. ngs=1
    514. 

  514. nvoxels=2955
    515. 

  515. Running:
    516. 

  516. nmaskvoxels=2955
    517. 

  517.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    518. 

  518. nmaskvoxels=2955
    519. 

  519. Saving results
    520. 

  520. 

  521. Log directory was: stats0030
    522. 

  522. Log directory is: stats0031
    523. 

  523. Setting up:
    524. 

  524. ntptsing=4.000000 
    525. 

  525. 

  526. evs_group=1.000000 
    527. 

  527. 

  528. No f contrasts
    529. 

  529. 

  530. WARNING: The passed in varcope file, tmpvarcope0031, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    531. 

  531. nevs=1
    532. 

  532. ntpts=4
    533. 

  533. ngs=1
    534. 

  534. nvoxels=2843
    535. 

  535. Running:
    536. 

  536. nmaskvoxels=2843
    537. 

  537.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    538. 

  538. nmaskvoxels=2843
    539. 

  539. Saving results
    540. 

  540. 

  541. Log directory was: stats0031
    542. 

  542. Log directory is: stats0032
    543. 

  543. Setting up:
    544. 

  544. ntptsing=4.000000 
    545. 

  545. 

  546. evs_group=1.000000 
    547. 

  547. 

  548. No f contrasts
    549. 

  549. 

  550. WARNING: The passed in varcope file, tmpvarcope0032, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    551. 

  551. nevs=1
    552. 

  552. ntpts=4
    553. 

  553. ngs=1
    554. 

  554. nvoxels=2700
    555. 

  555. Running:
    556. 

  556. nmaskvoxels=2700
    557. 

  557.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    558. 

  558. nmaskvoxels=2700
    559. 

  559. Saving results
    560. 

  560. 

  561. Log directory was: stats0032
    562. 

  562. Log directory is: stats0033
    563. 

  563. Setting up:
    564. 

  564. ntptsing=4.000000 
    565. 

  565. 

  566. evs_group=1.000000 
    567. 

  567. 

  568. No f contrasts
    569. 

  569. 

  570. WARNING: The passed in varcope file, tmpvarcope0033, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    571. 

  571. nevs=1
    572. 

  572. ntpts=4
    573. 

  573. ngs=1
    574. 

  574. nvoxels=2555
    575. 

  575. Running:
    576. 

  576. nmaskvoxels=2555
    577. 

  577.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    578. 

  578. nmaskvoxels=2555
    579. 

  579. Saving results
    580. 

  580. 

  581. Log directory was: stats0033
    582. 

  582. Log directory is: stats0034
    583. 

  583. Setting up:
    584. 

  584. ntptsing=4.000000 
    585. 

  585. 

  586. evs_group=1.000000 
    587. 

  587. 

  588. No f contrasts
    589. 

  589. 

  590. WARNING: The passed in varcope file, tmpvarcope0034, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    591. 

  591. nevs=1
    592. 

  592. ntpts=4
    593. 

  593. ngs=1
    594. 

  594. nvoxels=2390
    595. 

  595. Running:
    596. 

  596. nmaskvoxels=2390
    597. 

  597.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    598. 

  598. nmaskvoxels=2390
    599. 

  599. Saving results
    600. 

  600. 

  601. Log directory was: stats0034
    602. 

  602. Log directory is: stats0035
    603. 

  603. Setting up:
    604. 

  604. ntptsing=4.000000 
    605. 

  605. 

  606. evs_group=1.000000 
    607. 

  607. 

  608. No f contrasts
    609. 

  609. 

  610. WARNING: The passed in varcope file, tmpvarcope0035, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    611. 

  611. nevs=1
    612. 

  612. ntpts=4
    613. 

  613. ngs=1
    614. 

  614. nvoxels=2234
    615. 

  615. Running:
    616. 

  616. nmaskvoxels=2234
    617. 

  617.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    618. 

  618. nmaskvoxels=2234
    619. 

  619. Saving results
    620. 

  620. 

  621. Log directory was: stats0035
    622. 

  622. Log directory is: stats0036
    623. 

  623. Setting up:
    624. 

  624. ntptsing=4.000000 
    625. 

  625. 

  626. evs_group=1.000000 
    627. 

  627. 

  628. No f contrasts
    629. 

  629. 

  630. WARNING: The passed in varcope file, tmpvarcope0036, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    631. 

  631. nevs=1
    632. 

  632. ntpts=4
    633. 

  633. ngs=1
    634. 

  634. nvoxels=2074
    635. 

  635. Running:
    636. 

  636. nmaskvoxels=2074
    637. 

  637.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    638. 

  638. nmaskvoxels=2074
    639. 

  639. Saving results
    640. 

  640. 

  641. Log directory was: stats0036
    642. 

  642. Log directory is: stats0037
    643. 

  643. Setting up:
    644. 

  644. ntptsing=4.000000 
    645. 

  645. 

  646. evs_group=1.000000 
    647. 

  647. 

  648. No f contrasts
    649. 

  649. 

  650. WARNING: The passed in varcope file, tmpvarcope0037, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    651. 

  651. nevs=1
    652. 

  652. ntpts=4
    653. 

  653. ngs=1
    654. 

  654. nvoxels=1906
    655. 

  655. Running:
    656. 

  656. nmaskvoxels=1906
    657. 

  657.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    658. 

  658. nmaskvoxels=1906
    659. 

  659. Saving results
    660. 

  660. 

  661. Log directory was: stats0037
    662. 

  662. Log directory is: stats0038
    663. 

  663. Setting up:
    664. 

  664. ntptsing=4.000000 
    665. 

  665. 

  666. evs_group=1.000000 
    667. 

  667. 

  668. No f contrasts
    669. 

  669. 

  670. WARNING: The passed in varcope file, tmpvarcope0038, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    671. 

  671. nevs=1
    672. 

  672. ntpts=4
    673. 

  673. ngs=1
    674. 

  674. nvoxels=1746
    675. 

  675. Running:
    676. 

  676. nmaskvoxels=1746
    677. 

  677.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    678. 

  678. nmaskvoxels=1746
    679. 

  679. Saving results
    680. 

  680. 

  681. Log directory was: stats0038
    682. 

  682. Log directory is: stats0003
    683. 

  683. Setting up:
    684. 

  684. ntptsing=4.000000 
    685. 

  685. 

  686. evs_group=1.000000 
    687. 

  687. 

  688. No f contrasts
    689. 

  689. 

  690. WARNING: The passed in varcope file, tmpvarcope0003, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    691. 

  691. nevs=1
    692. 

  692. ntpts=4
    693. 

  693. ngs=1
    694. 

  694. nvoxels=1791
    695. 

  695. Running:
    696. 

  696. nmaskvoxels=1791
    697. 

  697.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    698. 

  698. nmaskvoxels=1791
    699. 

  699. Saving results
    700. 

  700. 

  701. Log directory was: stats0003
    702. 

  702. Log directory is: stats0039
    703. 

  703. Setting up:
    704. 

  704. ntptsing=4.000000 
    705. 

  705. 

  706. evs_group=1.000000 
    707. 

  707. 

  708. No f contrasts
    709. 

  709. 

  710. WARNING: The passed in varcope file, tmpvarcope0039, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    711. 

  711. nevs=1
    712. 

  712. ntpts=4
    713. 

  713. ngs=1
    714. 

  714. nvoxels=1569
    715. 

  715. Running:
    716. 

  716. nmaskvoxels=1569
    717. 

  717.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    718. 

  718. nmaskvoxels=1569
    719. 

  719. Saving results
    720. 

  720. 

  721. Log directory was: stats0039
    722. 

  722. Log directory is: stats0040
    723. 

  723. Setting up:
    724. 

  724. ntptsing=4.000000 
    725. 

  725. 

  726. evs_group=1.000000 
    727. 

  727. 

  728. No f contrasts
    729. 

  729. 

  730. WARNING: The passed in varcope file, tmpvarcope0040, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    731. 

  731. nevs=1
    732. 

  732. ntpts=4
    733. 

  733. ngs=1
    734. 

  734. nvoxels=1399
    735. 

  735. Running:
    736. 

  736. nmaskvoxels=1399
    737. 

  737.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    738. 

  738. nmaskvoxels=1399
    739. 

  739. Saving results
    740. 

  740. 

  741. Log directory was: stats0040
    742. 

  742. Log directory is: stats0041
    743. 

  743. Setting up:
    744. 

  744. ntptsing=4.000000 
    745. 

  745. 

  746. evs_group=1.000000 
    747. 

  747. 

  748. No f contrasts
    749. 

  749. 

  750. WARNING: The passed in varcope file, tmpvarcope0041, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    751. 

  751. nevs=1
    752. 

  752. ntpts=4
    753. 

  753. ngs=1
    754. 

  754. nvoxels=1219
    755. 

  755. Running:
    756. 

  756. nmaskvoxels=1219
    757. 

  757.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    758. 

  758. nmaskvoxels=1219
    759. 

  759. Saving results
    760. 

  760. 

  761. Log directory was: stats0041
    762. 

  762. Log directory is: stats0042
    763. 

  763. Setting up:
    764. 

  764. ntptsing=4.000000 
    765. 

  765. 

  766. evs_group=1.000000 
    767. 

  767. 

  768. No f contrasts
    769. 

  769. 

  770. WARNING: The passed in varcope file, tmpvarcope0042, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    771. 

  771. nevs=1
    772. 

  772. ntpts=4
    773. 

  773. ngs=1
    774. 

  774. nvoxels=1035
    775. 

  775. Running:
    776. 

  776. nmaskvoxels=1035
    777. 

  777.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    778. 

  778. nmaskvoxels=1035
    779. 

  779. Saving results
    780. 

  780. 

  781. Log directory was: stats0042
    782. 

  782. Log directory is: stats0043
    783. 

  783. Setting up:
    784. 

  784. ntptsing=4.000000 
    785. 

  785. 

  786. evs_group=1.000000 
    787. 

  787. 

  788. No f contrasts
    789. 

  789. 

  790. WARNING: The passed in varcope file, tmpvarcope0043, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    791. 

  791. nevs=1
    792. 

  792. ntpts=4
    793. 

  793. ngs=1
    794. 

  794. nvoxels=852
    795. 

  795. Running:
    796. 

  796. nmaskvoxels=852
    797. 

  797.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    798. 

  798. nmaskvoxels=852
    799. 

  799. Saving results
    800. 

  800. 

  801. Log directory was: stats0043
    802. 

  802. Log directory is: stats0044
    803. 

  803. Setting up:
    804. 

  804. ntptsing=4.000000 
    805. 

  805. 

  806. evs_group=1.000000 
    807. 

  807. 

  808. No f contrasts
    809. 

  809. 

  810. WARNING: The passed in varcope file, tmpvarcope0044, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    811. 

  811. nevs=1
    812. 

  812. ntpts=4
    813. 

  813. ngs=1
    814. 

  814. nvoxels=639
    815. 

  815. Running:
    816. 

  816. nmaskvoxels=639
    817. 

  817.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    818. 

  818. nmaskvoxels=639
    819. 

  819. Saving results
    820. 

  820. 

  821. Log directory was: stats0044
    822. 

  822. Log directory is: stats0004
    823. 

  823. Setting up:
    824. 

  824. ntptsing=4.000000 
    825. 

  825. 

  826. evs_group=1.000000 
    827. 

  827. 

  828. No f contrasts
    829. 

  829. 

  830. WARNING: The passed in varcope file, tmpvarcope0004, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    831. 

  831. nevs=1
    832. 

  832. ntpts=4
    833. 

  833. ngs=1
    834. 

  834. nvoxels=1978
    835. 

  835. Running:
    836. 

  836. nmaskvoxels=1978
    837. 

  837.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    838. 

  838. nmaskvoxels=1978
    839. 

  839. Saving results
    840. 

  840. 

  841. Log directory was: stats0004
    842. 

  842. Log directory is: stats0005
    843. 

  843. Setting up:
    844. 

  844. ntptsing=4.000000 
    845. 

  845. 

  846. evs_group=1.000000 
    847. 

  847. 

  848. No f contrasts
    849. 

  849. 

  850. WARNING: The passed in varcope file, tmpvarcope0005, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    851. 

  851. nevs=1
    852. 

  852. ntpts=4
    853. 

  853. ngs=1
    854. 

  854. nvoxels=2154
    855. 

  855. Running:
    856. 

  856. nmaskvoxels=2154
    857. 

  857.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    858. 

  858. nmaskvoxels=2154
    859. 

  859. Saving results
    860. 

  860. 

  861. Log directory was: stats0005
    862. 

  862. Log directory is: stats0006
    863. 

  863. Setting up:
    864. 

  864. ntptsing=4.000000 
    865. 

  865. 

  866. evs_group=1.000000 
    867. 

  867. 

  868. No f contrasts
    869. 

  869. 

  870. WARNING: The passed in varcope file, tmpvarcope0006, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    871. 

  871. nevs=1
    872. 

  872. ntpts=4
    873. 

  873. ngs=1
    874. 

  874. nvoxels=2320
    875. 

  875. Running:
    876. 

  876. nmaskvoxels=2320
    877. 

  877.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    878. 

  878. nmaskvoxels=2320
    879. 

  879. Saving results
    880. 

  880. 

  881. Log directory was: stats0006
    882. 

  882. Log directory is: stats0007
    883. 

  883. Setting up:
    884. 

  884. ntptsing=4.000000 
    885. 

  885. 

  886. evs_group=1.000000 
    887. 

  887. 

  888. No f contrasts
    889. 

  889. 

  890. WARNING: The passed in varcope file, tmpvarcope0007, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    891. 

  891. nevs=1
    892. 

  892. ntpts=4
    893. 

  893. ngs=1
    894. 

  894. nvoxels=2454
    895. 

  895. Running:
    896. 

  896. nmaskvoxels=2454
    897. 

  897.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    898. 

  898. nmaskvoxels=2454
    899. 

  899. Saving results
    900. 

  900. 

  901. Log directory was: stats0007
    902. 

  902. Log directory is: stats0008
    903. 

  903. Setting up:
    904. 

  904. ntptsing=4.000000 
    905. 

  905. 

  906. evs_group=1.000000 
    907. 

  907. 

  908. No f contrasts
    909. 

  909. 

  910. WARNING: The passed in varcope file, tmpvarcope0008, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
    911. 

  911. nevs=1
    912. 

  912. ntpts=4
    913. 

  913. ngs=1
    914. 

  914. nvoxels=2560
    915. 

  915. Running:
    916. 

  916. nmaskvoxels=2560
    917. 

  917.  1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
    918. 

  918. nmaskvoxels=2560
    919. 

  919. Saving results
    920. 

  920. 

  921. Log directory was: stats0008
    922. 

  922. 

  923. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/cope1.nii.gz stats0000/cope1 stats0001/cope1 stats0002/cope1 stats0003/cope1 stats0004/cope1 stats0005/cope1 stats0006/cope1 stats0007/cope1 stats0008/cope1 stats0009/cope1 stats0010/cope1 stats0011/cope1 stats0012/cope1 stats0013/cope1 stats0014/cope1 stats0015/cope1 stats0016/cope1 stats0017/cope1 stats0018/cope1 stats0019/cope1 stats0020/cope1 stats0021/cope1 stats0022/cope1 stats0023/cope1 stats0024/cope1 stats0025/cope1 stats0026/cope1 stats0027/cope1 stats0028/cope1 stats0029/cope1 stats0030/cope1 stats0031/cope1 stats0032/cope1 stats0033/cope1 stats0034/cope1 stats0035/cope1 stats0036/cope1 stats0037/cope1 stats0038/cope1 stats0039/cope1 stats0040/cope1 stats0041/cope1 stats0042/cope1 stats0043/cope1 stats0044/cope1
    924. 

  924. 

  925. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/global_prob_outlier1.nii.gz stats0000/global_prob_outlier1 stats0001/global_prob_outlier1 stats0002/global_prob_outlier1 stats0003/global_prob_outlier1 stats0004/global_prob_outlier1 stats0005/global_prob_outlier1 stats0006/global_prob_outlier1 stats0007/global_prob_outlier1 stats0008/global_prob_outlier1 stats0009/global_prob_outlier1 stats0010/global_prob_outlier1 stats0011/global_prob_outlier1 stats0012/global_prob_outlier1 stats0013/global_prob_outlier1 stats0014/global_prob_outlier1 stats0015/global_prob_outlier1 stats0016/global_prob_outlier1 stats0017/global_prob_outlier1 stats0018/global_prob_outlier1 stats0019/global_prob_outlier1 stats0020/global_prob_outlier1 stats0021/global_prob_outlier1 stats0022/global_prob_outlier1 stats0023/global_prob_outlier1 stats0024/global_prob_outlier1 stats0025/global_prob_outlier1 stats0026/global_prob_outlier1 stats0027/global_prob_outlier1 stats0028/global_prob_outlier1 stats0029/global_prob_outlier1 stats0030/global_prob_outlier1 stats0031/global_prob_outlier1 stats0032/global_prob_outlier1 stats0033/global_prob_outlier1 stats0034/global_prob_outlier1 stats0035/global_prob_outlier1 stats0036/global_prob_outlier1 stats0037/global_prob_outlier1 stats0038/global_prob_outlier1 stats0039/global_prob_outlier1 stats0040/global_prob_outlier1 stats0041/global_prob_outlier1 stats0042/global_prob_outlier1 stats0043/global_prob_outlier1 stats0044/global_prob_outlier1
    926. 

  926. 

  927. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/mask.nii.gz stats0000/mask stats0001/mask stats0002/mask stats0003/mask stats0004/mask stats0005/mask stats0006/mask stats0007/mask stats0008/mask stats0009/mask stats0010/mask stats0011/mask stats0012/mask stats0013/mask stats0014/mask stats0015/mask stats0016/mask stats0017/mask stats0018/mask stats0019/mask stats0020/mask stats0021/mask stats0022/mask stats0023/mask stats0024/mask stats0025/mask stats0026/mask stats0027/mask stats0028/mask stats0029/mask stats0030/mask stats0031/mask stats0032/mask stats0033/mask stats0034/mask stats0035/mask stats0036/mask stats0037/mask stats0038/mask stats0039/mask stats0040/mask stats0041/mask stats0042/mask stats0043/mask stats0044/mask
    928. 

  928. 

  929. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/mean_outlier_random_effects_var1.nii.gz stats0000/mean_outlier_random_effects_var1 stats0001/mean_outlier_random_effects_var1 stats0002/mean_outlier_random_effects_var1 stats0003/mean_outlier_random_effects_var1 stats0004/mean_outlier_random_effects_var1 stats0005/mean_outlier_random_effects_var1 stats0006/mean_outlier_random_effects_var1 stats0007/mean_outlier_random_effects_var1 stats0008/mean_outlier_random_effects_var1 stats0009/mean_outlier_random_effects_var1 stats0010/mean_outlier_random_effects_var1 stats0011/mean_outlier_random_effects_var1 stats0012/mean_outlier_random_effects_var1 stats0013/mean_outlier_random_effects_var1 stats0014/mean_outlier_random_effects_var1 stats0015/mean_outlier_random_effects_var1 stats0016/mean_outlier_random_effects_var1 stats0017/mean_outlier_random_effects_var1 stats0018/mean_outlier_random_effects_var1 stats0019/mean_outlier_random_effects_var1 stats0020/mean_outlier_random_effects_var1 stats0021/mean_outlier_random_effects_var1 stats0022/mean_outlier_random_effects_var1 stats0023/mean_outlier_random_effects_var1 stats0024/mean_outlier_random_effects_var1 stats0025/mean_outlier_random_effects_var1 stats0026/mean_outlier_random_effects_var1 stats0027/mean_outlier_random_effects_var1 stats0028/mean_outlier_random_effects_var1 stats0029/mean_outlier_random_effects_var1 stats0030/mean_outlier_random_effects_var1 stats0031/mean_outlier_random_effects_var1 stats0032/mean_outlier_random_effects_var1 stats0033/mean_outlier_random_effects_var1 stats0034/mean_outlier_random_effects_var1 stats0035/mean_outlier_random_effects_var1 stats0036/mean_outlier_random_effects_var1 stats0037/mean_outlier_random_effects_var1 stats0038/mean_outlier_random_effects_var1 stats0039/mean_outlier_random_effects_var1 stats0040/mean_outlier_random_effects_var1 stats0041/mean_outlier_random_effects_var1 stats0042/mean_outlier_random_effects_var1 stats0043/mean_outlier_random_effects_var1 stats0044/mean_outlier_random_effects_var1
    930. 

  930. 

  931. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/mean_random_effects_var1.nii.gz stats0000/mean_random_effects_var1 stats0001/mean_random_effects_var1 stats0002/mean_random_effects_var1 stats0003/mean_random_effects_var1 stats0004/mean_random_effects_var1 stats0005/mean_random_effects_var1 stats0006/mean_random_effects_var1 stats0007/mean_random_effects_var1 stats0008/mean_random_effects_var1 stats0009/mean_random_effects_var1 stats0010/mean_random_effects_var1 stats0011/mean_random_effects_var1 stats0012/mean_random_effects_var1 stats0013/mean_random_effects_var1 stats0014/mean_random_effects_var1 stats0015/mean_random_effects_var1 stats0016/mean_random_effects_var1 stats0017/mean_random_effects_var1 stats0018/mean_random_effects_var1 stats0019/mean_random_effects_var1 stats0020/mean_random_effects_var1 stats0021/mean_random_effects_var1 stats0022/mean_random_effects_var1 stats0023/mean_random_effects_var1 stats0024/mean_random_effects_var1 stats0025/mean_random_effects_var1 stats0026/mean_random_effects_var1 stats0027/mean_random_effects_var1 stats0028/mean_random_effects_var1 stats0029/mean_random_effects_var1 stats0030/mean_random_effects_var1 stats0031/mean_random_effects_var1 stats0032/mean_random_effects_var1 stats0033/mean_random_effects_var1 stats0034/mean_random_effects_var1 stats0035/mean_random_effects_var1 stats0036/mean_random_effects_var1 stats0037/mean_random_effects_var1 stats0038/mean_random_effects_var1 stats0039/mean_random_effects_var1 stats0040/mean_random_effects_var1 stats0041/mean_random_effects_var1 stats0042/mean_random_effects_var1 stats0043/mean_random_effects_var1 stats0044/mean_random_effects_var1
    932. 

  932. 

  933. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/pe1.nii.gz stats0000/pe1 stats0001/pe1 stats0002/pe1 stats0003/pe1 stats0004/pe1 stats0005/pe1 stats0006/pe1 stats0007/pe1 stats0008/pe1 stats0009/pe1 stats0010/pe1 stats0011/pe1 stats0012/pe1 stats0013/pe1 stats0014/pe1 stats0015/pe1 stats0016/pe1 stats0017/pe1 stats0018/pe1 stats0019/pe1 stats0020/pe1 stats0021/pe1 stats0022/pe1 stats0023/pe1 stats0024/pe1 stats0025/pe1 stats0026/pe1 stats0027/pe1 stats0028/pe1 stats0029/pe1 stats0030/pe1 stats0031/pe1 stats0032/pe1 stats0033/pe1 stats0034/pe1 stats0035/pe1 stats0036/pe1 stats0037/pe1 stats0038/pe1 stats0039/pe1 stats0040/pe1 stats0041/pe1 stats0042/pe1 stats0043/pe1 stats0044/pe1
    934. 

  934. 

  935. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/prob_outlier1.nii.gz stats0000/prob_outlier1 stats0001/prob_outlier1 stats0002/prob_outlier1 stats0003/prob_outlier1 stats0004/prob_outlier1 stats0005/prob_outlier1 stats0006/prob_outlier1 stats0007/prob_outlier1 stats0008/prob_outlier1 stats0009/prob_outlier1 stats0010/prob_outlier1 stats0011/prob_outlier1 stats0012/prob_outlier1 stats0013/prob_outlier1 stats0014/prob_outlier1 stats0015/prob_outlier1 stats0016/prob_outlier1 stats0017/prob_outlier1 stats0018/prob_outlier1 stats0019/prob_outlier1 stats0020/prob_outlier1 stats0021/prob_outlier1 stats0022/prob_outlier1 stats0023/prob_outlier1 stats0024/prob_outlier1 stats0025/prob_outlier1 stats0026/prob_outlier1 stats0027/prob_outlier1 stats0028/prob_outlier1 stats0029/prob_outlier1 stats0030/prob_outlier1 stats0031/prob_outlier1 stats0032/prob_outlier1 stats0033/prob_outlier1 stats0034/prob_outlier1 stats0035/prob_outlier1 stats0036/prob_outlier1 stats0037/prob_outlier1 stats0038/prob_outlier1 stats0039/prob_outlier1 stats0040/prob_outlier1 stats0041/prob_outlier1 stats0042/prob_outlier1 stats0043/prob_outlier1 stats0044/prob_outlier1
    936. 

  936. 

  937. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/res4d.nii.gz stats0000/res4d stats0001/res4d stats0002/res4d stats0003/res4d stats0004/res4d stats0005/res4d stats0006/res4d stats0007/res4d stats0008/res4d stats0009/res4d stats0010/res4d stats0011/res4d stats0012/res4d stats0013/res4d stats0014/res4d stats0015/res4d stats0016/res4d stats0017/res4d stats0018/res4d stats0019/res4d stats0020/res4d stats0021/res4d stats0022/res4d stats0023/res4d stats0024/res4d stats0025/res4d stats0026/res4d stats0027/res4d stats0028/res4d stats0029/res4d stats0030/res4d stats0031/res4d stats0032/res4d stats0033/res4d stats0034/res4d stats0035/res4d stats0036/res4d stats0037/res4d stats0038/res4d stats0039/res4d stats0040/res4d stats0041/res4d stats0042/res4d stats0043/res4d stats0044/res4d
    938. 

  938. 

  939. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/tdof_t1.nii.gz stats0000/tdof_t1 stats0001/tdof_t1 stats0002/tdof_t1 stats0003/tdof_t1 stats0004/tdof_t1 stats0005/tdof_t1 stats0006/tdof_t1 stats0007/tdof_t1 stats0008/tdof_t1 stats0009/tdof_t1 stats0010/tdof_t1 stats0011/tdof_t1 stats0012/tdof_t1 stats0013/tdof_t1 stats0014/tdof_t1 stats0015/tdof_t1 stats0016/tdof_t1 stats0017/tdof_t1 stats0018/tdof_t1 stats0019/tdof_t1 stats0020/tdof_t1 stats0021/tdof_t1 stats0022/tdof_t1 stats0023/tdof_t1 stats0024/tdof_t1 stats0025/tdof_t1 stats0026/tdof_t1 stats0027/tdof_t1 stats0028/tdof_t1 stats0029/tdof_t1 stats0030/tdof_t1 stats0031/tdof_t1 stats0032/tdof_t1 stats0033/tdof_t1 stats0034/tdof_t1 stats0035/tdof_t1 stats0036/tdof_t1 stats0037/tdof_t1 stats0038/tdof_t1 stats0039/tdof_t1 stats0040/tdof_t1 stats0041/tdof_t1 stats0042/tdof_t1 stats0043/tdof_t1 stats0044/tdof_t1
    940. 

  940. 

  941. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/tstat1.nii.gz stats0000/tstat1 stats0001/tstat1 stats0002/tstat1 stats0003/tstat1 stats0004/tstat1 stats0005/tstat1 stats0006/tstat1 stats0007/tstat1 stats0008/tstat1 stats0009/tstat1 stats0010/tstat1 stats0011/tstat1 stats0012/tstat1 stats0013/tstat1 stats0014/tstat1 stats0015/tstat1 stats0016/tstat1 stats0017/tstat1 stats0018/tstat1 stats0019/tstat1 stats0020/tstat1 stats0021/tstat1 stats0022/tstat1 stats0023/tstat1 stats0024/tstat1 stats0025/tstat1 stats0026/tstat1 stats0027/tstat1 stats0028/tstat1 stats0029/tstat1 stats0030/tstat1 stats0031/tstat1 stats0032/tstat1 stats0033/tstat1 stats0034/tstat1 stats0035/tstat1 stats0036/tstat1 stats0037/tstat1 stats0038/tstat1 stats0039/tstat1 stats0040/tstat1 stats0041/tstat1 stats0042/tstat1 stats0043/tstat1 stats0044/tstat1
    942. 

  942. 

  943. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/varcope1.nii.gz stats0000/varcope1 stats0001/varcope1 stats0002/varcope1 stats0003/varcope1 stats0004/varcope1 stats0005/varcope1 stats0006/varcope1 stats0007/varcope1 stats0008/varcope1 stats0009/varcope1 stats0010/varcope1 stats0011/varcope1 stats0012/varcope1 stats0013/varcope1 stats0014/varcope1 stats0015/varcope1 stats0016/varcope1 stats0017/varcope1 stats0018/varcope1 stats0019/varcope1 stats0020/varcope1 stats0021/varcope1 stats0022/varcope1 stats0023/varcope1 stats0024/varcope1 stats0025/varcope1 stats0026/varcope1 stats0027/varcope1 stats0028/varcope1 stats0029/varcope1 stats0030/varcope1 stats0031/varcope1 stats0032/varcope1 stats0033/varcope1 stats0034/varcope1 stats0035/varcope1 stats0036/varcope1 stats0037/varcope1 stats0038/varcope1 stats0039/varcope1 stats0040/varcope1 stats0041/varcope1 stats0042/varcope1 stats0043/varcope1 stats0044/varcope1
    944. 

  944. 

  945. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/weights1.nii.gz stats0000/weights1 stats0001/weights1 stats0002/weights1 stats0003/weights1 stats0004/weights1 stats0005/weights1 stats0006/weights1 stats0007/weights1 stats0008/weights1 stats0009/weights1 stats0010/weights1 stats0011/weights1 stats0012/weights1 stats0013/weights1 stats0014/weights1 stats0015/weights1 stats0016/weights1 stats0017/weights1 stats0018/weights1 stats0019/weights1 stats0020/weights1 stats0021/weights1 stats0022/weights1 stats0023/weights1 stats0024/weights1 stats0025/weights1 stats0026/weights1 stats0027/weights1 stats0028/weights1 stats0029/weights1 stats0030/weights1 stats0031/weights1 stats0032/weights1 stats0033/weights1 stats0034/weights1 stats0035/weights1 stats0036/weights1 stats0037/weights1 stats0038/weights1 stats0039/weights1 stats0040/weights1 stats0041/weights1 stats0042/weights1 stats0043/weights1 stats0044/weights1
    946. 

  946. 

  947. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/zflame1lowertstat1.nii.gz stats0000/zflame1lowertstat1 stats0001/zflame1lowertstat1 stats0002/zflame1lowertstat1 stats0003/zflame1lowertstat1 stats0004/zflame1lowertstat1 stats0005/zflame1lowertstat1 stats0006/zflame1lowertstat1 stats0007/zflame1lowertstat1 stats0008/zflame1lowertstat1 stats0009/zflame1lowertstat1 stats0010/zflame1lowertstat1 stats0011/zflame1lowertstat1 stats0012/zflame1lowertstat1 stats0013/zflame1lowertstat1 stats0014/zflame1lowertstat1 stats0015/zflame1lowertstat1 stats0016/zflame1lowertstat1 stats0017/zflame1lowertstat1 stats0018/zflame1lowertstat1 stats0019/zflame1lowertstat1 stats0020/zflame1lowertstat1 stats0021/zflame1lowertstat1 stats0022/zflame1lowertstat1 stats0023/zflame1lowertstat1 stats0024/zflame1lowertstat1 stats0025/zflame1lowertstat1 stats0026/zflame1lowertstat1 stats0027/zflame1lowertstat1 stats0028/zflame1lowertstat1 stats0029/zflame1lowertstat1 stats0030/zflame1lowertstat1 stats0031/zflame1lowertstat1 stats0032/zflame1lowertstat1 stats0033/zflame1lowertstat1 stats0034/zflame1lowertstat1 stats0035/zflame1lowertstat1 stats0036/zflame1lowertstat1 stats0037/zflame1lowertstat1 stats0038/zflame1lowertstat1 stats0039/zflame1lowertstat1 stats0040/zflame1lowertstat1 stats0041/zflame1lowertstat1 stats0042/zflame1lowertstat1 stats0043/zflame1lowertstat1 stats0044/zflame1lowertstat1
    948. 

  948. 

  949. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/zflame1uppertstat1.nii.gz stats0000/zflame1uppertstat1 stats0001/zflame1uppertstat1 stats0002/zflame1uppertstat1 stats0003/zflame1uppertstat1 stats0004/zflame1uppertstat1 stats0005/zflame1uppertstat1 stats0006/zflame1uppertstat1 stats0007/zflame1uppertstat1 stats0008/zflame1uppertstat1 stats0009/zflame1uppertstat1 stats0010/zflame1uppertstat1 stats0011/zflame1uppertstat1 stats0012/zflame1uppertstat1 stats0013/zflame1uppertstat1 stats0014/zflame1uppertstat1 stats0015/zflame1uppertstat1 stats0016/zflame1uppertstat1 stats0017/zflame1uppertstat1 stats0018/zflame1uppertstat1 stats0019/zflame1uppertstat1 stats0020/zflame1uppertstat1 stats0021/zflame1uppertstat1 stats0022/zflame1uppertstat1 stats0023/zflame1uppertstat1 stats0024/zflame1uppertstat1 stats0025/zflame1uppertstat1 stats0026/zflame1uppertstat1 stats0027/zflame1uppertstat1 stats0028/zflame1uppertstat1 stats0029/zflame1uppertstat1 stats0030/zflame1uppertstat1 stats0031/zflame1uppertstat1 stats0032/zflame1uppertstat1 stats0033/zflame1uppertstat1 stats0034/zflame1uppertstat1 stats0035/zflame1uppertstat1 stats0036/zflame1uppertstat1 stats0037/zflame1uppertstat1 stats0038/zflame1uppertstat1 stats0039/zflame1uppertstat1 stats0040/zflame1uppertstat1 stats0041/zflame1uppertstat1 stats0042/zflame1uppertstat1 stats0043/zflame1uppertstat1 stats0044/zflame1uppertstat1
    950. 

  950. 

  951. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/zstat1.nii.gz stats0000/zstat1 stats0001/zstat1 stats0002/zstat1 stats0003/zstat1 stats0004/zstat1 stats0005/zstat1 stats0006/zstat1 stats0007/zstat1 stats0008/zstat1 stats0009/zstat1 stats0010/zstat1 stats0011/zstat1 stats0012/zstat1 stats0013/zstat1 stats0014/zstat1 stats0015/zstat1 stats0016/zstat1 stats0017/zstat1 stats0018/zstat1 stats0019/zstat1 stats0020/zstat1 stats0021/zstat1 stats0022/zstat1 stats0023/zstat1 stats0024/zstat1 stats0025/zstat1 stats0026/zstat1 stats0027/zstat1 stats0028/zstat1 stats0029/zstat1 stats0030/zstat1 stats0031/zstat1 stats0032/zstat1 stats0033/zstat1 stats0034/zstat1 stats0035/zstat1 stats0036/zstat1 stats0037/zstat1 stats0038/zstat1 stats0039/zstat1 stats0040/zstat1 stats0041/zstat1 stats0042/zstat1 stats0043/zstat1 stats0044/zstat1
    952. 

  952. 

  953. /bin/mv stats0000 stats ; /bin/rm -rf stats?* tmp*
    954. 

  954. 

  955. /bin/rm -f stats/zem* stats/zols* stats/mask* ; /bin/mv dof stats
    956. 

  956. 

  957. /usr/share/fsl/5.0/bin/smoothest -d 3 -m mask -r stats/res4d > stats/smoothness
    958. 

  958. </pre><hr>Post-stats<br><pre>
    959. 

  959. 

  960. /usr/share/fsl/5.0/bin/fslmaths stats/zstat1 -mas mask thresh_zstat1
    961. 

  961. 

  962. echo 112236 > thresh_zstat1.vol
    963. 

  963. zstat1: DLH=0.48014 VOLUME=112236 RESELS=10.5768
    964. 

  964. 

  965. /usr/share/fsl/5.0/bin/cluster -i thresh_zstat1 -c stats/cope1 -t 1.64 -p 0.05 -d 0.48014 --volume=112236 --othresh=thresh_zstat1 -o cluster_mask_zstat1 --connectivity=26 --mm --olmax=lmax_zstat1_std.txt --scalarname=Z > cluster_zstat1_std.txt
    966. 

  966. 

  967. /usr/share/fsl/5.0/bin/cluster2html . cluster_zstat1 -std
    968. 

  968. 

  969. /usr/share/fsl/5.0/bin/fslstats thresh_zstat1 -l 0.0001 -R 2>/dev/null
    970. 

  970. 1.640221 3.542004 
    971. 

  971. Rendering using zmin=1.640221 zmax=3.542004
    972. 

  972. 

  973. /usr/share/fsl/5.0/bin/overlay 1 0 example_func -a thresh_zstat1 1.640221 3.542004 rendered_thresh_zstat1
    974. 

  974. 

  975. /usr/share/fsl/5.0/bin/slicer rendered_thresh_zstat1 -S 2 750 rendered_thresh_zstat1.png
    976. 

  976. 

  977. /bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif
    978. 

  978. </pre><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br></BODY></HTML>
    979.