Scheduled service maintenance on November 22


On Friday, November 22, 2024, between 06:00 CET and 18:00 CET, GIN services will undergo planned maintenance. Extended service interruptions should be expected. We will try to keep downtimes to a minimum, but recommend that users avoid critical tasks, large data uploads, or DOI requests during this time.

We apologize for any inconvenience.

report_log.html 47 KB

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  1. <HTML><HEAD>
  2. <!--refreshstart-->
  3. <!--refreshstop-->
  4. <link REL=stylesheet TYPE=text/css href=.files/fsl.css>
  5. <TITLE>FSL</TITLE></HEAD><BODY><OBJECT data=report.html></OBJECT>
  6. <h2>Progress Report / Log</h2>
  7. Started at Tue Mar 22 14:08:31 CET 2016<p>
  8. <pre>
  9. cp -r ../.files .files
  10. </pre><hr>Higher-level stats<br><pre>
  11. cat ../design.lcon | awk '{ print }' > design.lcon
  12. /usr/share/fsl/5.0/bin/fslsplit mask tmpmask -z
  13. /usr/share/fsl/5.0/bin/fslsplit filtered_func_data tmpcope -z
  14. /usr/share/fsl/5.0/bin/fslsplit var_filtered_func_data tmpvarcope -z
  15. /usr/share/fsl/5.0/bin/flameo --cope=tmpcope0000 --vc=tmpvarcope0000 --mask=tmpmask0000 --ld=stats0000 --dm=design.mat --cs=design.grp --tc=design.con --io --runmode=flame1
  16. Log directory is: stats0000
  17. Setting up:
  18. ntptsing=4.000000
  19. evs_group=1.000000
  20. No f contrasts
  21. WARNING: The passed in varcope file, tmpvarcope0000, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  22. nevs=1
  23. ntpts=4
  24. ngs=1
  25. nvoxels=0
  26. Running:
  27. nmaskvoxels=0
  28. nmaskvoxels=0
  29. Saving results
  30. Log directory was: stats0000
  31. Log directory is: stats0009
  32. Setting up:
  33. ntptsing=4.000000
  34. evs_group=1.000000
  35. No f contrasts
  36. WARNING: The passed in varcope file, tmpvarcope0009, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  37. nevs=1
  38. ntpts=4
  39. ngs=1
  40. nvoxels=2101
  41. Running:
  42. nmaskvoxels=2101
  43. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  44. nmaskvoxels=2101
  45. Saving results
  46. Log directory was: stats0009
  47. Log directory is: stats0010
  48. Setting up:
  49. ntptsing=4.000000
  50. evs_group=1.000000
  51. No f contrasts
  52. WARNING: The passed in varcope file, tmpvarcope0010, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  53. nevs=1
  54. ntpts=4
  55. ngs=1
  56. nvoxels=2158
  57. Running:
  58. nmaskvoxels=2158
  59. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  60. nmaskvoxels=2158
  61. Saving results
  62. Log directory was: stats0010
  63. Log directory is: stats0011
  64. Setting up:
  65. ntptsing=4.000000
  66. evs_group=1.000000
  67. No f contrasts
  68. WARNING: The passed in varcope file, tmpvarcope0011, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  69. nevs=1
  70. ntpts=4
  71. ngs=1
  72. nvoxels=2199
  73. Running:
  74. nmaskvoxels=2199
  75. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  76. nmaskvoxels=2199
  77. Saving results
  78. Log directory was: stats0011
  79. Log directory is: stats0012
  80. Setting up:
  81. ntptsing=4.000000
  82. evs_group=1.000000
  83. No f contrasts
  84. WARNING: The passed in varcope file, tmpvarcope0012, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  85. nevs=1
  86. ntpts=4
  87. ngs=1
  88. nvoxels=2277
  89. Running:
  90. nmaskvoxels=2277
  91. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  92. nmaskvoxels=2277
  93. Saving results
  94. Log directory was: stats0012
  95. Log directory is: stats0013
  96. Setting up:
  97. ntptsing=4.000000
  98. evs_group=1.000000
  99. No f contrasts
  100. WARNING: The passed in varcope file, tmpvarcope0013, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  101. nevs=1
  102. ntpts=4
  103. ngs=1
  104. nvoxels=2380
  105. Running:
  106. nmaskvoxels=2380
  107. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  108. nmaskvoxels=2380
  109. Saving results
  110. Log directory was: stats0013
  111. Log directory is: stats0014
  112. Setting up:
  113. ntptsing=4.000000
  114. evs_group=1.000000
  115. No f contrasts
  116. WARNING: The passed in varcope file, tmpvarcope0014, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  117. nevs=1
  118. ntpts=4
  119. ngs=1
  120. nvoxels=2530
  121. Running:
  122. nmaskvoxels=2530
  123. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  124. nmaskvoxels=2530
  125. Saving results
  126. Log directory was: stats0014
  127. Log directory is: stats0015
  128. Setting up:
  129. ntptsing=4.000000
  130. evs_group=1.000000
  131. No f contrasts
  132. WARNING: The passed in varcope file, tmpvarcope0015, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  133. nevs=1
  134. ntpts=4
  135. ngs=1
  136. nvoxels=2684
  137. Running:
  138. nmaskvoxels=2684
  139. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  140. nmaskvoxels=2684
  141. Saving results
  142. Log directory was: stats0015
  143. Log directory is: stats0016
  144. Setting up:
  145. ntptsing=4.000000
  146. evs_group=1.000000
  147. No f contrasts
  148. WARNING: The passed in varcope file, tmpvarcope0016, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  149. nevs=1
  150. ntpts=4
  151. ngs=1
  152. nvoxels=2763
  153. Running:
  154. nmaskvoxels=2763
  155. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  156. nmaskvoxels=2763
  157. Saving results
  158. Log directory was: stats0016
  159. Log directory is: stats0017
  160. Setting up:
  161. ntptsing=4.000000
  162. evs_group=1.000000
  163. No f contrasts
  164. WARNING: The passed in varcope file, tmpvarcope0017, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  165. nevs=1
  166. ntpts=4
  167. ngs=1
  168. nvoxels=2810
  169. Running:
  170. nmaskvoxels=2810
  171. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  172. nmaskvoxels=2810
  173. Saving results
  174. Log directory was: stats0017
  175. Log directory is: stats0018
  176. Setting up:
  177. ntptsing=4.000000
  178. evs_group=1.000000
  179. No f contrasts
  180. WARNING: The passed in varcope file, tmpvarcope0018, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  181. nevs=1
  182. ntpts=4
  183. ngs=1
  184. nvoxels=2858
  185. Running:
  186. nmaskvoxels=2858
  187. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  188. nmaskvoxels=2858
  189. Saving results
  190. Log directory was: stats0018
  191. Log directory is: stats0001
  192. Setting up:
  193. ntptsing=4.000000
  194. evs_group=1.000000
  195. No f contrasts
  196. WARNING: The passed in varcope file, tmpvarcope0001, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  197. nevs=1
  198. ntpts=4
  199. ngs=1
  200. nvoxels=856
  201. Running:
  202. nmaskvoxels=856
  203. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  204. nmaskvoxels=856
  205. Saving results
  206. Log directory was: stats0001
  207. Log directory is: stats0019
  208. Setting up:
  209. ntptsing=4.000000
  210. evs_group=1.000000
  211. No f contrasts
  212. WARNING: The passed in varcope file, tmpvarcope0019, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  213. nevs=1
  214. ntpts=4
  215. ngs=1
  216. nvoxels=2881
  217. Running:
  218. nmaskvoxels=2881
  219. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  220. nmaskvoxels=2881
  221. Saving results
  222. Log directory was: stats0019
  223. Log directory is: stats0020
  224. Setting up:
  225. ntptsing=4.000000
  226. evs_group=1.000000
  227. No f contrasts
  228. WARNING: The passed in varcope file, tmpvarcope0020, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  229. nevs=1
  230. ntpts=4
  231. ngs=1
  232. nvoxels=2880
  233. Running:
  234. nmaskvoxels=2880
  235. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  236. nmaskvoxels=2880
  237. Saving results
  238. Log directory was: stats0020
  239. Log directory is: stats0021
  240. Setting up:
  241. ntptsing=4.000000
  242. evs_group=1.000000
  243. No f contrasts
  244. WARNING: The passed in varcope file, tmpvarcope0021, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  245. nevs=1
  246. ntpts=4
  247. ngs=1
  248. nvoxels=2861
  249. Running:
  250. nmaskvoxels=2861
  251. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  252. nmaskvoxels=2861
  253. Saving results
  254. Log directory was: stats0021
  255. Log directory is: stats0022
  256. Setting up:
  257. ntptsing=4.000000
  258. evs_group=1.000000
  259. No f contrasts
  260. WARNING: The passed in varcope file, tmpvarcope0022, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  261. nevs=1
  262. ntpts=4
  263. ngs=1
  264. nvoxels=2850
  265. Running:
  266. nmaskvoxels=2850
  267. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  268. nmaskvoxels=2850
  269. Saving results
  270. Log directory was: stats0022
  271. Log directory is: stats0023
  272. Setting up:
  273. ntptsing=4.000000
  274. evs_group=1.000000
  275. No f contrasts
  276. WARNING: The passed in varcope file, tmpvarcope0023, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  277. nevs=1
  278. ntpts=4
  279. ngs=1
  280. nvoxels=2835
  281. Running:
  282. nmaskvoxels=2835
  283. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  284. nmaskvoxels=2835
  285. Saving results
  286. Log directory was: stats0023
  287. Log directory is: stats0024
  288. Setting up:
  289. ntptsing=4.000000
  290. evs_group=1.000000
  291. No f contrasts
  292. WARNING: The passed in varcope file, tmpvarcope0024, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  293. nevs=1
  294. ntpts=4
  295. ngs=1
  296. nvoxels=2797
  297. Running:
  298. nmaskvoxels=2797
  299. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  300. nmaskvoxels=2797
  301. Saving results
  302. Log directory was: stats0024
  303. Log directory is: stats0025
  304. Setting up:
  305. ntptsing=4.000000
  306. evs_group=1.000000
  307. No f contrasts
  308. WARNING: The passed in varcope file, tmpvarcope0025, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  309. nevs=1
  310. ntpts=4
  311. ngs=1
  312. nvoxels=2742
  313. Running:
  314. nmaskvoxels=2742
  315. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  316. nmaskvoxels=2742
  317. Saving results
  318. Log directory was: stats0025
  319. Log directory is: stats0026
  320. Setting up:
  321. ntptsing=4.000000
  322. evs_group=1.000000
  323. No f contrasts
  324. WARNING: The passed in varcope file, tmpvarcope0026, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  325. nevs=1
  326. ntpts=4
  327. ngs=1
  328. nvoxels=2694
  329. Running:
  330. nmaskvoxels=2694
  331. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  332. nmaskvoxels=2694
  333. Saving results
  334. Log directory was: stats0026
  335. Log directory is: stats0027
  336. Setting up:
  337. ntptsing=4.000000
  338. evs_group=1.000000
  339. No f contrasts
  340. WARNING: The passed in varcope file, tmpvarcope0027, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  341. nevs=1
  342. ntpts=4
  343. ngs=1
  344. nvoxels=2606
  345. Running:
  346. nmaskvoxels=2606
  347. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  348. nmaskvoxels=2606
  349. Saving results
  350. Log directory was: stats0027
  351. Log directory is: stats0028
  352. Setting up:
  353. ntptsing=4.000000
  354. evs_group=1.000000
  355. No f contrasts
  356. WARNING: The passed in varcope file, tmpvarcope0028, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  357. nevs=1
  358. ntpts=4
  359. ngs=1
  360. nvoxels=2503
  361. Running:
  362. nmaskvoxels=2503
  363. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  364. nmaskvoxels=2503
  365. Saving results
  366. Log directory was: stats0028
  367. Log directory is: stats0002
  368. Setting up:
  369. ntptsing=4.000000
  370. evs_group=1.000000
  371. No f contrasts
  372. WARNING: The passed in varcope file, tmpvarcope0002, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  373. nevs=1
  374. ntpts=4
  375. ngs=1
  376. nvoxels=1104
  377. Running:
  378. nmaskvoxels=1104
  379. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  380. nmaskvoxels=1104
  381. Saving results
  382. Log directory was: stats0002
  383. Log directory is: stats0029
  384. Setting up:
  385. ntptsing=4.000000
  386. evs_group=1.000000
  387. No f contrasts
  388. WARNING: The passed in varcope file, tmpvarcope0029, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  389. nevs=1
  390. ntpts=4
  391. ngs=1
  392. nvoxels=2395
  393. Running:
  394. nmaskvoxels=2395
  395. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  396. nmaskvoxels=2395
  397. Saving results
  398. Log directory was: stats0029
  399. Log directory is: stats0030
  400. Setting up:
  401. ntptsing=4.000000
  402. evs_group=1.000000
  403. No f contrasts
  404. WARNING: The passed in varcope file, tmpvarcope0030, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  405. nevs=1
  406. ntpts=4
  407. ngs=1
  408. nvoxels=2255
  409. Running:
  410. nmaskvoxels=2255
  411. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  412. nmaskvoxels=2255
  413. Saving results
  414. Log directory was: stats0030
  415. Log directory is: stats0031
  416. Setting up:
  417. ntptsing=4.000000
  418. evs_group=1.000000
  419. No f contrasts
  420. WARNING: The passed in varcope file, tmpvarcope0031, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  421. nevs=1
  422. ntpts=4
  423. ngs=1
  424. nvoxels=2140
  425. Running:
  426. nmaskvoxels=2140
  427. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  428. nmaskvoxels=2140
  429. Saving results
  430. Log directory was: stats0031
  431. Log directory is: stats0032
  432. Setting up:
  433. ntptsing=4.000000
  434. evs_group=1.000000
  435. No f contrasts
  436. WARNING: The passed in varcope file, tmpvarcope0032, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  437. nevs=1
  438. ntpts=4
  439. ngs=1
  440. nvoxels=2006
  441. Running:
  442. nmaskvoxels=2006
  443. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  444. nmaskvoxels=2006
  445. Saving results
  446. Log directory was: stats0032
  447. Log directory is: stats0033
  448. Setting up:
  449. ntptsing=4.000000
  450. evs_group=1.000000
  451. No f contrasts
  452. WARNING: The passed in varcope file, tmpvarcope0033, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  453. nevs=1
  454. ntpts=4
  455. ngs=1
  456. nvoxels=1851
  457. Running:
  458. nmaskvoxels=1851
  459. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  460. nmaskvoxels=1851
  461. Saving results
  462. Log directory was: stats0033
  463. Log directory is: stats0034
  464. Setting up:
  465. ntptsing=4.000000
  466. evs_group=1.000000
  467. No f contrasts
  468. WARNING: The passed in varcope file, tmpvarcope0034, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  469. nevs=1
  470. ntpts=4
  471. ngs=1
  472. nvoxels=1705
  473. Running:
  474. nmaskvoxels=1705
  475. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  476. nmaskvoxels=1705
  477. Saving results
  478. Log directory was: stats0034
  479. Log directory is: stats0035
  480. Setting up:
  481. ntptsing=4.000000
  482. evs_group=1.000000
  483. No f contrasts
  484. WARNING: The passed in varcope file, tmpvarcope0035, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  485. nevs=1
  486. ntpts=4
  487. ngs=1
  488. nvoxels=1570
  489. Running:
  490. nmaskvoxels=1570
  491. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  492. nmaskvoxels=1570
  493. Saving results
  494. Log directory was: stats0035
  495. Log directory is: stats0036
  496. Setting up:
  497. ntptsing=4.000000
  498. evs_group=1.000000
  499. No f contrasts
  500. WARNING: The passed in varcope file, tmpvarcope0036, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  501. nevs=1
  502. ntpts=4
  503. ngs=1
  504. nvoxels=1394
  505. Running:
  506. nmaskvoxels=1394
  507. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  508. nmaskvoxels=1394
  509. Saving results
  510. Log directory was: stats0036
  511. Log directory is: stats0037
  512. Setting up:
  513. ntptsing=4.000000
  514. evs_group=1.000000
  515. No f contrasts
  516. WARNING: The passed in varcope file, tmpvarcope0037, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  517. nevs=1
  518. ntpts=4
  519. ngs=1
  520. nvoxels=1252
  521. Running:
  522. nmaskvoxels=1252
  523. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  524. nmaskvoxels=1252
  525. Saving results
  526. Log directory was: stats0037
  527. Log directory is: stats0038
  528. Setting up:
  529. ntptsing=4.000000
  530. evs_group=1.000000
  531. No f contrasts
  532. WARNING: The passed in varcope file, tmpvarcope0038, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  533. nevs=1
  534. ntpts=4
  535. ngs=1
  536. nvoxels=1075
  537. Running:
  538. nmaskvoxels=1075
  539. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  540. nmaskvoxels=1075
  541. Saving results
  542. Log directory was: stats0038
  543. Log directory is: stats0003
  544. Setting up:
  545. ntptsing=4.000000
  546. evs_group=1.000000
  547. No f contrasts
  548. WARNING: The passed in varcope file, tmpvarcope0003, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  549. nevs=1
  550. ntpts=4
  551. ngs=1
  552. nvoxels=1226
  553. Running:
  554. nmaskvoxels=1226
  555. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  556. nmaskvoxels=1226
  557. Saving results
  558. Log directory was: stats0003
  559. Log directory is: stats0039
  560. Setting up:
  561. ntptsing=4.000000
  562. evs_group=1.000000
  563. No f contrasts
  564. WARNING: The passed in varcope file, tmpvarcope0039, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  565. nevs=1
  566. ntpts=4
  567. ngs=1
  568. nvoxels=906
  569. Running:
  570. nmaskvoxels=906
  571. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  572. nmaskvoxels=906
  573. Saving results
  574. Log directory was: stats0039
  575. Log directory is: stats0040
  576. Setting up:
  577. ntptsing=4.000000
  578. evs_group=1.000000
  579. No f contrasts
  580. WARNING: The passed in varcope file, tmpvarcope0040, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  581. nevs=1
  582. ntpts=4
  583. ngs=1
  584. nvoxels=724
  585. Running:
  586. nmaskvoxels=724
  587. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  588. nmaskvoxels=724
  589. Saving results
  590. Log directory was: stats0040
  591. Log directory is: stats0041
  592. Setting up:
  593. ntptsing=4.000000
  594. evs_group=1.000000
  595. No f contrasts
  596. WARNING: The passed in varcope file, tmpvarcope0041, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  597. nevs=1
  598. ntpts=4
  599. ngs=1
  600. nvoxels=538
  601. Running:
  602. nmaskvoxels=538
  603. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  604. nmaskvoxels=538
  605. Saving results
  606. Log directory was: stats0041
  607. Log directory is: stats0042
  608. Setting up:
  609. ntptsing=4.000000
  610. evs_group=1.000000
  611. No f contrasts
  612. WARNING: The passed in varcope file, tmpvarcope0042, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  613. nevs=1
  614. ntpts=4
  615. ngs=1
  616. nvoxels=341
  617. Running:
  618. nmaskvoxels=341
  619. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  620. nmaskvoxels=341
  621. Saving results
  622. Log directory was: stats0042
  623. Log directory is: stats0043
  624. Setting up:
  625. ntptsing=4.000000
  626. evs_group=1.000000
  627. No f contrasts
  628. WARNING: The passed in varcope file, tmpvarcope0043, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  629. nevs=1
  630. ntpts=4
  631. ngs=1
  632. nvoxels=197
  633. Running:
  634. nmaskvoxels=197
  635. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  636. nmaskvoxels=197
  637. Saving results
  638. Log directory was: stats0043
  639. Log directory is: stats0044
  640. Setting up:
  641. ntptsing=4.000000
  642. evs_group=1.000000
  643. No f contrasts
  644. WARNING: The passed in varcope file, tmpvarcope0044, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  645. nevs=1
  646. ntpts=4
  647. ngs=1
  648. nvoxels=91
  649. Running:
  650. nmaskvoxels=91
  651. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91
  652. nmaskvoxels=91
  653. Saving results
  654. Log directory was: stats0044
  655. Log directory is: stats0004
  656. Setting up:
  657. ntptsing=4.000000
  658. evs_group=1.000000
  659. No f contrasts
  660. WARNING: The passed in varcope file, tmpvarcope0004, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  661. nevs=1
  662. ntpts=4
  663. ngs=1
  664. nvoxels=1371
  665. Running:
  666. nmaskvoxels=1371
  667. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  668. nmaskvoxels=1371
  669. Saving results
  670. Log directory was: stats0004
  671. Log directory is: stats0005
  672. Setting up:
  673. ntptsing=4.000000
  674. evs_group=1.000000
  675. No f contrasts
  676. WARNING: The passed in varcope file, tmpvarcope0005, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  677. nevs=1
  678. ntpts=4
  679. ngs=1
  680. nvoxels=1562
  681. Running:
  682. nmaskvoxels=1562
  683. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  684. nmaskvoxels=1562
  685. Saving results
  686. Log directory was: stats0005
  687. Log directory is: stats0006
  688. Setting up:
  689. ntptsing=4.000000
  690. evs_group=1.000000
  691. No f contrasts
  692. WARNING: The passed in varcope file, tmpvarcope0006, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  693. nevs=1
  694. ntpts=4
  695. ngs=1
  696. nvoxels=1735
  697. Running:
  698. nmaskvoxels=1735
  699. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  700. nmaskvoxels=1735
  701. Saving results
  702. Log directory was: stats0006
  703. Log directory is: stats0007
  704. Setting up:
  705. ntptsing=4.000000
  706. evs_group=1.000000
  707. No f contrasts
  708. WARNING: The passed in varcope file, tmpvarcope0007, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  709. nevs=1
  710. ntpts=4
  711. ngs=1
  712. nvoxels=1903
  713. Running:
  714. nmaskvoxels=1903
  715. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  716. nmaskvoxels=1903
  717. Saving results
  718. Log directory was: stats0007
  719. Log directory is: stats0008
  720. Setting up:
  721. ntptsing=4.000000
  722. evs_group=1.000000
  723. No f contrasts
  724. WARNING: The passed in varcope file, tmpvarcope0008, contains voxels inside the mask with zero (or negative) values. These voxels will be excluded from the analysis.
  725. nevs=1
  726. ntpts=4
  727. ngs=1
  728. nvoxels=2014
  729. Running:
  730. nmaskvoxels=2014
  731. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100
  732. nmaskvoxels=2014
  733. Saving results
  734. Log directory was: stats0008
  735. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/cope1.nii.gz stats0000/cope1 stats0001/cope1 stats0002/cope1 stats0003/cope1 stats0004/cope1 stats0005/cope1 stats0006/cope1 stats0007/cope1 stats0008/cope1 stats0009/cope1 stats0010/cope1 stats0011/cope1 stats0012/cope1 stats0013/cope1 stats0014/cope1 stats0015/cope1 stats0016/cope1 stats0017/cope1 stats0018/cope1 stats0019/cope1 stats0020/cope1 stats0021/cope1 stats0022/cope1 stats0023/cope1 stats0024/cope1 stats0025/cope1 stats0026/cope1 stats0027/cope1 stats0028/cope1 stats0029/cope1 stats0030/cope1 stats0031/cope1 stats0032/cope1 stats0033/cope1 stats0034/cope1 stats0035/cope1 stats0036/cope1 stats0037/cope1 stats0038/cope1 stats0039/cope1 stats0040/cope1 stats0041/cope1 stats0042/cope1 stats0043/cope1 stats0044/cope1
  736. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/global_prob_outlier1.nii.gz stats0000/global_prob_outlier1 stats0001/global_prob_outlier1 stats0002/global_prob_outlier1 stats0003/global_prob_outlier1 stats0004/global_prob_outlier1 stats0005/global_prob_outlier1 stats0006/global_prob_outlier1 stats0007/global_prob_outlier1 stats0008/global_prob_outlier1 stats0009/global_prob_outlier1 stats0010/global_prob_outlier1 stats0011/global_prob_outlier1 stats0012/global_prob_outlier1 stats0013/global_prob_outlier1 stats0014/global_prob_outlier1 stats0015/global_prob_outlier1 stats0016/global_prob_outlier1 stats0017/global_prob_outlier1 stats0018/global_prob_outlier1 stats0019/global_prob_outlier1 stats0020/global_prob_outlier1 stats0021/global_prob_outlier1 stats0022/global_prob_outlier1 stats0023/global_prob_outlier1 stats0024/global_prob_outlier1 stats0025/global_prob_outlier1 stats0026/global_prob_outlier1 stats0027/global_prob_outlier1 stats0028/global_prob_outlier1 stats0029/global_prob_outlier1 stats0030/global_prob_outlier1 stats0031/global_prob_outlier1 stats0032/global_prob_outlier1 stats0033/global_prob_outlier1 stats0034/global_prob_outlier1 stats0035/global_prob_outlier1 stats0036/global_prob_outlier1 stats0037/global_prob_outlier1 stats0038/global_prob_outlier1 stats0039/global_prob_outlier1 stats0040/global_prob_outlier1 stats0041/global_prob_outlier1 stats0042/global_prob_outlier1 stats0043/global_prob_outlier1 stats0044/global_prob_outlier1
  737. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/mask.nii.gz stats0000/mask stats0001/mask stats0002/mask stats0003/mask stats0004/mask stats0005/mask stats0006/mask stats0007/mask stats0008/mask stats0009/mask stats0010/mask stats0011/mask stats0012/mask stats0013/mask stats0014/mask stats0015/mask stats0016/mask stats0017/mask stats0018/mask stats0019/mask stats0020/mask stats0021/mask stats0022/mask stats0023/mask stats0024/mask stats0025/mask stats0026/mask stats0027/mask stats0028/mask stats0029/mask stats0030/mask stats0031/mask stats0032/mask stats0033/mask stats0034/mask stats0035/mask stats0036/mask stats0037/mask stats0038/mask stats0039/mask stats0040/mask stats0041/mask stats0042/mask stats0043/mask stats0044/mask
  738. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/mean_outlier_random_effects_var1.nii.gz stats0000/mean_outlier_random_effects_var1 stats0001/mean_outlier_random_effects_var1 stats0002/mean_outlier_random_effects_var1 stats0003/mean_outlier_random_effects_var1 stats0004/mean_outlier_random_effects_var1 stats0005/mean_outlier_random_effects_var1 stats0006/mean_outlier_random_effects_var1 stats0007/mean_outlier_random_effects_var1 stats0008/mean_outlier_random_effects_var1 stats0009/mean_outlier_random_effects_var1 stats0010/mean_outlier_random_effects_var1 stats0011/mean_outlier_random_effects_var1 stats0012/mean_outlier_random_effects_var1 stats0013/mean_outlier_random_effects_var1 stats0014/mean_outlier_random_effects_var1 stats0015/mean_outlier_random_effects_var1 stats0016/mean_outlier_random_effects_var1 stats0017/mean_outlier_random_effects_var1 stats0018/mean_outlier_random_effects_var1 stats0019/mean_outlier_random_effects_var1 stats0020/mean_outlier_random_effects_var1 stats0021/mean_outlier_random_effects_var1 stats0022/mean_outlier_random_effects_var1 stats0023/mean_outlier_random_effects_var1 stats0024/mean_outlier_random_effects_var1 stats0025/mean_outlier_random_effects_var1 stats0026/mean_outlier_random_effects_var1 stats0027/mean_outlier_random_effects_var1 stats0028/mean_outlier_random_effects_var1 stats0029/mean_outlier_random_effects_var1 stats0030/mean_outlier_random_effects_var1 stats0031/mean_outlier_random_effects_var1 stats0032/mean_outlier_random_effects_var1 stats0033/mean_outlier_random_effects_var1 stats0034/mean_outlier_random_effects_var1 stats0035/mean_outlier_random_effects_var1 stats0036/mean_outlier_random_effects_var1 stats0037/mean_outlier_random_effects_var1 stats0038/mean_outlier_random_effects_var1 stats0039/mean_outlier_random_effects_var1 stats0040/mean_outlier_random_effects_var1 stats0041/mean_outlier_random_effects_var1 stats0042/mean_outlier_random_effects_var1 stats0043/mean_outlier_random_effects_var1 stats0044/mean_outlier_random_effects_var1
  739. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/mean_random_effects_var1.nii.gz stats0000/mean_random_effects_var1 stats0001/mean_random_effects_var1 stats0002/mean_random_effects_var1 stats0003/mean_random_effects_var1 stats0004/mean_random_effects_var1 stats0005/mean_random_effects_var1 stats0006/mean_random_effects_var1 stats0007/mean_random_effects_var1 stats0008/mean_random_effects_var1 stats0009/mean_random_effects_var1 stats0010/mean_random_effects_var1 stats0011/mean_random_effects_var1 stats0012/mean_random_effects_var1 stats0013/mean_random_effects_var1 stats0014/mean_random_effects_var1 stats0015/mean_random_effects_var1 stats0016/mean_random_effects_var1 stats0017/mean_random_effects_var1 stats0018/mean_random_effects_var1 stats0019/mean_random_effects_var1 stats0020/mean_random_effects_var1 stats0021/mean_random_effects_var1 stats0022/mean_random_effects_var1 stats0023/mean_random_effects_var1 stats0024/mean_random_effects_var1 stats0025/mean_random_effects_var1 stats0026/mean_random_effects_var1 stats0027/mean_random_effects_var1 stats0028/mean_random_effects_var1 stats0029/mean_random_effects_var1 stats0030/mean_random_effects_var1 stats0031/mean_random_effects_var1 stats0032/mean_random_effects_var1 stats0033/mean_random_effects_var1 stats0034/mean_random_effects_var1 stats0035/mean_random_effects_var1 stats0036/mean_random_effects_var1 stats0037/mean_random_effects_var1 stats0038/mean_random_effects_var1 stats0039/mean_random_effects_var1 stats0040/mean_random_effects_var1 stats0041/mean_random_effects_var1 stats0042/mean_random_effects_var1 stats0043/mean_random_effects_var1 stats0044/mean_random_effects_var1
  740. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/pe1.nii.gz stats0000/pe1 stats0001/pe1 stats0002/pe1 stats0003/pe1 stats0004/pe1 stats0005/pe1 stats0006/pe1 stats0007/pe1 stats0008/pe1 stats0009/pe1 stats0010/pe1 stats0011/pe1 stats0012/pe1 stats0013/pe1 stats0014/pe1 stats0015/pe1 stats0016/pe1 stats0017/pe1 stats0018/pe1 stats0019/pe1 stats0020/pe1 stats0021/pe1 stats0022/pe1 stats0023/pe1 stats0024/pe1 stats0025/pe1 stats0026/pe1 stats0027/pe1 stats0028/pe1 stats0029/pe1 stats0030/pe1 stats0031/pe1 stats0032/pe1 stats0033/pe1 stats0034/pe1 stats0035/pe1 stats0036/pe1 stats0037/pe1 stats0038/pe1 stats0039/pe1 stats0040/pe1 stats0041/pe1 stats0042/pe1 stats0043/pe1 stats0044/pe1
  741. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/prob_outlier1.nii.gz stats0000/prob_outlier1 stats0001/prob_outlier1 stats0002/prob_outlier1 stats0003/prob_outlier1 stats0004/prob_outlier1 stats0005/prob_outlier1 stats0006/prob_outlier1 stats0007/prob_outlier1 stats0008/prob_outlier1 stats0009/prob_outlier1 stats0010/prob_outlier1 stats0011/prob_outlier1 stats0012/prob_outlier1 stats0013/prob_outlier1 stats0014/prob_outlier1 stats0015/prob_outlier1 stats0016/prob_outlier1 stats0017/prob_outlier1 stats0018/prob_outlier1 stats0019/prob_outlier1 stats0020/prob_outlier1 stats0021/prob_outlier1 stats0022/prob_outlier1 stats0023/prob_outlier1 stats0024/prob_outlier1 stats0025/prob_outlier1 stats0026/prob_outlier1 stats0027/prob_outlier1 stats0028/prob_outlier1 stats0029/prob_outlier1 stats0030/prob_outlier1 stats0031/prob_outlier1 stats0032/prob_outlier1 stats0033/prob_outlier1 stats0034/prob_outlier1 stats0035/prob_outlier1 stats0036/prob_outlier1 stats0037/prob_outlier1 stats0038/prob_outlier1 stats0039/prob_outlier1 stats0040/prob_outlier1 stats0041/prob_outlier1 stats0042/prob_outlier1 stats0043/prob_outlier1 stats0044/prob_outlier1
  742. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/res4d.nii.gz stats0000/res4d stats0001/res4d stats0002/res4d stats0003/res4d stats0004/res4d stats0005/res4d stats0006/res4d stats0007/res4d stats0008/res4d stats0009/res4d stats0010/res4d stats0011/res4d stats0012/res4d stats0013/res4d stats0014/res4d stats0015/res4d stats0016/res4d stats0017/res4d stats0018/res4d stats0019/res4d stats0020/res4d stats0021/res4d stats0022/res4d stats0023/res4d stats0024/res4d stats0025/res4d stats0026/res4d stats0027/res4d stats0028/res4d stats0029/res4d stats0030/res4d stats0031/res4d stats0032/res4d stats0033/res4d stats0034/res4d stats0035/res4d stats0036/res4d stats0037/res4d stats0038/res4d stats0039/res4d stats0040/res4d stats0041/res4d stats0042/res4d stats0043/res4d stats0044/res4d
  743. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/tdof_t1.nii.gz stats0000/tdof_t1 stats0001/tdof_t1 stats0002/tdof_t1 stats0003/tdof_t1 stats0004/tdof_t1 stats0005/tdof_t1 stats0006/tdof_t1 stats0007/tdof_t1 stats0008/tdof_t1 stats0009/tdof_t1 stats0010/tdof_t1 stats0011/tdof_t1 stats0012/tdof_t1 stats0013/tdof_t1 stats0014/tdof_t1 stats0015/tdof_t1 stats0016/tdof_t1 stats0017/tdof_t1 stats0018/tdof_t1 stats0019/tdof_t1 stats0020/tdof_t1 stats0021/tdof_t1 stats0022/tdof_t1 stats0023/tdof_t1 stats0024/tdof_t1 stats0025/tdof_t1 stats0026/tdof_t1 stats0027/tdof_t1 stats0028/tdof_t1 stats0029/tdof_t1 stats0030/tdof_t1 stats0031/tdof_t1 stats0032/tdof_t1 stats0033/tdof_t1 stats0034/tdof_t1 stats0035/tdof_t1 stats0036/tdof_t1 stats0037/tdof_t1 stats0038/tdof_t1 stats0039/tdof_t1 stats0040/tdof_t1 stats0041/tdof_t1 stats0042/tdof_t1 stats0043/tdof_t1 stats0044/tdof_t1
  744. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/tstat1.nii.gz stats0000/tstat1 stats0001/tstat1 stats0002/tstat1 stats0003/tstat1 stats0004/tstat1 stats0005/tstat1 stats0006/tstat1 stats0007/tstat1 stats0008/tstat1 stats0009/tstat1 stats0010/tstat1 stats0011/tstat1 stats0012/tstat1 stats0013/tstat1 stats0014/tstat1 stats0015/tstat1 stats0016/tstat1 stats0017/tstat1 stats0018/tstat1 stats0019/tstat1 stats0020/tstat1 stats0021/tstat1 stats0022/tstat1 stats0023/tstat1 stats0024/tstat1 stats0025/tstat1 stats0026/tstat1 stats0027/tstat1 stats0028/tstat1 stats0029/tstat1 stats0030/tstat1 stats0031/tstat1 stats0032/tstat1 stats0033/tstat1 stats0034/tstat1 stats0035/tstat1 stats0036/tstat1 stats0037/tstat1 stats0038/tstat1 stats0039/tstat1 stats0040/tstat1 stats0041/tstat1 stats0042/tstat1 stats0043/tstat1 stats0044/tstat1
  745. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/varcope1.nii.gz stats0000/varcope1 stats0001/varcope1 stats0002/varcope1 stats0003/varcope1 stats0004/varcope1 stats0005/varcope1 stats0006/varcope1 stats0007/varcope1 stats0008/varcope1 stats0009/varcope1 stats0010/varcope1 stats0011/varcope1 stats0012/varcope1 stats0013/varcope1 stats0014/varcope1 stats0015/varcope1 stats0016/varcope1 stats0017/varcope1 stats0018/varcope1 stats0019/varcope1 stats0020/varcope1 stats0021/varcope1 stats0022/varcope1 stats0023/varcope1 stats0024/varcope1 stats0025/varcope1 stats0026/varcope1 stats0027/varcope1 stats0028/varcope1 stats0029/varcope1 stats0030/varcope1 stats0031/varcope1 stats0032/varcope1 stats0033/varcope1 stats0034/varcope1 stats0035/varcope1 stats0036/varcope1 stats0037/varcope1 stats0038/varcope1 stats0039/varcope1 stats0040/varcope1 stats0041/varcope1 stats0042/varcope1 stats0043/varcope1 stats0044/varcope1
  746. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/weights1.nii.gz stats0000/weights1 stats0001/weights1 stats0002/weights1 stats0003/weights1 stats0004/weights1 stats0005/weights1 stats0006/weights1 stats0007/weights1 stats0008/weights1 stats0009/weights1 stats0010/weights1 stats0011/weights1 stats0012/weights1 stats0013/weights1 stats0014/weights1 stats0015/weights1 stats0016/weights1 stats0017/weights1 stats0018/weights1 stats0019/weights1 stats0020/weights1 stats0021/weights1 stats0022/weights1 stats0023/weights1 stats0024/weights1 stats0025/weights1 stats0026/weights1 stats0027/weights1 stats0028/weights1 stats0029/weights1 stats0030/weights1 stats0031/weights1 stats0032/weights1 stats0033/weights1 stats0034/weights1 stats0035/weights1 stats0036/weights1 stats0037/weights1 stats0038/weights1 stats0039/weights1 stats0040/weights1 stats0041/weights1 stats0042/weights1 stats0043/weights1 stats0044/weights1
  747. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/zflame1lowertstat1.nii.gz stats0000/zflame1lowertstat1 stats0001/zflame1lowertstat1 stats0002/zflame1lowertstat1 stats0003/zflame1lowertstat1 stats0004/zflame1lowertstat1 stats0005/zflame1lowertstat1 stats0006/zflame1lowertstat1 stats0007/zflame1lowertstat1 stats0008/zflame1lowertstat1 stats0009/zflame1lowertstat1 stats0010/zflame1lowertstat1 stats0011/zflame1lowertstat1 stats0012/zflame1lowertstat1 stats0013/zflame1lowertstat1 stats0014/zflame1lowertstat1 stats0015/zflame1lowertstat1 stats0016/zflame1lowertstat1 stats0017/zflame1lowertstat1 stats0018/zflame1lowertstat1 stats0019/zflame1lowertstat1 stats0020/zflame1lowertstat1 stats0021/zflame1lowertstat1 stats0022/zflame1lowertstat1 stats0023/zflame1lowertstat1 stats0024/zflame1lowertstat1 stats0025/zflame1lowertstat1 stats0026/zflame1lowertstat1 stats0027/zflame1lowertstat1 stats0028/zflame1lowertstat1 stats0029/zflame1lowertstat1 stats0030/zflame1lowertstat1 stats0031/zflame1lowertstat1 stats0032/zflame1lowertstat1 stats0033/zflame1lowertstat1 stats0034/zflame1lowertstat1 stats0035/zflame1lowertstat1 stats0036/zflame1lowertstat1 stats0037/zflame1lowertstat1 stats0038/zflame1lowertstat1 stats0039/zflame1lowertstat1 stats0040/zflame1lowertstat1 stats0041/zflame1lowertstat1 stats0042/zflame1lowertstat1 stats0043/zflame1lowertstat1 stats0044/zflame1lowertstat1
  748. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/zflame1uppertstat1.nii.gz stats0000/zflame1uppertstat1 stats0001/zflame1uppertstat1 stats0002/zflame1uppertstat1 stats0003/zflame1uppertstat1 stats0004/zflame1uppertstat1 stats0005/zflame1uppertstat1 stats0006/zflame1uppertstat1 stats0007/zflame1uppertstat1 stats0008/zflame1uppertstat1 stats0009/zflame1uppertstat1 stats0010/zflame1uppertstat1 stats0011/zflame1uppertstat1 stats0012/zflame1uppertstat1 stats0013/zflame1uppertstat1 stats0014/zflame1uppertstat1 stats0015/zflame1uppertstat1 stats0016/zflame1uppertstat1 stats0017/zflame1uppertstat1 stats0018/zflame1uppertstat1 stats0019/zflame1uppertstat1 stats0020/zflame1uppertstat1 stats0021/zflame1uppertstat1 stats0022/zflame1uppertstat1 stats0023/zflame1uppertstat1 stats0024/zflame1uppertstat1 stats0025/zflame1uppertstat1 stats0026/zflame1uppertstat1 stats0027/zflame1uppertstat1 stats0028/zflame1uppertstat1 stats0029/zflame1uppertstat1 stats0030/zflame1uppertstat1 stats0031/zflame1uppertstat1 stats0032/zflame1uppertstat1 stats0033/zflame1uppertstat1 stats0034/zflame1uppertstat1 stats0035/zflame1uppertstat1 stats0036/zflame1uppertstat1 stats0037/zflame1uppertstat1 stats0038/zflame1uppertstat1 stats0039/zflame1uppertstat1 stats0040/zflame1uppertstat1 stats0041/zflame1uppertstat1 stats0042/zflame1uppertstat1 stats0043/zflame1uppertstat1 stats0044/zflame1uppertstat1
  749. /usr/share/fsl/5.0/bin/fslmerge -z stats0000/zstat1.nii.gz stats0000/zstat1 stats0001/zstat1 stats0002/zstat1 stats0003/zstat1 stats0004/zstat1 stats0005/zstat1 stats0006/zstat1 stats0007/zstat1 stats0008/zstat1 stats0009/zstat1 stats0010/zstat1 stats0011/zstat1 stats0012/zstat1 stats0013/zstat1 stats0014/zstat1 stats0015/zstat1 stats0016/zstat1 stats0017/zstat1 stats0018/zstat1 stats0019/zstat1 stats0020/zstat1 stats0021/zstat1 stats0022/zstat1 stats0023/zstat1 stats0024/zstat1 stats0025/zstat1 stats0026/zstat1 stats0027/zstat1 stats0028/zstat1 stats0029/zstat1 stats0030/zstat1 stats0031/zstat1 stats0032/zstat1 stats0033/zstat1 stats0034/zstat1 stats0035/zstat1 stats0036/zstat1 stats0037/zstat1 stats0038/zstat1 stats0039/zstat1 stats0040/zstat1 stats0041/zstat1 stats0042/zstat1 stats0043/zstat1 stats0044/zstat1
  750. /bin/mv stats0000 stats ; /bin/rm -rf stats?* tmp*
  751. /bin/rm -f stats/zem* stats/zols* stats/mask* ; /bin/mv dof stats
  752. /usr/share/fsl/5.0/bin/smoothest -d 3 -m mask -r stats/res4d > stats/smoothness
  753. </pre><hr>Post-stats<br><pre>
  754. /usr/share/fsl/5.0/bin/fslmaths stats/zstat1 -mas mask thresh_zstat1
  755. echo 84620 > thresh_zstat1.vol
  756. zstat1: DLH=0.35909 VOLUME=84620 RESELS=14.1422
  757. /usr/share/fsl/5.0/bin/cluster -i thresh_zstat1 -c stats/cope1 -t 1.64 -p 0.05 -d 0.35909 --volume=84620 --othresh=thresh_zstat1 -o cluster_mask_zstat1 --connectivity=26 --mm --olmax=lmax_zstat1_std.txt --scalarname=Z > cluster_zstat1_std.txt
  758. /usr/share/fsl/5.0/bin/cluster2html . cluster_zstat1 -std
  759. /usr/share/fsl/5.0/bin/fslstats thresh_zstat1 -l 0.0001 -R 2>/dev/null
  760. 1.640347 3.712552
  761. Rendering using zmin=1.640347 zmax=3.712552
  762. /usr/share/fsl/5.0/bin/overlay 1 0 example_func -a thresh_zstat1 1.640347 3.712552 rendered_thresh_zstat1
  763. /usr/share/fsl/5.0/bin/slicer rendered_thresh_zstat1 -S 2 750 rendered_thresh_zstat1.png
  764. /bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif
  765. </pre><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br></BODY></HTML>