visual-areas/sub-15/2ndlvl.gfeat/logs/feat2_pre

</pre><hr>Higher-level input files preparation<br><pre>

/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_SD6IlH -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_7ZEBCj -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_j9TV4Y -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_nUVbuk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_cHPpXF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_fesI2Y -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_hiFG0s -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_jsgwmS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_oDfJHh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_L4GMwC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_UePD7Q -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_LS14Vb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_ZeufiB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_PswlIQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_BJEZze -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_y8wcHR -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_VwHZb4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_13aJOA -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_3MSEUY -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_ZLtLWd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_8B31OD -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_bAaZOR -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_kNxqNh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_SFQFUH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_m8y97Z -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_1vJK2t -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_2nPRa1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_2HCdgd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_Eh1WXA -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_rP63xX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_WAor1f -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_0bnUPB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_MoOmK2 -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_q9jlgk -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_glLfNc -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_VJ1zZN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_8iCxaf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_1SCPYC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_OSZhKW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_jYpH6i -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_LV5lRG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_4iG0p5 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_1buxWg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_HjJ53B -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_eM8NMU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_TGVqLi -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_Cg02xw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_qUs5M0 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_vOvkDe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_zcxalE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_Og5Hg1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_o7rRjn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_BsO9WB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_HboLq2 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_UO4Ffo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_ffHr4x -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_y6xhtW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_mxkvTn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_t4D5ey -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_Tz5xKW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_3KoAOj -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_9lc6oy -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_PGbPKW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_TEv5tk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_3Lr4Cv -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_DV9LwX -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_29omwr -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_FEgGmd -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_UJQrGZ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_NZV9xl -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_Y4nZEG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_NNftUU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_dFffci -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_7AsFhB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_UQjMzO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_O9T52c -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_lSXGCA -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_TwUbzP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_gQ7T5f -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_81ZewE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_STdkFW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_lUOWUm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_4h81CH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_glGM92 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_AHfCfB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_RYsyLR -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_EcZ2je -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_UhFZYx -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_7TAF5Q -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_o1dpAb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_k0V7Az -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_NOciUP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_iJ6Eid -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_sa82ZA -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_P6j7TW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_mwY9ta -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_KGisAv -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_nyUVYX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_u09EWe -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_WTaV7E -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_hx2xSu -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_DlbAsd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_dvmGlz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_8zBq1U -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_W9vO0l -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_gM3LYH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_pyeel6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_ppclDi -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_hRsXIH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_EcH7F1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_aSvNHj -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_FxmAqE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_A1Kfj3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_kxeTYh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_8s1G2P -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_R5D1B8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_eWRoFu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_X1QA1S -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_PFT3Md -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_DoDXrq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_vQCf1K -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_T6gVy6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_BZSn2k -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_EZYcrF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_x02yR4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_v9Eoxo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_Kf7kzM -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_w23E08 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_veQPmq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_bxw7xS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_Qw31Pg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_VWfIEz -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg/standard bg_image

/usr/share/fsl/5.0/bin/fslmerge -t mask  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/mask

mkdir -p inputreg

/usr/share/fsl/5.0/bin/fslmaths ../mask -mul 4 -Tmean masksum -odt short

/usr/share/fsl/5.0/bin/fslmaths masksum -thr 4 -add masksum masksum

/usr/share/fsl/5.0/bin/overlay 0 0 -c ../bg_image -a masksum 0.9 8 masksum_overlay

/usr/share/fsl/5.0/bin/slicer masksum_overlay -S 2 750 masksum_overlay.png

/usr/share/fsl/5.0/bin/fslmaths masksum -mul 0 maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/mask -mul -1 -add 1 -mul 1 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/mask -mul -1 -add 1 -mul 2 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/mask -mul -1 -add 1 -mul 3 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/mask -mul -1 -add 1 -mul 4 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths masksum -thr 3 -uthr 3 -bin -mul maskunique maskunique

/usr/share/fsl/5.0/bin/overlay 0 0 ../bg_image -a maskunique 0.9 4 maskunique_overlay

/usr/share/fsl/5.0/bin/slicer maskunique_overlay -S 2 750 maskunique_overlay.png

/bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif

/usr/share/fsl/5.0/bin/fslmaths mask -Tmin mask

/usr/share/fsl/5.0/bin/fslmerge -t mean_func  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/mean_func

/usr/share/fsl/5.0/bin/fslmaths mean_func -Tmean mean_func

/usr/share/fsl/5.0/bin/fslmerge -t cope1  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope1

/usr/share/fsl/5.0/bin/fslmaths cope1 -mas mask cope1

printf '0.21057142499999998 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope1  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope1

/usr/share/fsl/5.0/bin/fslmaths varcope1 -mas mask varcope1

/usr/share/fsl/5.0/bin/fslmerge -t cope2  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope2

/usr/share/fsl/5.0/bin/fslmaths cope2 -mas mask cope2

printf '0.233207325 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope2  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope2

/usr/share/fsl/5.0/bin/fslmaths varcope2 -mas mask varcope2

/usr/share/fsl/5.0/bin/fslmerge -t cope3  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope3

/usr/share/fsl/5.0/bin/fslmaths cope3 -mas mask cope3

printf '0.296461175 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope3  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope3

/usr/share/fsl/5.0/bin/fslmaths varcope3 -mas mask varcope3

/usr/share/fsl/5.0/bin/fslmerge -t cope4  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope4

/usr/share/fsl/5.0/bin/fslmaths cope4 -mas mask cope4

printf '0.2345093 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope4  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope4

/usr/share/fsl/5.0/bin/fslmaths varcope4 -mas mask varcope4

/usr/share/fsl/5.0/bin/fslmerge -t cope5  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope5

/usr/share/fsl/5.0/bin/fslmaths cope5 -mas mask cope5

printf '0.232709575 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope5  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope5

/usr/share/fsl/5.0/bin/fslmaths varcope5 -mas mask varcope5

/usr/share/fsl/5.0/bin/fslmerge -t cope6  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope6

/usr/share/fsl/5.0/bin/fslmaths cope6 -mas mask cope6

printf '0.232709575 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope6  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope6

/usr/share/fsl/5.0/bin/fslmaths varcope6 -mas mask varcope6

/usr/share/fsl/5.0/bin/fslmerge -t cope7  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope7

/usr/share/fsl/5.0/bin/fslmaths cope7 -mas mask cope7

printf '0.5788201 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope7  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope7

/usr/share/fsl/5.0/bin/fslmaths varcope7 -mas mask varcope7

/usr/share/fsl/5.0/bin/fslmerge -t cope8  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope8

/usr/share/fsl/5.0/bin/fslmaths cope8 -mas mask cope8

printf '0.5881132 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope8  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope8

/usr/share/fsl/5.0/bin/fslmaths varcope8 -mas mask varcope8

/usr/share/fsl/5.0/bin/fslmerge -t cope9  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope9

/usr/share/fsl/5.0/bin/fslmaths cope9 -mas mask cope9

printf '0.582819325 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope9  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope9

/usr/share/fsl/5.0/bin/fslmaths varcope9 -mas mask varcope9

/usr/share/fsl/5.0/bin/fslmerge -t cope10  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope10

/usr/share/fsl/5.0/bin/fslmaths cope10 -mas mask cope10

printf '1.1550025 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope10  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope10

/usr/share/fsl/5.0/bin/fslmaths varcope10 -mas mask varcope10

/usr/share/fsl/5.0/bin/fslmerge -t cope11  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope11

/usr/share/fsl/5.0/bin/fslmaths cope11 -mas mask cope11

printf '1.139402 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope11  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope11

/usr/share/fsl/5.0/bin/fslmaths varcope11 -mas mask varcope11

/usr/share/fsl/5.0/bin/fslmerge -t cope12  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope12

/usr/share/fsl/5.0/bin/fslmaths cope12 -mas mask cope12

printf '0.56896935 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope12  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope12

/usr/share/fsl/5.0/bin/fslmaths varcope12 -mas mask varcope12

/usr/share/fsl/5.0/bin/fslmerge -t cope13  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope13

/usr/share/fsl/5.0/bin/fslmaths cope13 -mas mask cope13

printf '1.15478 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope13  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope13

/usr/share/fsl/5.0/bin/fslmaths varcope13 -mas mask varcope13

/usr/share/fsl/5.0/bin/fslmerge -t cope14  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope14

/usr/share/fsl/5.0/bin/fslmaths cope14 -mas mask cope14

printf '1.13735125 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope14  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope14

/usr/share/fsl/5.0/bin/fslmaths varcope14 -mas mask varcope14

/usr/share/fsl/5.0/bin/fslmerge -t cope15  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/cope15

/usr/share/fsl/5.0/bin/fslmaths cope15 -mas mask cope15

printf '1.136857 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope15  /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-1.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-2.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-3.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-15/run-4.feat/reg_standard/stats/varcope15

/usr/share/fsl/5.0/bin/fslmaths varcope15 -mas mask varcope15