Scheduled service maintenance on November 22


On Friday, November 22, 2024, between 06:00 CET and 18:00 CET, GIN services will undergo planned maintenance. Extended service interruptions should be expected. We will try to keep downtimes to a minimum, but recommend that users avoid critical tasks, large data uploads, or DOI requests during this time.

We apologize for any inconvenience.

report_log.html 60 KB

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  1. <HTML><HEAD>
  2. <!--refreshstart-->
  3. <!--refreshstop-->
  4. <link REL=stylesheet TYPE=text/css href=.files/fsl.css>
  5. <TITLE>FSL</TITLE></HEAD><BODY><OBJECT data=report.html></OBJECT>
  6. <h2>Progress Report / Log</h2>
  7. Started at Tue Mar 22 11:22:00 CET 2016<p>
  8. Feat main script<br><pre>
  9. /bin/cp /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2nd_z164_nomc.fsf design.fsf
  10. /usr/share/fsl/5.0/bin/feat_model design
  11. mkdir .files;cp /usr/share/fsl/5.0/doc/fsl.css .files;cp -r /usr/share/fsl/5.0/doc/images .files/images
  12. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat2_pre /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat -gfeatprep
  13. 4032243
  14. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4032243 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope1.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope1.feat -I 1 -flame1
  15. 200937
  16. /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 200937 -t ./.flame
  17. 215408
  18. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 215408 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope1.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope1.feat -flame3
  19. 242989
  20. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 242989 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope1.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope1.feat -poststats 1
  21. 243871
  22. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 243871 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope1.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope1.feat -stop
  23. 245778
  24. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4032243 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope2.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope2.feat -I 2 -flame1
  25. 246584
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  27. 249925
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  29. 303181
  30. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 303181 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope2.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope2.feat -poststats 1
  31. 303515
  32. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 303515 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope2.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope2.feat -stop
  33. 304276
  34. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4032243 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope3.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope3.feat -I 3 -flame1
  35. 304664
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  39. 360153
  40. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 360153 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope3.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope3.feat -poststats 1
  41. 360480
  42. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 360480 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope3.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope3.feat -stop
  43. 361233
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  45. 361621
  46. /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 361621 -t ./.flame
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  49. 417199
  50. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 417199 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope4.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope4.feat -poststats 1
  51. 417534
  52. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 417534 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope4.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope4.feat -stop
  53. 418286
  54. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4032243 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope5.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope5.feat -I 5 -flame1
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  56. /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 418674 -t ./.flame
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  59. 477698
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  61. 478026
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  63. 478781
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  69. 530966
  70. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 530966 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope6.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope6.feat -poststats 1
  71. 531294
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  103. 702858
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  110. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 758664 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope10.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope10.feat -poststats 1
  111. 758997
  112. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 758997 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope10.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope10.feat -stop
  113. 759756
  114. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4032243 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope11.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope11.feat -I 11 -flame1
  115. 760144
  116. /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 760144 -t ./.flame
  117. 762183
  118. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 762183 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope11.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope11.feat -flame3
  119. 819123
  120. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 819123 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope11.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope11.feat -poststats 1
  121. 819458
  122. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 819458 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope11.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope11.feat -stop
  123. 820212
  124. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4032243 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope12.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope12.feat -I 12 -flame1
  125. 820600
  126. /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 820600 -t ./.flame
  127. 822645
  128. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 822645 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope12.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope12.feat -flame3
  129. 872417
  130. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 872417 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope12.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope12.feat -poststats 1
  131. 872739
  132. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 872739 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope12.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope12.feat -stop
  133. 873492
  134. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4032243 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope13.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope13.feat -I 13 -flame1
  135. 873886
  136. /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 873886 -t ./.flame
  137. 875911
  138. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 875911 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope13.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope13.feat -flame3
  139. 923706
  140. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 923706 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope13.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope13.feat -poststats 1
  141. 924746
  142. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 924746 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope13.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope13.feat -stop
  143. 926560
  144. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4032243 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope14.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope14.feat -I 14 -flame1
  145. 927777
  146. /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 927777 -t ./.flame
  147. 930621
  148. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 930621 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope14.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope14.feat -flame3
  149. 970441
  150. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 970441 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope14.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope14.feat -poststats 1
  151. 970764
  152. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 970764 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope14.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope14.feat -stop
  153. 971515
  154. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4032243 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope15.feat -I 15 -flame1
  155. 971904
  156. /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 971904 -t ./.flame
  157. 973909
  158. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 973909 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope15.feat -flame3
  159. 1005889
  160. /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 1005889 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope15.feat -poststats 1
  161. 1006218
  162. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 1006218 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope15.feat -stop
  163. 1006972
  164. /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 245778,304276,361233,418286,478781,532048,581810,638743,702858,759756,820212,873492,926560,971515,1006972 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-19/2ndlvl_z164_nomc.gfeat -stop
  165. </pre><hr>Higher-level input files preparation<br><pre>
  166. /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat
  167. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_NmFNvZ -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  168. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_tdYFoE -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  169. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_R2dTjo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  170. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_tTsl9J -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  171. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_R2aZbY -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  172. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_U2n3Bt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  173. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_nMsZRU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  174. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_tjw3Mg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  175. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_p1XqOG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  176. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_ZvqUfW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  177. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_bTbzYk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  178. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_WlIxTG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  179. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_dQKQuV -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  180. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_H2NaxC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  181. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_fRBeaU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  182. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_GkDJFm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  183. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_5zSH1K -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  184. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_guUyh0 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  185. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_7aMErn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  186. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_kgSeMM -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  187. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_FI3YHW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  188. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_VZ3OFo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  189. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_L662ZJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  190. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_279o3b -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  191. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_EIMdVG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  192. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_6m8ue7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  193. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_W5pyGs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  194. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_sRuWGN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  195. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_NXQNn6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  196. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_E31Byt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  197. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_xogw5O -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  198. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_v12kpa -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  199. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_W0Xm6k -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
  200. /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat
  201. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_9oLpBN -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  202. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_2SwJRy -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  203. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_IODvKi -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  204. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_WUQtTG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  205. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_Tn3JU4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  206. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_EIkGMk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  207. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_1VDM3J -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  208. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_Q8bek7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  209. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_oaBm3p -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  210. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_Euy9AO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  211. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_uuuh7b -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  212. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_CqhgYr -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  213. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_SBdTX0 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  214. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_FPc2Fg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  215. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_UsmyfB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  216. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_glMEp1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  217. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_Kdfwyo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  218. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_uJ0dOG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  219. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_ErH9O3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  220. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_dwnvIs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  221. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_sbuUBC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  222. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_atTlSh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  223. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_na5eWx -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  224. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_MlO28T -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  225. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_W90BAq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  226. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_qPCuyD -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  227. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_RRSEj7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  228. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_5BQQav -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  229. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_XGwQQF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  230. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_faTQW1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  231. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_MYzx6n -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  232. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_qPgXyC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  233. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_zCIvS1 -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
  234. /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat
  235. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_Ogkj3v -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  236. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_EuneXc -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  237. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_lShQFO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  238. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_65rolg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  239. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_FoImUD -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  240. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_EJLsBT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  241. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_i8WLJn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  242. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_k67IFG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  243. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_w7sjhc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  244. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_gQRWHx -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  245. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_JbvxCR -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  246. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_mvqxxd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  247. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_pKh87A -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  248. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_iSf3JS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  249. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_LU1K0e -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  250. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_LxuU7E -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  251. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_AWKz4U -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  252. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_6Mb43t -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  253. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_IiudOS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  254. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_cfH1X4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  255. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_cDNm0p -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  256. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_9FM3QP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  257. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_0c3woZ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  258. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_FAeSJm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  259. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_jZe7DK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  260. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_9qVy0X -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  261. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_ANwGpi -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  262. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_U7ls2K -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  263. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_SGdVWW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  264. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_FGQg7j -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  265. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_2rbkaJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  266. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_gdWsdU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  267. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_pMqRDi -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
  268. /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat
  269. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_xLoUNP -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  270. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_PHM9gq -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
  271. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_RJGac8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  272. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_KiE4au -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  273. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_6e5uIT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  274. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_yooAf3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  275. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_Sw39dt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  276. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_cSlcXY -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  277. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_epFBud -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  278. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_N4BxqB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  279. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_IcZSJW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  280. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_2aImuc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  281. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_qU8Efw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  282. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_T2Vxv2 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  283. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_lSDnwj -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  284. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_peCI9G -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  285. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_GBsz8Y -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  286. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_nqoTHc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  287. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_NR0Znz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  288. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_1HtvzW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  289. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_zGlbce -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  290. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_bfT50D -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  291. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_OMtcQ2 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  292. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_Be6Rwk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  293. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_KZvCTG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  294. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_Z1l4M2 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  295. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_8i5TRq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  296. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_zWEMID -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  297. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_5IUNp1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  298. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_wx1A9p -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  299. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_mXXcNC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  300. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_DzTBAc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
  301. /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_c9EPAA -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
  302. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg/standard bg_image
  303. /usr/share/fsl/5.0/bin/fslmerge -t mask /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/mask
  304. mkdir -p inputreg
  305. /usr/share/fsl/5.0/bin/fslmaths ../mask -mul 4 -Tmean masksum -odt short
  306. /usr/share/fsl/5.0/bin/fslmaths masksum -thr 4 -add masksum masksum
  307. /usr/share/fsl/5.0/bin/overlay 0 0 -c ../bg_image -a masksum 0.9 8 masksum_overlay
  308. /usr/share/fsl/5.0/bin/slicer masksum_overlay -S 2 750 masksum_overlay.png
  309. /usr/share/fsl/5.0/bin/fslmaths masksum -mul 0 maskunique
  310. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/mask -mul -1 -add 1 -mul 1 -add maskunique maskunique
  311. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/mask -mul -1 -add 1 -mul 2 -add maskunique maskunique
  312. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/mask -mul -1 -add 1 -mul 3 -add maskunique maskunique
  313. /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/mask -mul -1 -add 1 -mul 4 -add maskunique maskunique
  314. /usr/share/fsl/5.0/bin/fslmaths masksum -thr 3 -uthr 3 -bin -mul maskunique maskunique
  315. /usr/share/fsl/5.0/bin/overlay 0 0 ../bg_image -a maskunique 0.9 4 maskunique_overlay
  316. /usr/share/fsl/5.0/bin/slicer maskunique_overlay -S 2 750 maskunique_overlay.png
  317. /bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif
  318. /usr/share/fsl/5.0/bin/fslmaths mask -Tmin mask
  319. /usr/share/fsl/5.0/bin/fslmerge -t mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/mean_func
  320. /usr/share/fsl/5.0/bin/fslmaths mean_func -Tmean mean_func
  321. /usr/share/fsl/5.0/bin/fslmerge -t cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope1
  322. /usr/share/fsl/5.0/bin/fslmaths cope1 -mas mask cope1
  323. printf '0.210611625 ' >> design.lcon
  324. /usr/share/fsl/5.0/bin/fslmerge -t varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope1
  325. /usr/share/fsl/5.0/bin/fslmaths varcope1 -mas mask varcope1
  326. /usr/share/fsl/5.0/bin/fslmerge -t cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope2
  327. /usr/share/fsl/5.0/bin/fslmaths cope2 -mas mask cope2
  328. printf '0.233199425 ' >> design.lcon
  329. /usr/share/fsl/5.0/bin/fslmerge -t varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope2
  330. /usr/share/fsl/5.0/bin/fslmaths varcope2 -mas mask varcope2
  331. /usr/share/fsl/5.0/bin/fslmerge -t cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope3
  332. /usr/share/fsl/5.0/bin/fslmaths cope3 -mas mask cope3
  333. printf '0.2964672 ' >> design.lcon
  334. /usr/share/fsl/5.0/bin/fslmerge -t varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope3
  335. /usr/share/fsl/5.0/bin/fslmaths varcope3 -mas mask varcope3
  336. /usr/share/fsl/5.0/bin/fslmerge -t cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope4
  337. /usr/share/fsl/5.0/bin/fslmaths cope4 -mas mask cope4
  338. printf '0.234505475 ' >> design.lcon
  339. /usr/share/fsl/5.0/bin/fslmerge -t varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope4
  340. /usr/share/fsl/5.0/bin/fslmaths varcope4 -mas mask varcope4
  341. /usr/share/fsl/5.0/bin/fslmerge -t cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope5
  342. /usr/share/fsl/5.0/bin/fslmaths cope5 -mas mask cope5
  343. printf '0.23262144999999998 ' >> design.lcon
  344. /usr/share/fsl/5.0/bin/fslmerge -t varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope5
  345. /usr/share/fsl/5.0/bin/fslmaths varcope5 -mas mask varcope5
  346. /usr/share/fsl/5.0/bin/fslmerge -t cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope6
  347. /usr/share/fsl/5.0/bin/fslmaths cope6 -mas mask cope6
  348. printf '0.23262144999999998 ' >> design.lcon
  349. /usr/share/fsl/5.0/bin/fslmerge -t varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope6
  350. /usr/share/fsl/5.0/bin/fslmaths varcope6 -mas mask varcope6
  351. /usr/share/fsl/5.0/bin/fslmerge -t cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope7
  352. /usr/share/fsl/5.0/bin/fslmaths cope7 -mas mask cope7
  353. printf '0.5787862749999999 ' >> design.lcon
  354. /usr/share/fsl/5.0/bin/fslmerge -t varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope7
  355. /usr/share/fsl/5.0/bin/fslmaths varcope7 -mas mask varcope7
  356. /usr/share/fsl/5.0/bin/fslmerge -t cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope8
  357. /usr/share/fsl/5.0/bin/fslmaths cope8 -mas mask cope8
  358. printf '0.58815475 ' >> design.lcon
  359. /usr/share/fsl/5.0/bin/fslmerge -t varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope8
  360. /usr/share/fsl/5.0/bin/fslmaths varcope8 -mas mask varcope8
  361. /usr/share/fsl/5.0/bin/fslmerge -t cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope9
  362. /usr/share/fsl/5.0/bin/fslmaths cope9 -mas mask cope9
  363. printf '0.5827360500000001 ' >> design.lcon
  364. /usr/share/fsl/5.0/bin/fslmerge -t varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope9
  365. /usr/share/fsl/5.0/bin/fslmaths varcope9 -mas mask varcope9
  366. /usr/share/fsl/5.0/bin/fslmerge -t cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope10
  367. /usr/share/fsl/5.0/bin/fslmaths cope10 -mas mask cope10
  368. printf '1.154873 ' >> design.lcon
  369. /usr/share/fsl/5.0/bin/fslmerge -t varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope10
  370. /usr/share/fsl/5.0/bin/fslmaths varcope10 -mas mask varcope10
  371. /usr/share/fsl/5.0/bin/fslmerge -t cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope11
  372. /usr/share/fsl/5.0/bin/fslmaths cope11 -mas mask cope11
  373. printf '1.139523 ' >> design.lcon
  374. /usr/share/fsl/5.0/bin/fslmerge -t varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope11
  375. /usr/share/fsl/5.0/bin/fslmaths varcope11 -mas mask varcope11
  376. /usr/share/fsl/5.0/bin/fslmerge -t cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope12
  377. /usr/share/fsl/5.0/bin/fslmaths cope12 -mas mask cope12
  378. printf '0.56902955 ' >> design.lcon
  379. /usr/share/fsl/5.0/bin/fslmerge -t varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope12
  380. /usr/share/fsl/5.0/bin/fslmaths varcope12 -mas mask varcope12
  381. /usr/share/fsl/5.0/bin/fslmerge -t cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope13
  382. /usr/share/fsl/5.0/bin/fslmaths cope13 -mas mask cope13
  383. printf '1.1545155 ' >> design.lcon
  384. /usr/share/fsl/5.0/bin/fslmerge -t varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope13
  385. /usr/share/fsl/5.0/bin/fslmaths varcope13 -mas mask varcope13
  386. /usr/share/fsl/5.0/bin/fslmerge -t cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope14
  387. /usr/share/fsl/5.0/bin/fslmaths cope14 -mas mask cope14
  388. printf '1.13741775 ' >> design.lcon
  389. /usr/share/fsl/5.0/bin/fslmerge -t varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope14
  390. /usr/share/fsl/5.0/bin/fslmaths varcope14 -mas mask varcope14
  391. /usr/share/fsl/5.0/bin/fslmerge -t cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/cope15
  392. /usr/share/fsl/5.0/bin/fslmaths cope15 -mas mask cope15
  393. printf '1.13691525 ' >> design.lcon
  394. /usr/share/fsl/5.0/bin/fslmerge -t varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-1.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-2.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-3.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-19/run-4.feat/reg_standard/stats/varcope15
  395. /usr/share/fsl/5.0/bin/fslmaths varcope15 -mas mask varcope15
  396. </pre><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br></BODY></HTML>