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- <HTML><HEAD>
- <!--refreshstart-->
- <!--refreshstop-->
- <link REL=stylesheet TYPE=text/css href=.files/fsl.css>
- <TITLE>FSL</TITLE></HEAD><BODY><OBJECT data=report.html></OBJECT>
- <h2>Progress Report / Log</h2>
- Started at Tue Mar 22 11:22:00 CET 2016<p>
- Feat main script<br><pre>
- /bin/cp /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2nd_z164_nomc.fsf design.fsf
- /usr/share/fsl/5.0/bin/feat_model design
- mkdir .files;cp /usr/share/fsl/5.0/doc/fsl.css .files;cp -r /usr/share/fsl/5.0/doc/images .files/images
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat2_pre /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat -gfeatprep
- 4031903
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4031903 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope1.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope1.feat -I 1 -flame1
- 200782
- /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 200782 -t ./.flame
- 215144
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 215144 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope1.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope1.feat -flame3
- 253749
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 253749 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope1.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope1.feat -poststats 1
- 254199
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 254199 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope1.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope1.feat -stop
- 255060
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4031903 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope2.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope2.feat -I 2 -flame1
- 255485
- /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 255485 -t ./.flame
- 258205
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- 310604
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 310604 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope2.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope2.feat -poststats 1
- 310944
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 310944 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope2.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope2.feat -stop
- 311697
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- 312087
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- 314090
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- 367647
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 367647 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope3.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope3.feat -poststats 1
- 367980
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 367980 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope3.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope3.feat -stop
- 368733
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- 369121
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- 371129
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- 428429
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- 428751
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- 429506
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- 429894
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- 431927
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- 485355
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 485355 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope5.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope5.feat -poststats 1
- 485683
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- 486440
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- 486828
- /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 486828 -t ./.flame
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- 542216
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 542216 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope6.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope6.feat -poststats 1
- 542550
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 542550 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope6.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope6.feat -stop
- 543309
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4031903 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope7.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope7.feat -I 7 -flame1
- 543697
- /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 543697 -t ./.flame
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- 599332
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- 599665
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 599665 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope7.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope7.feat -stop
- 600423
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4031903 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope8.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope8.feat -I 8 -flame1
- 600811
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- 602818
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- 653080
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 653080 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope8.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope8.feat -poststats 1
- 655035
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 655035 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope8.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope8.feat -stop
- 657435
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- 657823
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- 659862
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- 713241
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- 713574
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 713574 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope9.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope9.feat -stop
- 714327
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- 714715
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- 716762
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- 773734
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- 774057
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- 774811
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4031903 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope11.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope11.feat -I 11 -flame1
- 775205
- /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 775205 -t ./.flame
- 777247
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 777247 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope11.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope11.feat -flame3
- 830751
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 830751 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope11.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope11.feat -poststats 1
- 831079
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 831079 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope11.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope11.feat -stop
- 831838
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4031903 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope12.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope12.feat -I 12 -flame1
- 832226
- /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 832226 -t ./.flame
- 834263
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 834263 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope12.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope12.feat -flame3
- 889205
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 889205 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope12.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope12.feat -poststats 1
- 889528
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 889528 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope12.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope12.feat -stop
- 890282
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4031903 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope13.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope13.feat -I 13 -flame1
- 890670
- /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 890670 -t ./.flame
- 892711
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 892711 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope13.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope13.feat -flame3
- 942466
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 942466 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope13.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope13.feat -poststats 1
- 942789
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 942789 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope13.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope13.feat -stop
- 943547
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4031903 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope14.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope14.feat -I 14 -flame1
- 943935
- /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 943935 -t ./.flame
- 945942
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 945942 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope14.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope14.feat -flame3
- 989175
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 989175 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope14.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope14.feat -poststats 1
- 989503
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 989503 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope14.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope14.feat -stop
- 990262
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3a_flame -j 4031903 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope15.feat -I 15 -flame1
- 990650
- /usr/share/fsl/5.0/bin/fsl_sub -T 0 -l logs -N feat3b_flame -j 990650 -t ./.flame
- 992690
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat3c_flame -j 992690 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope15.feat -flame3
- 1016804
- /usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat4_post -j 1016804 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope15.feat -poststats 1
- 1017133
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 1017133 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope15.feat -stop
- 1017893
- /usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 255060,311697,368733,429506,486440,543309,600423,657435,714327,774811,831838,890282,943547,990262,1017893 /usr/share/fsl/5.0/bin/feat /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat/cope15.feat/design.fsf -D /home/data/psyinf/forrest_gump/collection/visloc/sub-18/2ndlvl_z164_nomc.gfeat -stop
- </pre><hr>Higher-level input files preparation<br><pre>
- /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_embC4Q -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_VU9l9C -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_J6HNyn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_KpIibJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_wl9YgZ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_9NHM4w -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_wYy9nN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_yIHVlb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_Vv3Rrt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_hjOqhP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_nU6FwZ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_mGa8El -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_YInDiL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_tyfkGV -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_XzQhzk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_XDnYKW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_swqJP6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_5mHxFE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_b6rP1V -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_ufhDzn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_mThR7J -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_ffkUBW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_LGsHAo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_kVk58N -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_qjhX3i -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_yxmEzJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_5eTK4b -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_8zLOyy -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_qw4A6V -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_IQ0KDh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_QADXaz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_lM1HTV -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_50yjx9 -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_thlAIA -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_QoO9Jl -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_jeR768 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_3TmdYC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_0jwAHW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_JVBvpd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_0OL1dC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_fDAcmY -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_EzpYJi -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_JU8vDu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_xpLoUP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_C6ntDf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_7350Yw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_AM6m42 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_aEfjih -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_zzXVhH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_80bVL3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_lsENNi -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_bYJqlI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_EqWmU3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_DYrnwt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_SQl7aF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_HmRbzj -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_UVLCKw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_8QR1BU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_1YkK7g -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_gkk7Dy -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_12HVnW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_YPwswn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_oFF74A -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_yVLDuT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_qFgH0i -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_cmsv9v -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_NMTyuV -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_8xZtQR -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_3hJIsB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_ECxvAP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_78yzza -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_FsEf9z -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_RP8RZM -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_LGRPo8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_vHetHw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_zH1p9H -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_TQdWt9 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_MtYXlv -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_9yXYGK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_yhB1Ja -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_aLhV9s -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_8mmmWR -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_zWkn2b -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_Ni9RQD -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_LfFo4N -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_FbbaTe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_802GpA -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_uwkJUO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_wEX3Ta -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_f6cXYu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_rrTmoS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_xXQ5O2 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_iIyOXo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_o5PmhL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_Dhp3fW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_kHyyTd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_UVaiOz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_zzY6s1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_46h9yf -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_spRRBJ -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_2xi1jv -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_gA5Sud -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_vRr3dz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_34YdXW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_05rTEd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_WTAeIF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_uV8hVX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_sD0Ymc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_bk9C6z -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_ATUMGU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_3g3Nsg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_c560vE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_KjPHM2 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_sYlmwg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_bUtHUJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_mdVbz6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_DO7XQo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_OWZ3HO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_kiPETe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_Q5fXXp -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_VBvw6K -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_CeRmw6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_UWFhfk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_qSKBKH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_e9sMj6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_7Nsiip -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_uiCrMN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_gVfHK6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_weEVvn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_5WLSVJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_oq9XZb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float
- /usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_0yUmdr -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char
- /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg/standard bg_image
- /usr/share/fsl/5.0/bin/fslmerge -t mask /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/mask
- mkdir -p inputreg
- /usr/share/fsl/5.0/bin/fslmaths ../mask -mul 4 -Tmean masksum -odt short
- /usr/share/fsl/5.0/bin/fslmaths masksum -thr 4 -add masksum masksum
- /usr/share/fsl/5.0/bin/overlay 0 0 -c ../bg_image -a masksum 0.9 8 masksum_overlay
- /usr/share/fsl/5.0/bin/slicer masksum_overlay -S 2 750 masksum_overlay.png
- /usr/share/fsl/5.0/bin/fslmaths masksum -mul 0 maskunique
- /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/mask -mul -1 -add 1 -mul 1 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/mask -mul -1 -add 1 -mul 2 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/mask -mul -1 -add 1 -mul 3 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/mask -mul -1 -add 1 -mul 4 -add maskunique maskunique
- /usr/share/fsl/5.0/bin/fslmaths masksum -thr 3 -uthr 3 -bin -mul maskunique maskunique
- /usr/share/fsl/5.0/bin/overlay 0 0 ../bg_image -a maskunique 0.9 4 maskunique_overlay
- /usr/share/fsl/5.0/bin/slicer maskunique_overlay -S 2 750 maskunique_overlay.png
- /bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif
- /usr/share/fsl/5.0/bin/fslmaths mask -Tmin mask
- /usr/share/fsl/5.0/bin/fslmerge -t mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/mean_func
- /usr/share/fsl/5.0/bin/fslmaths mean_func -Tmean mean_func
- /usr/share/fsl/5.0/bin/fslmerge -t cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope1
- /usr/share/fsl/5.0/bin/fslmaths cope1 -mas mask cope1
- printf '0.210589575 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope1
- /usr/share/fsl/5.0/bin/fslmaths varcope1 -mas mask varcope1
- /usr/share/fsl/5.0/bin/fslmerge -t cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope2
- /usr/share/fsl/5.0/bin/fslmaths cope2 -mas mask cope2
- printf '0.2332068 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope2
- /usr/share/fsl/5.0/bin/fslmaths varcope2 -mas mask varcope2
- /usr/share/fsl/5.0/bin/fslmerge -t cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope3
- /usr/share/fsl/5.0/bin/fslmaths cope3 -mas mask cope3
- printf '0.29650255 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope3
- /usr/share/fsl/5.0/bin/fslmaths varcope3 -mas mask varcope3
- /usr/share/fsl/5.0/bin/fslmerge -t cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope4
- /usr/share/fsl/5.0/bin/fslmaths cope4 -mas mask cope4
- printf '0.23450295 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope4
- /usr/share/fsl/5.0/bin/fslmaths varcope4 -mas mask varcope4
- /usr/share/fsl/5.0/bin/fslmerge -t cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope5
- /usr/share/fsl/5.0/bin/fslmaths cope5 -mas mask cope5
- printf '0.232615825 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope5
- /usr/share/fsl/5.0/bin/fslmaths varcope5 -mas mask varcope5
- /usr/share/fsl/5.0/bin/fslmerge -t cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope6
- /usr/share/fsl/5.0/bin/fslmaths cope6 -mas mask cope6
- printf '0.232615825 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope6
- /usr/share/fsl/5.0/bin/fslmaths varcope6 -mas mask varcope6
- /usr/share/fsl/5.0/bin/fslmerge -t cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope7
- /usr/share/fsl/5.0/bin/fslmaths cope7 -mas mask cope7
- printf '0.5788018749999999 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope7
- /usr/share/fsl/5.0/bin/fslmaths varcope7 -mas mask varcope7
- /usr/share/fsl/5.0/bin/fslmerge -t cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope8
- /usr/share/fsl/5.0/bin/fslmaths cope8 -mas mask cope8
- printf '0.5882407249999999 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope8
- /usr/share/fsl/5.0/bin/fslmaths varcope8 -mas mask varcope8
- /usr/share/fsl/5.0/bin/fslmerge -t cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope9
- /usr/share/fsl/5.0/bin/fslmaths cope9 -mas mask cope9
- printf '0.5827359 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope9
- /usr/share/fsl/5.0/bin/fslmaths varcope9 -mas mask varcope9
- /usr/share/fsl/5.0/bin/fslmerge -t cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope10
- /usr/share/fsl/5.0/bin/fslmaths cope10 -mas mask cope10
- printf '1.1548722500000002 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope10
- /usr/share/fsl/5.0/bin/fslmaths varcope10 -mas mask varcope10
- /usr/share/fsl/5.0/bin/fslmerge -t cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope11
- /usr/share/fsl/5.0/bin/fslmaths cope11 -mas mask cope11
- printf '1.1395232499999999 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope11
- /usr/share/fsl/5.0/bin/fslmaths varcope11 -mas mask varcope11
- /usr/share/fsl/5.0/bin/fslmerge -t cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope12
- /usr/share/fsl/5.0/bin/fslmaths cope12 -mas mask cope12
- printf '0.5690159499999999 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope12
- /usr/share/fsl/5.0/bin/fslmaths varcope12 -mas mask varcope12
- /usr/share/fsl/5.0/bin/fslmerge -t cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope13
- /usr/share/fsl/5.0/bin/fslmaths cope13 -mas mask cope13
- printf '1.15452375 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope13
- /usr/share/fsl/5.0/bin/fslmaths varcope13 -mas mask varcope13
- /usr/share/fsl/5.0/bin/fslmerge -t cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope14
- /usr/share/fsl/5.0/bin/fslmaths cope14 -mas mask cope14
- printf '1.13742575 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope14
- /usr/share/fsl/5.0/bin/fslmaths varcope14 -mas mask varcope14
- /usr/share/fsl/5.0/bin/fslmerge -t cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/cope15
- /usr/share/fsl/5.0/bin/fslmaths cope15 -mas mask cope15
- printf '1.13692175 ' >> design.lcon
- /usr/share/fsl/5.0/bin/fslmerge -t varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-1.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-2.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-3.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-18/run-4.feat/reg_standard/stats/varcope15
- /usr/share/fsl/5.0/bin/fslmaths varcope15 -mas mask varcope15
- </pre><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br></BODY></HTML>
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