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2ndlvl.gfeat
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cope14.feat
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feat4_post

feat4_post 876 B
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  1. </pre><hr>Post-stats<br><pre>
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  3. /usr/share/fsl/5.0/bin/fslmaths stats/zstat1 -mas mask thresh_zstat1
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  5. echo 113935 > thresh_zstat1.vol
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  6. zstat1: DLH=0.206034 VOLUME=113935 RESELS=24.6481
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  8. /usr/share/fsl/5.0/bin/cluster -i thresh_zstat1 -c stats/cope1 -t 1.64 -p 0.05 -d 0.206034 --volume=113935 --othresh=thresh_zstat1 -o cluster_mask_zstat1 --connectivity=26 --mm --olmax=lmax_zstat1_std.txt --scalarname=Z > cluster_zstat1_std.txt
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  10. /usr/share/fsl/5.0/bin/cluster2html . cluster_zstat1 -std
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  12. /usr/share/fsl/5.0/bin/fslstats thresh_zstat1 -l 0.0001 -R 2>/dev/null
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  13. 1.640054 3.386735 
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  14. Rendering using zmin=1.640054 zmax=3.386735
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  16. /usr/share/fsl/5.0/bin/overlay 1 0 example_func -a thresh_zstat1 1.640054 3.386735 rendered_thresh_zstat1
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  18. /usr/share/fsl/5.0/bin/slicer rendered_thresh_zstat1 -S 2 750 rendered_thresh_zstat1.png
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  20. /bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif
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