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cortical-surfaces-freesurfer
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cortical-sur...
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sub-21
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scripts
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recon-all.cmd

recon-all.cmd 1.2 KB
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  1. 

  2.  kvlSegmentHippocampalSubfields.sh sub021 right /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/tmp/subfieldResults 
    3. 

  3. 

  4. 

  5.  cp /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/tmp/subfieldResults/sub021/left/segmentationWithoutPartialVolumingLog/posterior_left* /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/mri 
    6. 

  6. 

  7. 

  8.  cp /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/tmp/subfieldResults/sub021/left/segmentationWithoutPartialVolumingLog/posterior_Left* /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/mri 
    9. 

  9. 

  10. 

  11.  cp /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/tmp/subfieldResults/sub021/right/segmentationWithoutPartialVolumingLog/posterior_right* /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/mri 
    12. 

  12. 

  13. 

  14.  cp /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/tmp/subfieldResults/sub021/right/segmentationWithoutPartialVolumingLog/posterior_Right* /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/mri 
    15. 

  15. 

  16. 

  17.  rm -rf /home/data/exppsy/Field_Strength_Comparison/analysis/Freesurfer/sub021/tmp/subfieldResults 
    18. 

  18.