We use cookies to ensure you get the best experience on our website
Home Explore Help News
Register Sign In
studyforrest
/
cortical-surfaces-freesurfer
5
0
Fork 0
Files Issues 0
Branch: master
Branches Tags
cortical-sur...
/
sub-02
/
stats
/
wmparc.stats

wmparc.stats 11 KB
Permalink History Download

123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133 
  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.75.2.9 2013/02/16 00:09:33 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject sub002 --surf-wm-vol --ctab /opt/freesurfer/5.3.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname snake5
    8. 

  8. # machine  x86_64
    9. 

  9. # user     fkaule
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /home/data/exppsy/forrest_gump/openfmri.org/freesurfer
    13. 

  13. # subjectname sub002
    14. 

  14. # Measure lhCorticalWhiteMatter, lhCorticalWhiteMatterVol, Left hemisphere cortical white matter volume, 272836.406457, mm^3
    15. 

  15. # Measure rhCorticalWhiteMatter, rhCorticalWhiteMatterVol, Right hemisphere cortical white matter volume, 274536.404436, mm^3
    16. 

  16. # Measure CorticalWhiteMatter, CorticalWhiteMatterVol, Total cortical white matter volume, 547372.810893, mm^3
    17. 

  17. # Measure Mask, MaskVol, Mask Volume, 1983181.000000, mm^3
    18. 

  18. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1487795.717544, mm^3
    19. 

  19. # SegVolFile mri/wmparc.mgz 
    20. 

  20. # SegVolFileTimeStamp  2013/08/09 00:58:26 
    21. 

  21. # ColorTable /opt/freesurfer/5.3.0/WMParcStatsLUT.txt 
    22. 

  22. # ColorTableTimeStamp 2013/05/13 23:21:15 
    23. 

  23. # InVolFile  mri/norm.mgz 
    24. 

  24. # InVolFileTimeStamp  2013/08/08 12:05:04 
    25. 

  25. # InVolFrame 0 
    26. 

  26. # PVVolFile  mri/norm.mgz 
    27. 

  27. # PVVolFileTimeStamp  2013/08/08 12:05:04 
    28. 

  28. # ExcludeSegId 0 
    29. 

  29. # Only reporting non-empty segmentations
    30. 

  30. # VoxelVolume_mm3 1 
    31. 

  31. # TableCol  1 ColHeader Index 
    32. 

  32. # TableCol  1 FieldName Index 
    33. 

  33. # TableCol  1 Units     NA 
    34. 

  34. # TableCol  2 ColHeader SegId 
    35. 

  35. # TableCol  2 FieldName Segmentation Id
    36. 

  36. # TableCol  2 Units     NA
    37. 

  37. # TableCol  3 ColHeader NVoxels 
    38. 

  38. # TableCol  3 FieldName Number of Voxels
    39. 

  39. # TableCol  3 Units     unitless
    40. 

  40. # TableCol  4 ColHeader Volume_mm3
    41. 

  41. # TableCol  4 FieldName Volume
    42. 

  42. # TableCol  4 Units     mm^3
    43. 

  43. # TableCol  5 ColHeader StructName
    44. 

  44. # TableCol  5 FieldName Structure Name
    45. 

  45. # TableCol  5 Units     NA
    46. 

  46. # TableCol  6 ColHeader normMean 
    47. 

  47. # TableCol  6 FieldName Intensity normMean
    48. 

  48. # TableCol  6 Units     MR
    49. 

  49. # TableCol  7 ColHeader normStdDev
    50. 

  50. # TableCol  7 FieldName Itensity normStdDev
    51. 

  51. # TableCol  7 Units     MR
    52. 

  52. # TableCol  8 ColHeader normMin
    53. 

  53. # TableCol  8 FieldName Intensity normMin
    54. 

  54. # TableCol  8 Units     MR
    55. 

  55. # TableCol  9 ColHeader normMax
    56. 

  56. # TableCol  9 FieldName Intensity normMax
    57. 

  57. # TableCol  9 Units     MR
    58. 

  58. # TableCol 10 ColHeader normRange
    59. 

  59. # TableCol 10 FieldName Intensity normRange
    60. 

  60. # TableCol 10 Units     MR
    61. 

  61. # NRows 70 
    62. 

  62. # NTableCols 10 
    63. 

  63. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    64. 

  64.   1 3001      3831     3831.1  wm-lh-bankssts                   105.3957     8.8491    70.0000   122.0000    52.0000 
    65. 

  65.   2 3002      3814     3814.4  wm-lh-caudalanteriorcingulate    102.1426     8.1794    46.0000   121.0000    75.0000 
    66. 

  66.   3 3003      7714     7713.7  wm-lh-caudalmiddlefrontal         98.9477     9.8051    61.0000   118.0000    57.0000 
    67. 

  67.   4 3005      2420     2419.6  wm-lh-cuneus                     100.0333     9.6879    68.0000   116.0000    48.0000 
    68. 

  68.   5 3006       768      767.6  wm-lh-entorhinal                  84.5509     8.4656    64.0000   107.0000    43.0000 
    69. 

  69.   6 3007      7569     7568.7  wm-lh-fusiform                    99.3954     9.9363    36.0000   122.0000    86.0000 
    70. 

  70.   7 3008     12322    12321.9  wm-lh-inferiorparietal           106.0605    10.4070    69.0000   132.0000    63.0000 
    71. 

  71.   8 3009      8571     8570.7  wm-lh-inferiortemporal            97.6908    10.8991    57.0000   121.0000    64.0000 
    72. 

  72.   9 3010      5372     5372.3  wm-lh-isthmuscingulate           103.7916    11.4324    14.0000   126.0000   112.0000 
    73. 

  73.  10 3011      8528     8528.1  wm-lh-lateraloccipital            98.5494    10.3537    62.0000   120.0000    58.0000 
    74. 

  74.  11 3012      7503     7503.3  wm-lh-lateralorbitofrontal        97.8522    10.2744    62.0000   123.0000    61.0000 
    75. 

  75.  12 3013      4903     4903.5  wm-lh-lingual                     95.1440    10.3953    22.0000   121.0000    99.0000 
    76. 

  76.  13 3014      4325     4325.3  wm-lh-medialorbitofrontal         93.2574    12.9031    16.0000   120.0000   104.0000 
    77. 

  77.  14 3015      6471     6471.0  wm-lh-middletemporal              94.1614    11.2095    52.0000   120.0000    68.0000 
    78. 

  78.  15 3016      2538     2538.2  wm-lh-parahippocampal             95.5332    10.9887    48.0000   122.0000    74.0000 
    79. 

  79.  16 3017      4375     4375.1  wm-lh-paracentral                 98.6236    10.3398    64.0000   122.0000    58.0000 
    80. 

  80.  17 3018      4565     4565.3  wm-lh-parsopercularis             98.8640     9.0538    70.0000   118.0000    48.0000 
    81. 

  81.  18 3019      1055     1054.9  wm-lh-parsorbitalis               95.7080    10.6405    65.0000   117.0000    52.0000 
    82. 

  82.  19 3020      3587     3586.8  wm-lh-parstriangularis           100.5628     9.1734    59.0000   120.0000    61.0000 
    83. 

  83.  20 3021      2745     2745.4  wm-lh-pericalcarine               93.1565    12.6703     0.0000   117.0000   117.0000 
    84. 

  84.  21 3022      8794     8793.5  wm-lh-postcentral                 97.2288     9.4317    71.0000   124.0000    53.0000 
    85. 

  85.  22 3023      4792     4792.3  wm-lh-posteriorcingulate         104.8044     9.7768    34.0000   123.0000    89.0000 
    86. 

  86.  23 3024     16555    16555.1  wm-lh-precentral                  98.7897     9.3404    66.0000   120.0000    54.0000 
    87. 

  87.  24 3025     14226    14226.5  wm-lh-precuneus                  105.3743     9.2955    14.0000   129.0000   115.0000 
    88. 

  88.  25 3026      2936     2935.5  wm-lh-rostralanteriorcingulate    96.7845    12.8155    17.0000   121.0000   104.0000 
    89. 

  89.  26 3027     17354    17353.8  wm-lh-rostralmiddlefrontal        99.2415    10.4738    58.0000   121.0000    63.0000 
    90. 

  90.  27 3028     23529    23528.6  wm-lh-superiorfrontal             93.3348    11.5610    34.0000   119.0000    85.0000 
    91. 

  91.  28 3029     14729    14729.3  wm-lh-superiorparietal           105.1033     9.6132    64.0000   127.0000    63.0000 
    92. 

  92.  29 3030     10668    10667.6  wm-lh-superiortemporal           100.5148    10.5036    60.0000   124.0000    64.0000 
    93. 

  93.  30 3031     12458    12458.5  wm-lh-supramarginal              104.0282    11.0721    55.0000   126.0000    71.0000 
    94. 

  94.  31 3032       363      363.0  wm-lh-frontalpole                 92.7251    10.5988    69.0000   116.0000    47.0000 
    95. 

  95.  32 3033       986      985.9  wm-lh-temporalpole                87.5763    10.3220    64.0000   113.0000    49.0000 
    96. 

  96.  33 3034       788      788.3  wm-lh-transversetemporal         103.5553     8.0450    80.0000   121.0000    41.0000 
    97. 

  97.  34 3035      9377     9377.2  wm-lh-insula                      97.6907    12.1864    51.0000   125.0000    74.0000 
    98. 

  98.  35 4001      3423     3423.3  wm-rh-bankssts                   104.2400     7.8434    65.0000   122.0000    57.0000 
    99. 

  99.  36 4002      4456     4456.4  wm-rh-caudalanteriorcingulate    102.0651     7.8450    49.0000   120.0000    71.0000 
    100. 

  100.  37 4003      6650     6650.5  wm-rh-caudalmiddlefrontal         93.7674    11.3306    59.0000   120.0000    61.0000 
    101. 

  101.  38 4005      2679     2679.3  wm-rh-cuneus                      99.8125    10.8518    69.0000   120.0000    51.0000 
    102. 

  102.  39 4006       491      490.8  wm-rh-entorhinal                  78.9714     8.7993    55.0000   105.0000    50.0000 
    103. 

  103.  40 4007      8395     8394.6  wm-rh-fusiform                    95.1607    10.3732    61.0000   117.0000    56.0000 
    104. 

  104.  41 4008     15792    15792.0  wm-rh-inferiorparietal           103.3706    10.0163    68.0000   124.0000    56.0000 
    105. 

  105.  42 4009      7249     7249.3  wm-rh-inferiortemporal            91.4848    10.5743    59.0000   118.0000    59.0000 
    106. 

  106.  43 4010      4719     4718.9  wm-rh-isthmuscingulate           104.0328    11.5956    12.0000   131.0000   119.0000 
    107. 

  107.  44 4011      8629     8629.3  wm-rh-lateraloccipital            99.0596     9.4805    63.0000   119.0000    56.0000 
    108. 

  108.  45 4012      6994     6994.0  wm-rh-lateralorbitofrontal       100.4385    10.7917    37.0000   124.0000    87.0000 
    109. 

  109.  46 4013      5119     5118.7  wm-rh-lingual                     93.4080    11.9316     1.0000   117.0000   116.0000 
    110. 

  110.  47 4014      4042     4041.6  wm-rh-medialorbitofrontal         96.5889    11.8000    28.0000   122.0000    94.0000 
    111. 

  111.  48 4015      7586     7586.0  wm-rh-middletemporal              94.9342    10.3981    60.0000   122.0000    62.0000 
    112. 

  112.  49 4016      2100     2099.6  wm-rh-parahippocampal             93.9682     9.9693    45.0000   118.0000    73.0000 
    113. 

  113.  50 4017      5214     5213.9  wm-rh-paracentral                 98.9544     9.9606    56.0000   121.0000    65.0000 
    114. 

  114.  51 4018      5190     5189.8  wm-rh-parsopercularis             97.6538     9.1612    66.0000   116.0000    50.0000 
    115. 

  115.  52 4019      1615     1614.6  wm-rh-parsorbitalis              101.0069    11.1152    72.0000   124.0000    52.0000 
    116. 

  116.  53 4020      4416     4416.2  wm-rh-parstriangularis           100.4307    10.1965    69.0000   122.0000    53.0000 
    117. 

  117.  54 4021      2832     2831.8  wm-rh-pericalcarine               93.6547    10.1006    10.0000   114.0000   104.0000 
    118. 

  118.  55 4022      9337     9336.5  wm-rh-postcentral                 95.8017     9.5690    64.0000   118.0000    54.0000 
    119. 

  119.  56 4023      4697     4697.4  wm-rh-posteriorcingulate         104.6098     9.4654    20.0000   124.0000   104.0000 
    120. 

  120.  57 4024     14892    14892.4  wm-rh-precentral                  96.4968     8.8475    65.0000   118.0000    53.0000 
    121. 

  121.  58 4025     14794    14793.6  wm-rh-precuneus                  104.1026     9.2388    11.0000   124.0000   113.0000 
    122. 

  122.  59 4026      2491     2491.3  wm-rh-rostralanteriorcingulate    96.0352    13.1255    21.0000   121.0000   100.0000 
    123. 

  123.  60 4027     17783    17783.3  wm-rh-rostralmiddlefrontal        97.4074    11.4142    60.0000   128.0000    68.0000 
    124. 

  124.  61 4028     22618    22617.7  wm-rh-superiorfrontal             93.2057    11.0701    41.0000   119.0000    78.0000 
    125. 

  125.  62 4029     14731    14730.8  wm-rh-superiorparietal           103.4049     9.8482    52.0000   124.0000    72.0000 
    126. 

  126.  63 4030      7759     7759.2  wm-rh-superiortemporal            96.8548    10.3625    61.0000   121.0000    60.0000 
    127. 

  127.  64 4031      9730     9730.3  wm-rh-supramarginal              102.8155    10.3029    55.0000   124.0000    69.0000 
    128. 

  128.  65 4032       326      325.7  wm-rh-frontalpole                 88.0031    10.3138    66.0000   109.0000    43.0000 
    129. 

  129.  66 4033       679      678.8  wm-rh-temporalpole                82.8605     8.7341    58.0000   103.0000    45.0000 
    130. 

  130.  67 4034       550      550.3  wm-rh-transversetemporal          99.3284     7.4578    79.0000   114.0000    35.0000 
    131. 

  131.  68 4035     10108    10108.3  wm-rh-insula                      94.8316    11.4407    52.0000   123.0000    71.0000 
    132. 

  132.  69 5001     35120    35119.6  Left-UnsegmentedWhiteMatter      104.1621    10.5061    15.0000   128.0000   113.0000 
    133. 

  133.  70 5002     38429    38428.8  Right-UnsegmentedWhiteMatter     102.8682     9.6557     7.0000   126.0000   119.0000 
    134.