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- </style><body><header><h1><a class="white" href="https://templates.g-node.org/templates.xml">odML metadata document</a></h1></header><div class="navWrapper"><navigationContainer><div id="navigationContainer"><hr class="fatline" /><p><h2>Document info</h2><b>Author: </b><xsl:if test="author"><xsl:value-of select="author"/></xsl:if><br/><b>Date: </b><xsl:if test="date"><xsl:value-of select="date"/></xsl:if><br/><b>Version: </b><xsl:if test="version"><xsl:value-of select="version"/></xsl:if><br/><b>Repository: </b><xsl:if test="repository"><xsl:value-of select="repository"/></xsl:if><br/></p><hr class="fatline" /><h2>Structure</h2><font size ="-1" ><xsl:if test="section"><xsl:for-each select="section"><xsl:call-template name="sectionTemplate"><xsl:with-param name="navigation">1</xsl:with-param><xsl:with-param name="anchorBase">Sec</xsl:with-param><xsl:with-param name="url" select="$repository"/></xsl:call-template></xsl:for-each></xsl:if></font><br/></div><div id="contentContainer"><hr class="fatline" /><h2>Content</h2><xsl:if test="section"><xsl:for-each select="section"><xsl:call-template name="sectionTemplate"><xsl:with-param name="navigation">0</xsl:with-param><xsl:with-param name="anchorBase">Sec</xsl:with-param><xsl:with-param name="url" select="$repository"/></xsl:call-template></xsl:for-each></xsl:if></div></navigationContainer></div></body></html></xsl:template><xsl:template name="sectionTemplate" match="section"><xsl:param name="navigation"/><xsl:param name="anchorBase"/><xsl:param name="url"/><xsl:variable name="anchorName" select="concat($anchorBase,position())"/><xsl:variable name="repository"><xsl:choose><xsl:when test="repository"><xsl:value-of select ="repository"/></xsl:when><xsl:otherwise><xsl:value-of select ="$url"/></xsl:otherwise></xsl:choose></xsl:variable><xsl:choose><xsl:when test="$navigation = 1"><ol class="nested"><font size="normal"><a href="#{$anchorName}"><xsl:value-of select="name"/> (type: <xsl:value-of select="type"/>)</a></font><xsl:if test="section"><xsl:for-each select="section"><xsl:call-template name="sectionTemplate"><xsl:with-param name="navigation" select="$navigation"/><xsl:with-param name="anchorBase" select="concat($anchorName,'SubSec')"/><xsl:with-param name="url" select="$repository"/></xsl:call-template></xsl:for-each></xsl:if></ol></xsl:when><xsl:otherwise><a name="{$anchorName}"><h3><xsl:value-of select="name"/> Section</h3></a><p><b>Type: </b><xsl:value-of select="type"/><br/><xsl:choose><xsl:when test ="repository"><b>Repository: </b><xsl:value-of select="repository"/><br/></xsl:when><xsl:otherwise><b>Repository: </b><xsl:value-of select="$repository"/><br/></xsl:otherwise></xsl:choose><b>Link: </b><xsl:if test="link"><xsl:value-of select="link"/></xsl:if><br/><b>Include:</b><xsl:if test="include"><font color="red"><xsl:value-of select="include"/></font></xsl:if><br/><b>Definition: </b><xsl:if test="definition"><xsl:value-of select="definition"/></xsl:if><br/></p><xsl:if test="property"><table border="1" rules="rows" width="100%"><font size="-1"><tr bgcolor="#336699" align="left" valign="middle"><th><font size="+1" color="white"><b>Name</b></font></th><th><font size="+1" color="white"><b>Value</b></font></th><th><font size="+1" color="white"><b>Unit</b></font></th><th><font size="+1" color="white"><b>Type</b></font></th><th><font size="+1" color="white"><b>Uncertainty</b></font></th><th><font size="+1" color="white"><b>Definition</b></font></th><th><font size="+1" color="white"><b>Dependency</b></font></th><th><font size="+1" color="white"><b>Dependency Value</b></font></th></tr><xsl:for-each select="property"><xsl:variable name="anchor"><xsl:value-of select ="name"/></xsl:variable><tr><td width="15%"><a name="{$anchor}"/><p><xsl:value-of select="name"/></p></td><td width="10%"><p><xsl:value-of select="value"/></p></td><td width="5%"><p><xsl:value-of select="unit"/><br/></p></td><td width="5%"><p><xsl:value-of select="type"/></p></td><td width="5%"><p><xsl:value-of select="uncertainty"/><br/></p></td><td width="22.5%"><p><xsl:value-of select="definition"/></p></td><td width="5%"><p><xsl:value-of select="dependency"/></p></td><td width="5%"><p><xsl:value-of select="dependencyValue"/></p></td></tr></xsl:for-each></font></table></xsl:if><a href="#top"><tiny>top</tiny></a><hr class="thinline" /><xsl:if test="section"><xsl:for-each select="section"><xsl:call-template name="sectionTemplate"><xsl:with-param name="navigation" select="$navigation"/><xsl:with-param name="anchorBase" select="concat($anchorName,'SubSec')"/><xsl:with-param name="url" select="$repository"/></xsl:call-template></xsl:for-each></xsl:if></xsl:otherwise></xsl:choose></xsl:template>
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- <id>e4873bfe-e23d-4f64-bccb-159424191d81</id>
- <section>
- <id>ca57742c-a757-4eeb-bdde-43688ad8997b</id>
- <type>setup/daq/hardware</type>
- <name>UtahArray</name>
- <definition>Information on the Blackrock Utah Electrode Array</definition>
- <section>
- <id>f1820b8f-ba41-4485-9765-7e457312e0f9</id>
- <type>setup/daq/hardware</type>
- <name>Connector</name>
- <definition>Information on the used connector</definition>
- <property>
- <id>a6379d66-964e-43f5-acbe-e315eea10c23</id>
- <name>Style</name>
- <value>CerePort</value>
- <definition>Style of the connector</definition>
- <type>string</type>
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- <property>
- <id>e2bbf96d-2d85-4065-a61e-b4d38451c66f</id>
- <name>Height</name>
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- <unit>mm</unit>
- <definition>Height of the connector</definition>
- <type>float</type>
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- <property>
- <id>5666d580-3cfd-4e00-b9e0-0f6343276413</id>
- <name>DiameterBase</name>
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- <definition>Diameter of the base of the connector</definition>
- <type>float</type>
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- <property>
- <id>db43bc6a-0376-4214-8840-b1c889a76b98</id>
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- <property>
- <id>fd4ef4b3-5c7c-487a-b2f2-78795fe038f1</id>
- <name>ImplantType</name>
- <value>chronic</value>
- <definition>Type of implantation</definition>
- <type>string</type>
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- <property>
- <id>f084c754-2aa3-4f9e-9f6d-93228a4cf3a3</id>
- <name>SkullMount</name>
- <value>bone screws</value>
- <definition>Type of mounting to the skull</definition>
- <type>string</type>
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- </section>
- <section>
- <id>33b83533-0c06-416c-afec-2e299c50791d</id>
- <type>setup/daq/hardware</type>
- <name>Array</name>
- <definition>Information on the used array</definition>
- <section>
- <id>dcdf7bda-5dd5-4139-b41c-f0e626b4ba7c</id>
- <type>setup/daq/hardware</type>
- <name>Grid_01</name>
- <definition>Information on array grid</definition>
- <property>
- <id>52b8791c-89bd-467c-989d-5b5469da32b1</id>
- <name>ID</name>
- <value>1</value>
- <definition>Grid ID</definition>
- <type>int</type>
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- <property>
- <id>f44fd3f4-fa42-4713-aa60-d520f4087b5e</id>
- <name>ElectrodeGeometry</name>
- <value>flat</value>
- <definition>Geometry of the electrode lengths</definition>
- <type>string</type>
- </property>
- <property>
- <id>b69380dc-4ddc-4060-9083-ca3b2cc98505</id>
- <name>ElectrodeMetal</name>
- <value>iridium oxide</value>
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- <type>string</type>
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- <property>
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- <name>ElectrodePitch</name>
- <value>400.0</value>
- <unit>um</unit>
- <definition>Inter-electrode-distance</definition>
- <type>float</type>
- </property>
- <property>
- <id>f47a7ae7-8da2-495c-b0e3-77373157d493</id>
- <name>Insulation</name>
- <value>Parylene-C</value>
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- <type>string</type>
- </property>
- <property>
- <id>dc81f7c4-e98a-4a38-968a-87d2e60584bc</id>
- <name>GridRows</name>
- <value>10</value>
- <definition>Number of electrode rows</definition>
- <type>int</type>
- </property>
- <property>
- <id>81424f45-3e75-4aa8-b5ac-ff710e548d99</id>
- <name>GridColumns</name>
- <value>10</value>
- <definition>Number of electrode columns</definition>
- <type>int</type>
- </property>
- <property>
- <id>6f46976c-c371-4718-9a26-3b67a15929f9</id>
- <name>GridWidth</name>
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- <unit>mm</unit>
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- <property>
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- <type>float</type>
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- <property>
- <id>82be0787-b01f-4999-b89a-a2733d770da6</id>
- <name>ElectrodeCount</name>
- <value>100</value>
- <definition>Total number of electrodes</definition>
- <type>int</type>
- </property>
- <property>
- <id>7d46857f-04c6-4753-9368-80b3041856a4</id>
- <name>ActiveElectrodeCount</name>
- <value>96</value>
- <definition>Number of connected/active electrodes</definition>
- <type>int</type>
- </property>
- </section>
- <section>
- <id>e363685a-e701-40e4-80e3-fa93678b7461</id>
- <type>setup/daq/hardware</type>
- <name>Electrode_001</name>
- <definition>Information on electrode</definition>
- <section>
- <id>e9949a06-9f7b-45f8-a958-bea6cf4de4c4</id>
- <type>setup/daq/preprocessing</type>
- <name>OfflineSpikeSorting</name>
- <definition>Information on the spike sorting performed offline, after the experiment</definition>
- <section>
- <id>a895da7b-28c1-43ae-a220-ff08a3c69449</id>
- <type>setup/daq</type>
- <name>Unit_01</name>
- <definition>Information on the waveforms of the corresponding unit</definition>
- <property>
- <id>c574c1c3-a451-40e5-83fe-7f326ac7e172</id>
- <name>SpikeCount</name>
- <value>14348</value>
- <definition>Number of extracted waveforms (spikes) for unit</definition>
- <type>int</type>
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- <property>
- <id>14c068dc-21e0-4526-a2c8-166c99a84cde</id>
- <name>SpikeAmplitude</name>
- <value>491.863744076</value>
- <unit>mV</unit>
- <definition>Measured averaged amplitude of spike waveforms for unit</definition>
- <type>float</type>
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- <property>
- <id>ee13d795-b175-4901-a356-19c9d945ffa4</id>
- <name>SpikeDuration</name>
- <value>500.0</value>
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- <type>float</type>
- </property>
- <property>
- <id>4ef8227e-d3ef-4922-998d-9c6d9e4237e6</id>
- <name>SNR</name>
- <value>3.91557060153</value>
- <definition>Signal-to-noise ratio of unit waveforms, measured SNR value in analogy to Hatsopoulos N, Joshi J, O'Leary JG (2004) Decoding continuous and discrete motor behaviors using motor and premotor cortical ensembles. J Neurophysiol 92:1165-1174 and Suner S, Fellows MR, Vargas-Irwin C, Nakata GK, Donoghue JP (2005) Reliability of signals from a chronically ilplanted, silicon-based electrode array in non-human primate primary motor cortex. IEEE Trans Neural Syst Rehabil Eng 13:524-541.</definition>
- <type>float</type>
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- </section>
- <section>
- <id>5e7d0723-368c-45e6-9e7b-41386b909f1e</id>
- <type>setup/daq</type>
- <name>Unit_02</name>
- <definition>Information on the waveforms of the corresponding unit</definition>
- <property>
- <id>aa185235-6ca2-4ed1-9297-03d59c6ef025</id>
- <name>SpikeCount</name>
- <value>952</value>
- <definition>Number of extracted waveforms (spikes) for unit</definition>
- <type>int</type>
- </property>
- <property>
- <id>9a8a5852-36e3-4e0f-a0d0-b3110ea45a4a</id>
- <name>SpikeAmplitude</name>
- <value>763.106092437</value>
- <unit>mV</unit>
- <definition>Measured averaged amplitude of spike waveforms for unit</definition>
- <type>float</type>
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- <property>
- <id>9f253a79-50e5-4658-85a0-0a1c724e2161</id>
- <name>SpikeDuration</name>
- <value>533.333333333</value>
- <unit>us</unit>
- <definition>Measured averaged duration of spike waveforms unit</definition>
- <type>float</type>
- </property>
- <property>
- <id>4e6df8dd-22c5-4b8d-8dee-736947e21652</id>
- <name>SNR</name>
- <value>5.93768897126</value>
- <definition>Signal-to-noise ratio of unit waveforms, measured SNR value in analogy to Hatsopoulos N, Joshi J, O'Leary JG (2004) Decoding continuous and discrete motor behaviors using motor and premotor cortical ensembles. J Neurophysiol 92:1165-1174 and Suner S, Fellows MR, Vargas-Irwin C, Nakata GK, Donoghue JP (2005) Reliability of signals from a chronically ilplanted, silicon-based electrode array in non-human primate primary motor cortex. IEEE Trans Neural Syst Rehabil Eng 13:524-541.</definition>
- <type>float</type>
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- <property>
- <id>6f1636cd-510d-455a-aa1a-7865ccdf42a8</id>
- <name>SUAIDs</name>
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- <definition>IDs of single unit activity</definition>
- <type>int</type>
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