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@@ -953,18 +953,25 @@ class ReachGraspIO(BlackrockIO):
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def __annotate_channel_infos(self, block):
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if self.odmldoc:
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+
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+ # updating array annotations of neuronal analogsignals
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+ for seg in block.segments:
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+ for obj in seg.analogsignals:
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+ if 'neural_signal' in obj.annotations and obj.annotations[
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+ 'neural_signal'] and 'channel_ids' in obj.array_annotations:
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+ chids = obj.array_annotations['channel_ids']
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+ ca_ids, *coordinates = self.__convert_chids_and_coordinates(chids)
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+ obj.array_annotations.update(dict(connector_aligned_ids=ca_ids,
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+ coordinates_x=coordinates[0],
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+ coordinates_y=coordinates[1]))
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+
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+ # updating annotations of groups and spiketrains
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objs = block.groups
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for seg in block.segments:
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- objs.extend(seg.analogsignals + seg.spiketrains)
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+ objs.extend(seg.spiketrains)
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for obj in objs:
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- if hasattr(obj, 'array_annotations') and ('channel_ids' in obj.array_annotations):
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- chids = obj.array_annotations['channel_ids']
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- ca_ids, *coordinates = self.__convert_chids_and_coordinates(chids)
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- obj.array_annotations.update(dict(connector_aligned_ids=ca_ids,
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- coordinates_x=coordinates[0],
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- coordinates_y=coordinates[1]))
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- elif 'channel_id' in obj.annotations:
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+ if 'channel_id' in obj.annotations:
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chid = obj.annotations['channel_id']
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ca_id, *coordinates = self.__convert_chids_and_coordinates([chid])
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obj.annotate(connector_aligned_id=ca_id[0],
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