Quellcode durchsuchen

adds functional data for sub-11773

Denis Schluppeck vor 3 Jahren
Ursprung
Commit
ade26ee8a5

+ 1 - 0
.bidsignore

@@ -0,0 +1 @@
+**/*_b0_blip.*

+ 1 - 0
.gitignore

@@ -0,0 +1 @@
+**DS_Store

+ 11 - 0
sub-11773/ses-1/func/sub-11773_ses-1_task-rings0_acq-TR2000_events.tsv

@@ -0,0 +1,11 @@
+onset	duration	trial_type
+0	24	ring_cycle
+24	24	ring_cycle
+48	24	ring_cycle
+72	24	ring_cycle
+96	24	ring_cycle
+120	24	ring_cycle
+144	24	ring_cycle
+168	24	ring_cycle
+192	24	ring_cycle
+216	24	ring_cycle

+ 53 - 0
sub-11773/ses-1/func/sub-11773_ses-1_task-rings0_acq-TR2000_run-1_bold.json

@@ -0,0 +1,53 @@
+{
+	"TaskName": "rings0",
+	"Modality": "MR",
+	"MagneticFieldStrength": 3,
+	"ImagingFrequency": 127.791,
+	"Manufacturer": "Philips",
+	"ManufacturersModelName": "Achieva",
+	"InstitutionName": "SPMMRC_Nottingham",
+	"InstitutionalDepartmentName": "MRI",
+	"DeviceSerialNumber": "17057",
+	"StationName": "SPMMRC3T",
+	"BodyPartExamined": "BRAIN",
+	"PatientPosition": "HFS",
+	"ProcedureStepDescription": "I_6_2009",
+	"SoftwareVersions": "3.2.1_3.2.1.1",
+	"MRAcquisitionType": "2D",
+	"SeriesDescription": "fMRI_SENSE",
+	"ProtocolName": "WIP_fMRI_SENSE_SENSE",
+	"ScanningSequence": "GR",
+	"SequenceVariant": "SK",
+	"ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"],
+	"SeriesNumber": 801,
+	"AcquisitionTime": "11:50:43.600000",
+	"AcquisitionNumber": 8,
+	"PhilipsRescaleSlope": 8.38926,
+	"PhilipsRescaleIntercept": 0,
+	"PhilipsScaleSlope": 0.00116544,
+	"UsePhilipsFloatNotDisplayScaling": 1,
+	"SliceThickness": 3,
+	"SpacingBetweenSlices": 3,
+	"EchoTime": 0.035,
+	"RepetitionTime": 2,
+	"FlipAngle": 75,
+	"CoilString": "Dual_coil",
+	"PartialFourier": 0.546875,
+	"PercentPhaseFOV": 100,
+	"EchoTrainLength": 35,
+	"PhaseEncodingSteps": 64,
+	"AcquisitionMatrixPE": 64,
+	"ReconMatrixPE": 64,
+	"PixelBandwidth": 2662.41,
+	"PhaseEncodingAxis": "i",
+	"ImageOrientationPatientDICOM": [
+		0.999615,
+		-0.0264032,
+		-0.00856212,
+		0.0213809,
+		0.929155,
+		-0.369071	],
+	"InPlanePhaseEncodingDirectionDICOM": "ROW",
+	"ConversionSoftware": "dcm2niix",
+	"ConversionSoftwareVersion": "v1.0.20181125  (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0"
+}

BIN
sub-11773/ses-1/func/sub-11773_ses-1_task-rings0_acq-TR2000_run-1_bold.nii.gz


+ 12 - 0
sub-11773/ses-1/func/sub-11773_ses-1_task-rings1_acq-TR2000_events.tsv

@@ -0,0 +1,12 @@
+onset	duration	trial_type
+0	12	init half cycle
+12	24	ring_cycle
+36	24	ring_cycle
+60	24	ring_cycle
+84	24	ring_cycle
+108	24	ring_cycle
+132	24	ring_cycle
+156	24	ring_cycle
+180	24	ring_cycle
+204	24	ring_cycle
+228	24	ring_cycle

+ 53 - 0
sub-11773/ses-1/func/sub-11773_ses-1_task-rings1_acq-TR2000_run-1_bold.json

@@ -0,0 +1,53 @@
+{	
+	"TaskName": "rings1",
+	"Modality": "MR",
+	"MagneticFieldStrength": 3,
+	"ImagingFrequency": 127.791,
+	"Manufacturer": "Philips",
+	"ManufacturersModelName": "Achieva",
+	"InstitutionName": "SPMMRC_Nottingham",
+	"InstitutionalDepartmentName": "MRI",
+	"DeviceSerialNumber": "17057",
+	"StationName": "SPMMRC3T",
+	"BodyPartExamined": "BRAIN",
+	"PatientPosition": "HFS",
+	"ProcedureStepDescription": "I_6_2009",
+	"SoftwareVersions": "3.2.1_3.2.1.1",
+	"MRAcquisitionType": "2D",
+	"SeriesDescription": "fMRI_SENSE",
+	"ProtocolName": "WIP_fMRI_SENSE_SENSE",
+	"ScanningSequence": "GR",
+	"SequenceVariant": "SK",
+	"ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"],
+	"SeriesNumber": 1001,
+	"AcquisitionTime": "12:01:6.910000",
+	"AcquisitionNumber": 10,
+	"PhilipsRescaleSlope": 12.6999,
+	"PhilipsRescaleIntercept": 0,
+	"PhilipsScaleSlope": 0.00116907,
+	"UsePhilipsFloatNotDisplayScaling": 1,
+	"SliceThickness": 3,
+	"SpacingBetweenSlices": 3,
+	"EchoTime": 0.035,
+	"RepetitionTime": 2,
+	"FlipAngle": 75,
+	"CoilString": "Dual_coil",
+	"PartialFourier": 0.546875,
+	"PercentPhaseFOV": 100,
+	"EchoTrainLength": 35,
+	"PhaseEncodingSteps": 64,
+	"AcquisitionMatrixPE": 64,
+	"ReconMatrixPE": 64,
+	"PixelBandwidth": 2662.41,
+	"PhaseEncodingAxis": "i",
+	"ImageOrientationPatientDICOM": [
+		0.999615,
+		-0.0264032,
+		-0.00856212,
+		0.0213809,
+		0.929155,
+		-0.369071	],
+	"InPlanePhaseEncodingDirectionDICOM": "ROW",
+	"ConversionSoftware": "dcm2niix",
+	"ConversionSoftwareVersion": "v1.0.20181125  (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0"
+}

BIN
sub-11773/ses-1/func/sub-11773_ses-1_task-rings1_acq-TR2000_run-1_bold.nii.gz


+ 53 - 0
sub-11773/ses-1/func/sub-11773_ses-1_task-rings1_acq-TR2000_run-2_bold.json

@@ -0,0 +1,53 @@
+{
+	"TaskName": "rings1",
+	"Modality": "MR",
+	"MagneticFieldStrength": 3,
+	"ImagingFrequency": 127.791,
+	"Manufacturer": "Philips",
+	"ManufacturersModelName": "Achieva",
+	"InstitutionName": "SPMMRC_Nottingham",
+	"InstitutionalDepartmentName": "MRI",
+	"DeviceSerialNumber": "17057",
+	"StationName": "SPMMRC3T",
+	"BodyPartExamined": "BRAIN",
+	"PatientPosition": "HFS",
+	"ProcedureStepDescription": "I_6_2009",
+	"SoftwareVersions": "3.2.1_3.2.1.1",
+	"MRAcquisitionType": "2D",
+	"SeriesDescription": "fMRI_SENSE",
+	"ProtocolName": "WIP_fMRI_SENSE_SENSE",
+	"ScanningSequence": "GR",
+	"SequenceVariant": "SK",
+	"ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"],
+	"SeriesNumber": 1201,
+	"AcquisitionTime": "12:11:11.630000",
+	"AcquisitionNumber": 12,
+	"PhilipsRescaleSlope": 16.0371,
+	"PhilipsRescaleIntercept": 0,
+	"PhilipsScaleSlope": 0.00117524,
+	"UsePhilipsFloatNotDisplayScaling": 1,
+	"SliceThickness": 3,
+	"SpacingBetweenSlices": 3,
+	"EchoTime": 0.035,
+	"RepetitionTime": 2,
+	"FlipAngle": 75,
+	"CoilString": "Dual_coil",
+	"PartialFourier": 0.546875,
+	"PercentPhaseFOV": 100,
+	"EchoTrainLength": 35,
+	"PhaseEncodingSteps": 64,
+	"AcquisitionMatrixPE": 64,
+	"ReconMatrixPE": 64,
+	"PixelBandwidth": 2662.41,
+	"PhaseEncodingAxis": "i",
+	"ImageOrientationPatientDICOM": [
+		0.999615,
+		-0.0264032,
+		-0.00856212,
+		0.0213809,
+		0.929155,
+		-0.369071	],
+	"InPlanePhaseEncodingDirectionDICOM": "ROW",
+	"ConversionSoftware": "dcm2niix",
+	"ConversionSoftwareVersion": "v1.0.20181125  (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0"
+}

BIN
sub-11773/ses-1/func/sub-11773_ses-1_task-rings1_acq-TR2000_run-2_bold.nii.gz


+ 12 - 0
sub-11773/ses-1/func/sub-11773_ses-1_task-wedges1_acq-TR2000_events.tsv

@@ -0,0 +1,12 @@
+onset	duration	trial_type
+0	12	init half cycle
+12	24	wedge_cycle
+36	24	wedge_cycle
+60	24	wedge_cycle
+84	24	wedge_cycle
+108	24	wedge_cycle
+132	24	wedge_cycle
+156	24	wedge_cycle
+180	24	wedge_cycle
+204	24	wedge_cycle
+228	24	wedge_cycle

+ 53 - 0
sub-11773/ses-1/func/sub-11773_ses-1_task-wedges1_acq-TR2000_run-1_bold.json

@@ -0,0 +1,53 @@
+{
+	"TaskName": "wedges1",
+	"Modality": "MR",
+	"MagneticFieldStrength": 3,
+	"ImagingFrequency": 127.791,
+	"Manufacturer": "Philips",
+	"ManufacturersModelName": "Achieva",
+	"InstitutionName": "SPMMRC_Nottingham",
+	"InstitutionalDepartmentName": "MRI",
+	"DeviceSerialNumber": "17057",
+	"StationName": "SPMMRC3T",
+	"BodyPartExamined": "BRAIN",
+	"PatientPosition": "HFS",
+	"ProcedureStepDescription": "I_6_2009",
+	"SoftwareVersions": "3.2.1_3.2.1.1",
+	"MRAcquisitionType": "2D",
+	"SeriesDescription": "fMRI_SENSE",
+	"ProtocolName": "WIP_fMRI_SENSE_SENSE",
+	"ScanningSequence": "GR",
+	"SequenceVariant": "SK",
+	"ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"],
+	"SeriesNumber": 901,
+	"AcquisitionTime": "11:55:57.890000",
+	"AcquisitionNumber": 9,
+	"PhilipsRescaleSlope": 16.3099,
+	"PhilipsRescaleIntercept": 0,
+	"PhilipsScaleSlope": 0.00116894,
+	"UsePhilipsFloatNotDisplayScaling": 1,
+	"SliceThickness": 3,
+	"SpacingBetweenSlices": 3,
+	"EchoTime": 0.035,
+	"RepetitionTime": 2,
+	"FlipAngle": 75,
+	"CoilString": "Dual_coil",
+	"PartialFourier": 0.546875,
+	"PercentPhaseFOV": 100,
+	"EchoTrainLength": 35,
+	"PhaseEncodingSteps": 64,
+	"AcquisitionMatrixPE": 64,
+	"ReconMatrixPE": 64,
+	"PixelBandwidth": 2662.41,
+	"PhaseEncodingAxis": "i",
+	"ImageOrientationPatientDICOM": [
+		0.999615,
+		-0.0264032,
+		-0.00856212,
+		0.0213809,
+		0.929155,
+		-0.369071	],
+	"InPlanePhaseEncodingDirectionDICOM": "ROW",
+	"ConversionSoftware": "dcm2niix",
+	"ConversionSoftwareVersion": "v1.0.20181125  (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0"
+}

BIN
sub-11773/ses-1/func/sub-11773_ses-1_task-wedges1_acq-TR2000_run-1_bold.nii.gz


+ 53 - 0
sub-11773/ses-1/func/sub-11773_ses-1_task-wedges1_acq-TR2000_run-2_bold.json

@@ -0,0 +1,53 @@
+{	
+	"TaskName": "wedges1",
+	"Modality": "MR",
+	"MagneticFieldStrength": 3,
+	"ImagingFrequency": 127.791,
+	"Manufacturer": "Philips",
+	"ManufacturersModelName": "Achieva",
+	"InstitutionName": "SPMMRC_Nottingham",
+	"InstitutionalDepartmentName": "MRI",
+	"DeviceSerialNumber": "17057",
+	"StationName": "SPMMRC3T",
+	"BodyPartExamined": "BRAIN",
+	"PatientPosition": "HFS",
+	"ProcedureStepDescription": "I_6_2009",
+	"SoftwareVersions": "3.2.1_3.2.1.1",
+	"MRAcquisitionType": "2D",
+	"SeriesDescription": "fMRI_SENSE",
+	"ProtocolName": "WIP_fMRI_SENSE_SENSE",
+	"ScanningSequence": "GR",
+	"SequenceVariant": "SK",
+	"ImageType": ["ORIGINAL", "PRIMARY", "M", "FFE", "M", "FFE"],
+	"SeriesNumber": 1101,
+	"AcquisitionTime": "12:06:10.190000",
+	"AcquisitionNumber": 11,
+	"PhilipsRescaleSlope": 15.1531,
+	"PhilipsRescaleIntercept": 0,
+	"PhilipsScaleSlope": 0.00116085,
+	"UsePhilipsFloatNotDisplayScaling": 1,
+	"SliceThickness": 3,
+	"SpacingBetweenSlices": 3,
+	"EchoTime": 0.035,
+	"RepetitionTime": 2,
+	"FlipAngle": 75,
+	"CoilString": "Dual_coil",
+	"PartialFourier": 0.546875,
+	"PercentPhaseFOV": 100,
+	"EchoTrainLength": 35,
+	"PhaseEncodingSteps": 64,
+	"AcquisitionMatrixPE": 64,
+	"ReconMatrixPE": 64,
+	"PixelBandwidth": 2662.41,
+	"PhaseEncodingAxis": "i",
+	"ImageOrientationPatientDICOM": [
+		0.999615,
+		-0.0264032,
+		-0.00856212,
+		0.0213809,
+		0.929155,
+		-0.369071	],
+	"InPlanePhaseEncodingDirectionDICOM": "ROW",
+	"ConversionSoftware": "dcm2niix",
+	"ConversionSoftwareVersion": "v1.0.20181125  (JP2:OpenJPEG) (JP-LS:CharLS) Clang8.1.0"
+}

BIN
sub-11773/ses-1/func/sub-11773_ses-1_task-wedges1_acq-TR2000_run-2_bold.nii.gz