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0051370
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051370 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-578
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051370
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 14710.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 269685.053190, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 262013.224576, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 531698.277766, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1826518.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1677741.752475, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 04:26:57 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 17:35:05 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 17:35:05 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2713     2732.1  wm-lh-bankssts                   100.5142     8.5430    69.0000   124.0000    55.0000 
    66. 

  66.   2 3002      2782     2725.1  wm-lh-caudalanteriorcingulate    101.5870     8.3199    53.0000   126.0000    73.0000 
    67. 

  67.   3 3003      6371     6419.4  wm-lh-caudalmiddlefrontal         97.9744     8.9042    56.0000   126.0000    70.0000 
    68. 

  68.   4 3005      2423     2461.0  wm-lh-cuneus                      86.2930     8.8597    57.0000   110.0000    53.0000 
    69. 

  69.   5 3006      1162     1179.6  wm-lh-entorhinal                  83.9957     8.5964    61.0000   112.0000    51.0000 
    70. 

  70.   6 3007      8243     8248.9  wm-lh-fusiform                    91.9233     9.4031    51.0000   119.0000    68.0000 
    71. 

  71.   7 3008     11868    12041.8  wm-lh-inferiorparietal            97.5014     9.1900    33.0000   122.0000    89.0000 
    72. 

  72.   8 3009      6600     6697.1  wm-lh-inferiortemporal            89.7974     9.9502    56.0000   118.0000    62.0000 
    73. 

  73.   9 3010      4141     4158.5  wm-lh-isthmuscingulate           102.3717     9.3714    24.0000   129.0000   105.0000 
    74. 

  74.  10 3011      9866    10146.2  wm-lh-lateraloccipital            85.9869     9.2640    55.0000   112.0000    57.0000 
    75. 

  75.  11 3012      7952     7928.6  wm-lh-lateralorbitofrontal        96.1566     9.3917    61.0000   121.0000    60.0000 
    76. 

  76.  12 3013      4827     4861.6  wm-lh-lingual                     85.9973    11.9453     1.0000   121.0000   120.0000 
    77. 

  77.  13 3014      5091     5074.9  wm-lh-medialorbitofrontal         96.4044    11.4479    15.0000   123.0000   108.0000 
    78. 

  78.  14 3015      7098     7242.6  wm-lh-middletemporal              92.5187     9.9106    63.0000   123.0000    60.0000 
    79. 

  79.  15 3016      1884     1902.4  wm-lh-parahippocampal             91.3747     9.5872    30.0000   118.0000    88.0000 
    80. 

  80.  16 3017      5265     5288.4  wm-lh-paracentral                 99.8097     8.9174    64.0000   124.0000    60.0000 
    81. 

  81.  17 3018      4706     4735.8  wm-lh-parsopercularis             95.3413     8.6444    68.0000   119.0000    51.0000 
    82. 

  82.  18 3019      1273     1283.7  wm-lh-parsorbitalis               88.4093     9.0886    64.0000   112.0000    48.0000 
    83. 

  83.  19 3020      3315     3299.5  wm-lh-parstriangularis            93.8914     9.2075    60.0000   119.0000    59.0000 
    84. 

  84.  20 3021      2631     2491.2  wm-lh-pericalcarine               82.0726     9.7479     6.0000   114.0000   108.0000 
    85. 

  85.  21 3022      8243     8520.2  wm-lh-postcentral                 97.6920     9.4895    65.0000   128.0000    63.0000 
    86. 

  86.  22 3023      4696     4654.9  wm-lh-posteriorcingulate         103.0577     9.1078    47.0000   127.0000    80.0000 
    87. 

  87.  23 3024     15404    15528.1  wm-lh-precentral                  98.7471     8.5065    69.0000   131.0000    62.0000 
    88. 

  88.  24 3025     13230    13216.7  wm-lh-precuneus                   99.0341     9.0712    47.0000   126.0000    79.0000 
    89. 

  89.  25 3026      3921     3878.2  wm-lh-rostralanteriorcingulate    97.7763    13.9418    31.0000   143.0000   112.0000 
    90. 

  90.  26 3027     16802    16820.9  wm-lh-rostralmiddlefrontal        96.2851     9.4212    64.0000   121.0000    57.0000 
    91. 

  91.  27 3028     23538    23699.4  wm-lh-superiorfrontal             96.1643     8.9188    65.0000   124.0000    59.0000 
    92. 

  92.  28 3029     14275    14493.6  wm-lh-superiorparietal            97.9099     9.1990    41.0000   128.0000    87.0000 
    93. 

  93.  29 3030      9562     9808.8  wm-lh-superiortemporal            96.3146    10.2384    63.0000   128.0000    65.0000 
    94. 

  94.  30 3031      9535     9668.5  wm-lh-supramarginal              101.6880     9.6961    65.0000   131.0000    66.0000 
    95. 

  95.  31 3032       327      324.3  wm-lh-frontalpole                 96.2447     9.6666    71.0000   120.0000    49.0000 
    96. 

  96.  32 3033       685      728.2  wm-lh-temporalpole                78.8540     7.7423    49.0000    99.0000    50.0000 
    97. 

  97.  33 3034       857      843.6  wm-lh-transversetemporal          96.2987     8.0390    74.0000   122.0000    48.0000 
    98. 

  98.  34 3035     11799    11640.0  wm-lh-insula                      93.5514    11.5393    39.0000   128.0000    89.0000 
    99. 

  99.  35 4001      2295     2280.3  wm-rh-bankssts                    88.6806     7.1264    65.0000   109.0000    44.0000 
    100. 

  100.  36 4002      3120     3134.5  wm-rh-caudalanteriorcingulate    102.5647     7.8654    70.0000   125.0000    55.0000 
    101. 

  101.  37 4003      7405     7526.2  wm-rh-caudalmiddlefrontal         95.9294     8.1058    70.0000   122.0000    52.0000 
    102. 

  102.  38 4005      2458     2533.0  wm-rh-cuneus                      85.9894     7.8333    64.0000   107.0000    43.0000 
    103. 

  103.  39 4006       661      677.3  wm-rh-entorhinal                  78.0862     7.9449    58.0000   104.0000    46.0000 
    104. 

  104.  40 4007      7930     7921.8  wm-rh-fusiform                    81.0267     7.2843    54.0000   104.0000    50.0000 
    105. 

  105.  41 4008     15630    15726.6  wm-rh-inferiorparietal            90.2852     8.6000    60.0000   116.0000    56.0000 
    106. 

  106.  42 4009      7398     7525.0  wm-rh-inferiortemporal            77.3812     7.7107    54.0000   104.0000    50.0000 
    107. 

  107.  43 4010      2705     2732.4  wm-rh-isthmuscingulate            98.9142     8.5597    47.0000   125.0000    78.0000 
    108. 

  108.  44 4011      9983    10156.1  wm-rh-lateraloccipital            78.1418     7.7190    52.0000   100.0000    48.0000 
    109. 

  109.  45 4012      7734     7842.3  wm-rh-lateralorbitofrontal        94.8772    10.0469    55.0000   121.0000    66.0000 
    110. 

  110.  46 4013      4683     4785.4  wm-rh-lingual                     82.3820    10.2426     5.0000   106.0000   101.0000 
    111. 

  111.  47 4014      3863     3977.6  wm-rh-medialorbitofrontal         98.1002    10.2380    53.0000   129.0000    76.0000 
    112. 

  112.  48 4015      8778     8840.3  wm-rh-middletemporal              81.0685     7.8040    58.0000   105.0000    47.0000 
    113. 

  113.  49 4016      1867     1904.8  wm-rh-parahippocampal             83.8125     7.6941    33.0000   106.0000    73.0000 
    114. 

  114.  50 4017      6400     6412.7  wm-rh-paracentral                 97.5633     8.0461    69.0000   123.0000    54.0000 
    115. 

  115.  51 4018      4108     4142.4  wm-rh-parsopercularis             94.6378     8.6034    69.0000   120.0000    51.0000 
    116. 

  116.  52 4019      1185     1258.0  wm-rh-parsorbitalis               91.2270     8.5553    67.0000   118.0000    51.0000 
    117. 

  117.  53 4020      3741     3820.6  wm-rh-parstriangularis            92.2235     8.6398    62.0000   115.0000    53.0000 
    118. 

  118.  54 4021      3278     3126.6  wm-rh-pericalcarine               80.4189    10.1860     2.0000   105.0000   103.0000 
    119. 

  119.  55 4022      6324     6510.1  wm-rh-postcentral                 93.1153     8.1598    69.0000   118.0000    49.0000 
    120. 

  120.  56 4023      5398     5361.2  wm-rh-posteriorcingulate         101.1854     8.2651    55.0000   124.0000    69.0000 
    121. 

  121.  57 4024     16215    16331.1  wm-rh-precentral                  94.9124     7.8898    67.0000   119.0000    52.0000 
    122. 

  122.  58 4025     13324    13305.8  wm-rh-precuneus                   93.3879     9.3760     6.0000   120.0000   114.0000 
    123. 

  123.  59 4026      2595     2638.8  wm-rh-rostralanteriorcingulate   102.5037     8.9355    66.0000   128.0000    62.0000 
    124. 

  124.  60 4027     12200    12823.3  wm-rh-rostralmiddlefrontal        99.2802     8.2510    69.0000   125.0000    56.0000 
    125. 

  125.  61 4028     25724    26430.9  wm-rh-superiorfrontal             98.0228     8.5392    66.0000   125.0000    59.0000 
    126. 

  126.  62 4029     14527    14796.7  wm-rh-superiorparietal            93.3648     8.4590    36.0000   116.0000    80.0000 
    127. 

  127.  63 4030      7080     7339.2  wm-rh-superiortemporal            87.0751     8.0012    59.0000   112.0000    53.0000 
    128. 

  128.  64 4031      7443     7513.9  wm-rh-supramarginal               95.1417     7.9160    66.0000   117.0000    51.0000 
    129. 

  129.  65 4032       266      286.4  wm-rh-frontalpole                 97.6729     8.5151    74.0000   118.0000    44.0000 
    130. 

  130.  66 4033       660      727.9  wm-rh-temporalpole                75.6227     7.0845    57.0000    98.0000    41.0000 
    131. 

  131.  67 4034       731      706.1  wm-rh-transversetemporal          91.0451     7.8436    65.0000   110.0000    45.0000 
    132. 

  132.  68 4035     10971    10852.5  wm-rh-insula                      88.1893    11.1366    28.0000   119.0000    91.0000 
    133. 

  133.  69 5001     35588    35208.4  Left-UnsegmentedWhiteMatter       99.8964    10.8333     4.0000   132.0000   128.0000 
    134. 

  134.  70 5002     31802    31523.2  Right-UnsegmentedWhiteMatter      97.2962     9.6792     8.0000   126.0000   118.0000 
    135.